We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PPP2R2C
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • PPP2R2C
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:110.7 nTPM
HPA Brain:226.9 nTPM
GTEx:110.7 nTPM
FANTOM5:210.1 Scaled Tags Per Million
Pig:118.9 nTPM
Mouse:328.4 nTPM
Allen mouse:16.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042122Antibody HPA042770
Glial cells LowNot detected
Neuronal cells HighNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

226.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 211.8
2846 Female, age 79, unknown 273.6
2290 Female, age 72, unknown 245.3
1857 Female, age 85, left hemisphere 218.1
1854 Male, age 80, left hemisphere 205.8
1781 Male, age 74, unknown 196.7
2288 Male, age 75, left hemisphere 189.0
2289 Male, age 61, right hemisphere 183.6
2481 Female, age 94, left hemisphere 182.1
Globus pallidus, externus
nTPM: 146.5
2646 Male, age 61, right hemisphere 200.1
2772 Female, age 79, unknown 152.9
2567 Female, age 72, unknown 134.4
2395 Male, age 75, both hemispheres 122.8
1996 Male, age 80, right hemisphere 122.3
Globus pallidus, internus
nTPM: 129.1
2483 Female, age 94, right hemisphere 186.7
2287 Male, age 75, right hemisphere 149.6
1818 Male, age 74, unknown 129.8
2566 Female, age 72, unknown 120.9
2778 Female, age 91, both hemispheres 108.5
2111 Female, age 85, right hemisphere 104.3
2037 Male, age 80, right hemisphere 103.6
Nucleus accumbens
nTPM: 186.0
1856 Female, age 91, right hemisphere 244.9
1783 Male, age 74, unknown 223.8
1806 Female, age 85, left hemisphere 200.3
2824 Male, age 61, right hemisphere 196.5
2698 Female, age 72, unknown 179.0
2286 Male, age 75, left hemisphere 178.0
2391 Female, age 94, left hemisphere 152.2
2732 Male, age 80, right hemisphere 113.5
Nucleus basalis of Meynert
nTPM: 180.3
2569 Male, age 61, both hemispheres 229.3
2484 Female, age 94, left hemisphere 179.6
2393 Male, age 80, right hemisphere 166.1
2821 Male, age 75, both hemispheres 146.3
Nucleus of the diagonal band
nTPM: 196.5
2775 Male, age 80, right hemisphere 213.4
2195 Female, age 85, both hemispheres 207.8
2029 Male, age 61, right hemisphere 207.2
1812 Female, age 91, both hemispheres 190.9
1979 Male, age 74, unknown 163.1
Putamen
nTPM: 226.9
2466 Female, age 79, unknown 269.4
2489 Female, age 72, unknown 242.9
2647 Male, age 75, left hemisphere 236.5
1829 Male, age 74, unknown 232.9
1838 Male, age 80, right hemisphere 224.4
1937 Female, age 91, right hemisphere 211.4
2482 Female, age 94, left hemisphere 170.5
Septal nuclei
nTPM: 173.4
1960 Male, age 74, unknown 227.8
2031 Female, age 72, unknown 204.1
2629 Female, age 94, right hemisphere 173.6
2059 Female, age 85, both hemispheres 171.7
2009 Female, age 91, both hemispheres 164.4
2394 Male, age 61, left hemisphere 139.1
2199 Male, age 80, right hemisphere 133.0
Stria terminalis, bed nucleus
nTPM: 174.0
1974 Female, age 91, both hemispheres 190.5
2486 Female, age 94, both hemispheres 188.9
2201 Male, age 74, unknown 142.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

110.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 110.7
Samples: 246

Max nTPM: 198.9
Min nTPM: 39.8
Std nTPM: 29.5
Median nTPM: 109.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 198.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 182.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 182.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 174.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 174.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 173.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 173.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 173.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 172.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 170.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 170.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 167.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 165.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 164.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 164.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 160.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 160.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 158.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 157.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 157.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 156.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 156.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 155.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 153.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 153.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 151.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 150.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 148.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 148.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 147.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 147.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 147.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 144.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 144.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 144.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 143.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 143.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 143.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 140.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 140.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 140.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 139.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 139.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 138.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 138.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 137.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 137.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 135.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 135.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 135.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 133.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 132.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 132.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 131.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 131.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 131.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 130.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 129.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 129.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 128.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 128.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 127.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 127.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 127.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 127.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 127.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 126.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 126.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 126.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 125.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 125.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 125.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 125.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 125.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 125.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 124.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 123.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 122.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 122.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 121.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 121.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 121.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 120.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 119.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 119.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 119.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 119.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 118.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 118.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 118.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 117.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 117.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 117.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 116.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 116.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 116.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 115.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 114.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 114.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 114.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 114.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 113.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 113.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 113.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 113.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 113.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 112.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 112.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 112.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 112.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 111.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 111.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 111.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 111.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 111.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 111.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 110.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 110.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 110.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 110.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 110.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 109.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 109.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 109.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 109.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 108.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 108.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 108.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 108.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 108.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 107.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 107.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 106.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 106.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 106.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 106.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 106.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 105.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 105.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 105.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 104.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 104.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 104.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 103.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 103.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 103.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 103.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 103.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 103.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 102.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 101.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 101.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 101.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 100.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 100.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 99.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 99.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 99.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 99.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 98.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 98.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 98.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 98.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 96.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 96.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 95.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 95.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 95.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 95.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 94.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 94.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 94.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 93.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 93.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 93.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 93.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 93.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 92.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 91.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 90.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 90.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 89.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 89.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 89.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 89.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 89.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 89.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 88.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 88.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 88.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 87.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 87.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 87.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 87.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 86.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 86.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 84.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 84.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 84.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 81.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 81.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 81.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 81.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 81.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 80.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 80.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 80.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 80.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 79.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 78.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 78.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 77.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 77.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 77.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 76.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 75.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 75.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 75.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 75.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 74.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 74.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 74.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 73.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 73.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 72.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 72.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 71.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 70.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 70.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 70.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 69.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 67.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 67.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 64.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 62.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 61.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 60.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 60.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 59.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 58.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 58.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 57.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 55.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 53.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 49.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 39.8
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 109.4
Samples: 246

Max nTPM: 196.2
Min nTPM: 25.4
Std nTPM: 32.7
Median nTPM: 110.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 196.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 194.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 190.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 190.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 190.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 187.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 181.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 181.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 177.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 172.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 167.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 165.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 162.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 161.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 157.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 157.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 156.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 156.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 155.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 154.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 152.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 151.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 151.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 150.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 150.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 148.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 148.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 148.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 147.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 146.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 146.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 144.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 143.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 143.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 143.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 143.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 140.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 139.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 138.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 137.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 137.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 136.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 136.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 136.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 136.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 135.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 134.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 134.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 134.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 133.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 133.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 133.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 132.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 132.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 131.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 131.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 131.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 131.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 131.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 130.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 130.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 130.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 129.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 129.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 129.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 129.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 128.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 127.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 127.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 127.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 127.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 126.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 125.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 125.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 124.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 124.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 124.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 124.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 123.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 122.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 122.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 122.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 121.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 121.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 121.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 120.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 120.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 120.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 120.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 119.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 119.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 119.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 119.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 119.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 119.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 119.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 118.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 118.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 118.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 118.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 117.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 117.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 115.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 115.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 115.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 115.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 115.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 115.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 115.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 114.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 114.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 114.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 114.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 114.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 113.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 113.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 112.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 112.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 112.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 111.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 111.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 111.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 110.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 110.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 110.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 110.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 110.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 110.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 110.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 109.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 108.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 107.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 106.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 106.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 106.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 106.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 106.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 105.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 105.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 105.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 104.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 103.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 103.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 102.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 101.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 101.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 100.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 100.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 99.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 99.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 99.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 99.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 99.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 99.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 98.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 98.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 98.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 97.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 97.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 97.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 97.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 96.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 96.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 95.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 95.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 94.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 94.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 94.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 94.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 94.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 93.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 93.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 93.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 92.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 92.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 92.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 92.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 91.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 91.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 91.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 90.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 90.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 90.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 90.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 89.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 89.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 88.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 88.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 87.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 86.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 86.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 86.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 85.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 85.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 85.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 84.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 83.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 82.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 81.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 81.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 80.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 79.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 78.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 78.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 76.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 76.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 76.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 75.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 75.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 74.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 74.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 72.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 72.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 71.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 71.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 70.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 69.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 69.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 67.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 67.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 66.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 66.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 66.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 66.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 66.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 66.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 61.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 60.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 60.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 60.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 58.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 56.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 56.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 55.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 54.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 52.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 52.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 51.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 50.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 46.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 38.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 36.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 35.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 31.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 27.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 25.4
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 105.3
Samples: 205

Max nTPM: 167.3
Min nTPM: 42.6
Std nTPM: 24.3
Median nTPM: 103.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 167.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 163.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 162.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 158.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 157.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 156.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 154.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 152.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 152.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 150.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 150.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 148.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 147.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 145.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 144.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 142.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 141.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 139.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 139.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 139.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 138.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 136.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 136.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 135.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 135.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 135.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 134.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 134.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 133.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 133.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 132.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 131.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 131.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 130.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 128.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 127.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 127.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 127.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 125.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 124.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 124.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 123.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 123.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 122.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 122.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 122.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 121.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 121.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 121.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 120.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 120.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 120.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 119.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 119.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 119.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 119.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 119.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 119.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 118.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 117.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 117.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 117.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 117.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 116.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 116.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 116.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 115.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 115.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 114.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 114.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 113.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 113.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 113.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 113.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 113.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 112.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 111.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 111.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 111.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 110.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 110.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 108.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 108.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 108.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 108.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 108.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 107.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 107.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 107.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 107.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 106.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 105.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 105.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 105.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 105.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 104.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 104.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 104.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 104.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 104.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 104.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 103.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 103.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 103.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 103.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 103.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 102.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 102.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 102.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 102.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 102.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 101.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 101.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 100.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 100.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 100.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 100.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 100.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 100.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 99.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 99.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 99.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 99.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 99.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 98.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 98.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 98.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 98.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 97.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 97.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 97.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 97.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 97.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 97.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 96.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 96.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 96.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 96.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 95.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 94.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 93.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 93.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 92.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 92.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 92.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 92.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 92.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 92.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 91.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 90.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 90.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 90.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 89.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 89.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 88.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 88.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 88.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 87.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 87.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 86.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 85.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 85.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 84.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 84.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 84.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 83.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 83.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 83.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 83.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 82.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 82.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 81.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 81.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 80.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 80.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 80.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 79.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 78.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 78.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 77.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 77.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 77.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 76.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 76.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 76.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 75.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 75.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 73.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 72.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 71.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 71.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 69.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 69.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 69.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 66.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 64.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 62.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 61.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 59.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 59.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 54.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 53.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 52.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 47.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 42.6
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

210.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 184.9
FF:10164-103B2 76 years, female 184.9
Nucleus accumbens
Scaled Tags Per Million: 210.1
FF:10037-101F1 23-56 years, mixed 210.1
Putamen
Scaled Tags Per Million: 202.0
FF:10176-103C5 60 years, female 202.0
Globus pallidus
Scaled Tags Per Million: 95.2
FF:10175-103C4 60 years, female 111.4
FF:10161-103A8 76 years, female 79.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

118.9
Pig sample Sample description nTPM
Caudate
nTPM: 107.2
Samples: 4

Max nTPM: 129.8
Min nTPM: 88.7
Sample A Female 88.7
Sample B Female 104.3
Sample C Male 129.8
Sample D Male 106.1
Putamen
nTPM: 118.9
Samples: 4

Max nTPM: 150.6
Min nTPM: 79.8
Sample A Female 79.8
Sample B Female 113.9
Sample C Male 150.6
Sample D Male 131.2
Septum
nTPM: 78.4
Samples: 4

Max nTPM: 90.6
Min nTPM: 60.1
Sample A Female 90.6
Sample B Female 88.3
Sample C Male 60.1
Sample D Male 74.4
Ventral pallidum
nTPM: 103.5
Samples: 4

Max nTPM: 108.5
Min nTPM: 98.8
Sample A Female 98.8
Sample B Female 103.3
Sample C Male 108.5
Sample D Male 103.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

328.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 328.5
Samples: 4

Max nTPM: 349.1
Min nTPM: 307.8
Sample A Male 307.8
Sample B Male 325.6
Sample C Female 331.3
Sample D Female 349.1
Septum
nTPM: 170.6
Samples: 4

Max nTPM: 181.6
Min nTPM: 163.4
Sample A Male 181.6
Sample B Male 163.4
Sample C Female 166.2
Sample D Female 171.3
Ventral forebrain
nTPM: 277.0
Samples: 4

Max nTPM: 290.8
Min nTPM: 250.5
Sample A Male 287.0
Sample B Male 250.5
Sample C Female 279.8
Sample D Female 290.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

16.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 16.2
74882698 Antisense, RP_060315_04_G04, Mouse strain C57BL/6J (56 days, male) 16.5
69817240 Antisense, RP_050510_02_H09, Mouse strain C57BL/6J (56 days, male) 16.0
Pallidum
Expression energy: 12.3
69817240 Antisense, RP_050510_02_H09, Mouse strain C57BL/6J (56 days, male) 13.3
74882698 Antisense, RP_060315_04_G04, Mouse strain C57BL/6J (56 days, male) 11.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org