HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:9.0 nTPM
HPA Brain:68.5 nTPM
GTEx:9.0 nTPM
FANTOM5:48.8 Scaled Tags Per Million
Pig:55.0 nTPM
Mouse:19.7 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA065219
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 68.5
Sample id Sample description nTPM
Hippocampus
nTPM: 59.5
2148 Female, age 91, left hemisphere 64.9
2621 Female, age 67, right hemisphere 63.9
1898 Male, age 80, left hemisphere 61.3
1855 Male, age 76, left hemisphere 58.9
2529 Female, age 94, left hemisphere 57.1
1911 Female, age 85, right hemisphere 51.0
Dentate gyrus
nTPM: 60.7
2531 Female, age 67, both hemispheres 69.9
1927 Female, age 91, both hemispheres 66.1
2246 Female, age 85, both hemispheres 63.3
2010 Male, age 76, both hemispheres 57.0
2528 Male, age 74, both hemispheres 56.3
2530 Female, age 94, left hemisphere 51.5
Entorhinal gyrus
nTPM: 59.4
2764 Male, age 80, right hemisphere 64.9
1938 Female, age 85, left hemisphere 64.3
2613 Female, age 94, left hemisphere 60.6
2686 Male, age 75, right hemisphere 58.4
1787 Male, age 76, left hemisphere 55.7
2117 Female, age 91, right hemisphere 52.7
Hippocampus, CA1
nTPM: 66.7
2749 Male, age 80, left hemisphere 76.0
2045 Male, age 76, both hemispheres 70.9
1873 Female, age 85, both hemispheres 66.3
2527 Male, age 74, both hemispheres 62.7
2082 Female, age 91, right hemisphere 57.8
Hippocampus, CA2
nTPM: 55.7
1963 Male, age 80, left hemisphere 63.8
1892 Male, age 76, both hemispheres 57.1
2113 Female, age 91, right hemisphere 56.3
1940 Female, age 85, left hemisphere 54.8
2249 Male, age 74, both hemispheres 51.9
2437 Female, age 94, left hemisphere 50.5
Hippocampus, CA3
nTPM: 64.5
2620 Female, age 94, left hemisphere 81.6
2861 Female, age 67, both hemispheres 69.2
2137 Male, age 80, left hemisphere 68.8
2436 Male, age 74, both hemispheres 59.2
1867 Male, age 76, both hemispheres 54.6
1891 Female, age 85, both hemispheres 53.8
Parahippocampal cortex
nTPM: 61.1
1850 Male, age 80, both hemispheres 69.0
2622 Female, age 67, right hemisphere 64.0
2693 Female, age 94, both hemispheres 62.8
1933 Female, age 85, both hemispheres 62.2
2245 Female, age 91, both hemispheres 61.9
2532 Female, age 72, left hemisphere 61.7
2692 Male, age 74, both hemispheres 60.6
1990 Female, age 91, right hemisphere 59.5
2250 Female, age 67, right hemisphere 59.4
2018 Male, age 76, both hemispheres 50.1
Perirhinal gyrus
nTPM: 68.5
1794 Male, age 80, right hemisphere 73.0
1847 Female, age 91, left hemisphere 72.6
1841 Female, age 85, right hemisphere 68.2
2521 Female, age 94, right hemisphere 65.7
2848 Male, age 76, right hemisphere 62.8
Subiculum
nTPM: 54.7
2619 Male, age 74, both hemispheres 58.9
1977 Female, age 85, both hemispheres 58.0
2729 Female, age 91, right hemisphere 57.0
2438 Female, age 94, left hemisphere 56.6
1901 Male, age 80, both hemispheres 53.8
2042 Male, age 76, both hemispheres 43.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 9.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.0
Samples: 197

Max nTPM: 16.7
Min nTPM: 0.5
Std nTPM: 3.1
Median nTPM: 9.1
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 16.7
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 16.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 16.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 15.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 14.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 14.6
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 14.3
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 14.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 14.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 14.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 13.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 48.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.8
FF:10169-103B7 60 years, female 58.1
FF:10153-102I9 76 years, female 39.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 55.0
Pig sample Sample description nTPM
Subiculum
nTPM: 55.1
Samples: 4

Max nTPM: 66.2
Min nTPM: 47.6
Sample A Female 66.2
Sample B Female 53.1
Sample C Male 53.3
Sample D Male 47.6
Dorsal hippocampus
nTPM: 42.6
Samples: 4

Max nTPM: 47.0
Min nTPM: 38.1
Sample A Female 47.0
Sample B Female 46.5
Sample C Male 38.9
Sample D Male 38.1
Entorhinal cortex
nTPM: 44.8
Samples: 4

Max nTPM: 47.0
Min nTPM: 42.4
Sample A Female 44.6
Sample B Female 42.4
Sample C Male 47.0
Sample D Male 45.2
Ventral hippocampus
nTPM: 44.2
Samples: 4

Max nTPM: 52.8
Min nTPM: 40.9
Sample A Female 40.9
Sample B Female 41.7
Sample C Male 52.8
Sample D Male 41.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 19.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.7
Samples: 4

Max nTPM: 25.7
Min nTPM: 15.2
Sample A Male 18.8
Sample B Male 19.0
Sample C Female 15.2
Sample D Female 25.7
Hippocampal formation
nTPM: 14.3
Samples: 4

Max nTPM: 15.5
Min nTPM: 12.7
Sample A Male 13.9
Sample B Male 15.5
Sample C Female 14.9
Sample D Female 12.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
73811573 Antisense, RP_051212_03_D12, Mouse strain C57BL/6J (56 days, male) 3.8

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