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CLNS1A
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  • CLNS1A
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:74.4 nTPM
HPA Brain:85.2 nTPM
GTEx:74.4 nTPM
FANTOM5:93.7 Scaled Tags Per Million
Pig:86.6 nTPM
Mouse:82.1 nTPM
Allen mouse:0.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA031707Antibody HPA031708Antibody HPA032045Antibody CAB017840
Glial cells Not detectedNot detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedMediumNot detected






BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 64.4
2481 Female, age 94, left hemisphere 73.2
2846 Female, age 79, unknown 68.3
2288 Male, age 75, left hemisphere 67.4
1854 Male, age 80, left hemisphere 66.0
2290 Female, age 72, unknown 64.1
1857 Female, age 85, left hemisphere 62.6
2289 Male, age 61, right hemisphere 57.5
1781 Male, age 74, unknown 55.7
Globus pallidus, externus
nTPM: 84.0
1996 Male, age 80, right hemisphere 98.4
2772 Female, age 79, unknown 87.9
2395 Male, age 75, both hemispheres 85.4
2646 Male, age 61, right hemisphere 82.1
2567 Female, age 72, unknown 66.0
Globus pallidus, internus
nTPM: 85.2
2287 Male, age 75, right hemisphere 99.2
2483 Female, age 94, right hemisphere 95.9
2037 Male, age 80, right hemisphere 92.2
1818 Male, age 74, unknown 83.5
2778 Female, age 91, both hemispheres 82.3
2111 Female, age 85, right hemisphere 73.2
2566 Female, age 72, unknown 70.1
Nucleus accumbens
nTPM: 67.6
2391 Female, age 94, left hemisphere 79.8
2698 Female, age 72, unknown 77.0
2286 Male, age 75, left hemisphere 70.7
2824 Male, age 61, right hemisphere 66.0
1856 Female, age 91, right hemisphere 65.8
2732 Male, age 80, right hemisphere 62.7
1806 Female, age 85, left hemisphere 59.4
1783 Male, age 74, unknown 59.3
Nucleus basalis of Meynert
nTPM: 69.4
2569 Male, age 61, both hemispheres 84.2
2821 Male, age 75, both hemispheres 67.5
2393 Male, age 80, right hemisphere 65.7
2484 Female, age 94, left hemisphere 60.0
Nucleus of the diagonal band
nTPM: 64.6
1812 Female, age 91, both hemispheres 73.7
2775 Male, age 80, right hemisphere 67.1
1979 Male, age 74, unknown 63.2
2195 Female, age 85, both hemispheres 61.1
2029 Male, age 61, right hemisphere 57.8
Putamen
nTPM: 61.4
2482 Female, age 94, left hemisphere 74.1
1937 Female, age 91, right hemisphere 64.7
1829 Male, age 74, unknown 60.5
1838 Male, age 80, right hemisphere 59.5
2647 Male, age 75, left hemisphere 59.4
2466 Female, age 79, unknown 58.4
2489 Female, age 72, unknown 53.1
Septal nuclei
nTPM: 63.5
1960 Male, age 74, unknown 69.6
2031 Female, age 72, unknown 69.3
2199 Male, age 80, right hemisphere 67.5
2629 Female, age 94, right hemisphere 61.1
2009 Female, age 91, both hemispheres 60.6
2394 Male, age 61, left hemisphere 59.5
2059 Female, age 85, both hemispheres 56.9
Stria terminalis, bed nucleus
nTPM: 56.4
1974 Female, age 91, both hemispheres 59.9
2201 Male, age 74, unknown 59.3
2486 Female, age 94, both hemispheres 49.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 73.3
Samples: 246

Max nTPM: 154.8
Min nTPM: 45.7
Std nTPM: 17.1
Median nTPM: 70.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 154.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 134.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 122.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 116.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 111.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 110.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 109.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 109.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 108.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 108.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 106.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 105.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 105.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 103.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 103.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 103.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 102.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 101.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 101.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 101.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 100.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 100.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 99.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 99.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 99.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 98.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 97.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 97.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 96.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 96.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 95.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 95.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 95.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 94.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 93.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 93.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 93.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 93.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 92.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 91.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 91.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 90.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 90.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 89.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 88.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 88.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 87.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 87.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 87.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 86.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 85.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 85.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 84.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 84.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 83.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 83.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 83.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 83.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 82.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 82.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 82.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 82.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 82.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 81.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 81.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 81.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 81.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 80.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 80.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 79.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 79.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 78.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 78.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 77.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 77.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 77.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 77.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 77.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 77.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 77.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 76.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 76.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 76.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 76.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 75.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 75.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 75.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 75.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 75.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 75.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 74.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 74.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 74.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 74.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 74.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 74.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 74.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 73.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 73.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 73.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 73.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 73.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 73.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 73.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 73.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 73.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 72.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 72.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 72.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 72.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 72.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 72.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 72.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 71.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 71.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 71.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 71.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 71.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 71.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 70.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 70.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 70.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 70.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 70.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 69.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 69.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 69.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 69.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 69.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 69.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 69.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 69.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 69.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 68.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 68.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 68.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 68.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 68.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 68.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 67.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 67.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 67.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 67.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 67.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 67.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 66.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 66.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 66.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 66.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 65.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 65.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 65.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 64.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 64.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 64.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 64.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 64.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 63.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 63.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 63.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 63.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 63.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 62.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 62.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 62.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 62.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 62.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 62.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 62.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 61.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 61.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 61.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 61.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 61.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 61.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 61.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 61.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 61.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 60.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 60.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 60.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 60.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 60.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 60.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 60.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 60.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 60.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 60.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 60.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 60.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 60.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 60.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 59.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 59.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 59.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 59.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 59.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 59.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 59.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 59.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 59.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 58.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 58.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 58.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 58.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 57.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 57.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 57.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 57.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 57.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 57.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 57.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 56.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 56.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 56.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 56.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 56.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 56.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 56.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 55.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 55.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 54.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 54.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 54.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 54.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 54.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 53.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 53.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 53.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 53.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 53.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 52.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 52.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 52.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 52.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 51.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 51.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 51.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 51.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 49.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 47.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 47.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 46.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 46.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 46.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 45.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 74.4
Samples: 246

Max nTPM: 193.9
Min nTPM: 44.0
Std nTPM: 21.4
Median nTPM: 69.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 193.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 169.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 160.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 133.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 132.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 126.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 124.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 123.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 122.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 121.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 120.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 118.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 118.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 117.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 113.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 111.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 109.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 108.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 107.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 104.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 103.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 103.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 102.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 102.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 102.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 101.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 101.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 99.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 99.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 98.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 97.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 96.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 96.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 95.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 95.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 95.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 93.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 92.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 92.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 92.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 91.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 91.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 91.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 89.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 89.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 88.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 88.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 88.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 88.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 87.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 87.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 87.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 87.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 87.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 87.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 86.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 85.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 84.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 84.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 84.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 84.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 83.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 82.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 82.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 82.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 82.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 82.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 81.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 80.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 80.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 80.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 79.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 79.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 78.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 78.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 78.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 77.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 77.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 77.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 77.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 77.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 77.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 76.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 76.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 76.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 76.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 76.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 75.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 75.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 75.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 75.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 75.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 75.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 74.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 74.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 74.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 74.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 73.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 73.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 73.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 73.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 73.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 72.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 72.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 72.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 72.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 72.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 71.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 71.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 71.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 71.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 71.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 71.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 71.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 70.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 70.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 70.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 70.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 70.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 69.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 69.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 69.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 69.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 69.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 69.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 69.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 68.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 68.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 68.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 67.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 67.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 67.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 67.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 67.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 66.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 66.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 66.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 66.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 66.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 66.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 66.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 66.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 65.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 65.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 65.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 65.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 65.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 65.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 64.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 64.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 64.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 64.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 64.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 64.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 63.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 63.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 63.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 63.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 63.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 62.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 62.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 62.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 61.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 61.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 61.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 61.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 61.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 61.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 61.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 60.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 60.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 60.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 60.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 60.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 60.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 60.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 60.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 60.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 59.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 59.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 59.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 59.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 59.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 59.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 59.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 59.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 59.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 59.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 59.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 59.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 59.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 58.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 58.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 58.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 58.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 58.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 58.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 58.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 57.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 57.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 57.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 57.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 57.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 57.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 57.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 57.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 56.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 56.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 56.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 56.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 56.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 56.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 56.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 56.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 55.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 55.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 55.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 55.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 54.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 54.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 53.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 53.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 53.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 53.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 53.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 53.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 53.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 53.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 53.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 52.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 52.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 52.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 52.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 52.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 51.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 51.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 51.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 50.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 49.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 48.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 48.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 46.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 45.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 45.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 44.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 44.0
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Brain - Putamen (basal ganglia)
Average nTPM: 73.6
Samples: 205

Max nTPM: 146.3
Min nTPM: 38.4
Std nTPM: 18.2
Median nTPM: 68.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 146.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 140.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 131.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 122.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 118.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 118.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 118.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 116.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 116.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 114.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 112.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 111.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 108.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 104.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 101.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 101.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 100.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 100.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 99.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 98.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 98.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 97.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 96.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 95.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 95.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 94.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 92.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 91.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 91.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 90.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 90.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 90.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 89.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 89.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 89.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 89.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 88.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 87.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 87.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 86.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 86.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 86.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 86.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 86.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 85.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 85.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 85.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 85.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 84.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 84.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 84.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 83.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 82.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 82.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 82.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 82.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 81.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 81.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 81.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 81.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 80.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 79.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 79.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 79.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 79.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 78.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 78.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 78.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 77.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 76.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 76.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 76.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 76.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 76.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 76.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 76.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 76.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 75.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 75.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 75.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 74.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 74.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 74.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 74.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 74.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 73.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 72.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 72.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 72.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 71.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 71.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 71.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 71.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 71.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 71.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 71.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 70.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 70.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 70.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 70.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 70.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 69.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 68.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 68.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 68.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 68.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 67.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 67.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 67.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 67.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 67.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 67.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 67.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 66.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 66.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 66.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 66.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 66.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 66.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 66.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 66.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 65.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 65.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 65.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 65.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 64.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 64.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 64.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 64.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 64.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 64.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 64.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 64.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 63.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 63.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 63.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 63.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 63.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 63.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 63.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 63.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 63.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 62.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 62.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 62.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 62.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 62.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 62.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 62.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 62.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 61.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 61.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 61.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 61.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 61.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 61.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 61.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 60.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 60.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 60.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 59.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 59.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 59.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 58.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 58.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 58.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 58.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 57.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 57.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 57.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 57.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 57.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 57.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 57.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 57.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 56.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 56.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 56.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 55.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 55.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 55.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 55.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 55.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 55.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 55.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 54.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 54.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 54.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 54.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 54.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 53.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 53.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 52.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 52.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 51.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 51.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 51.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 51.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 50.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 49.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 49.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 47.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 46.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 41.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 38.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

93.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 80.3
FF:10164-103B2 76 years, female 80.3
Nucleus accumbens
Scaled Tags Per Million: 88.7
FF:10037-101F1 23-56 years, mixed 88.7
Putamen
Scaled Tags Per Million: 85.9
FF:10176-103C5 60 years, female 85.9
Globus pallidus
Scaled Tags Per Million: 93.7
FF:10175-103C4 60 years, female 105.9
FF:10161-103A8 76 years, female 81.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.6
Pig sample Sample description nTPM
Caudate
nTPM: 71.4
Samples: 4

Max nTPM: 76.4
Min nTPM: 65.2
Sample A Female 76.4
Sample B Female 67.8
Sample C Male 76.3
Sample D Male 65.2
Putamen
nTPM: 86.6
Samples: 4

Max nTPM: 100.1
Min nTPM: 66.1
Sample A Female 98.6
Sample B Female 66.1
Sample C Male 100.1
Sample D Male 81.6
Septum
nTPM: 84.5
Samples: 4

Max nTPM: 93.3
Min nTPM: 74.6
Sample A Female 93.3
Sample B Female 74.6
Sample C Male 85.7
Sample D Male 84.3
Ventral pallidum
nTPM: 78.2
Samples: 4

Max nTPM: 81.5
Min nTPM: 75.0
Sample A Female 79.8
Sample B Female 81.5
Sample C Male 75.0
Sample D Male 76.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

82.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 63.9
Samples: 4

Max nTPM: 70.5
Min nTPM: 60.1
Sample A Male 61.8
Sample B Male 60.1
Sample C Female 70.5
Sample D Female 63.3
Septum
nTPM: 82.1
Samples: 4

Max nTPM: 89.9
Min nTPM: 73.2
Sample A Male 73.2
Sample B Male 89.9
Sample C Female 84.8
Sample D Female 80.3
Ventral forebrain
nTPM: 72.7
Samples: 4

Max nTPM: 77.6
Min nTPM: 67.1
Sample A Male 69.6
Sample B Male 67.1
Sample C Female 77.6
Sample D Female 76.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.9
67881553 Antisense, RP_041018_01_E10, Mouse strain C57BL/6J (56 days, male) 1.2
294043 Antisense, RP_040617_02_F01, Mouse strain C57BL/6J (56 days, male) 0.7
Pallidum
Expression energy: 0.9
67881553 Antisense, RP_041018_01_E10, Mouse strain C57BL/6J (56 days, male) 1.2
294043 Antisense, RP_040617_02_F01, Mouse strain C57BL/6J (56 days, male) 0.6

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