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EED
HPA
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

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  • STRUCT & INT

  • EED
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

EED
Synonyms HEED, WAIT-1
Gene descriptioni

Full gene name according to HGNC.

Embryonic ectoderm development
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 11
Cytoband q14.2
Chromosome location (bp) 86201212 - 86278813
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

9
Ensembl ENSG00000074266 (version 109)
Entrez gene 8726
HGNC HGNC:3188
UniProt O75530 (UniProt - Evidence at protein level)
neXtProt NX_O75530
GeneCards EED
Antibodypedia EED antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Polycomb group (PcG) protein. Component of the PRC2/EED-EZH2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene. Also recognizes 'Lys-26' trimethylated histone H1 with the effect of inhibiting PRC2 complex methyltransferase activity on nucleosomal histone H3 'Lys-27', whereas H3 'Lys-27' recognition has the opposite effect, enabling the propagation of this repressive mark. The PRC2/EED-EZH2 complex may also serve as a recruiting platform for DNA methyltransferases, thereby linking two epigenetic repression systems. Genes repressed by the PRC2/EED-EZH2 complex include HOXC8, HOXA9, MYT1 and CDKN2A.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Chromatin regulator, Repressor
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Host-virus interaction, Transcription, Transcription regulation
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a member of the Polycomb-group (PcG) family. PcG family members form multimeric protein complexes, which are involved in maintaining the transcriptional repressive state of genes over successive cell generations. This protein interacts with enhancer of zeste 2, the cytoplasmic tail of integrin beta7, immunodeficiency virus type 1 (HIV-1) MA protein, and histone deacetylase proteins. This protein mediates repression of gene activity through histone deacetylation, and may act as a specific regulator of integrin function. Two transcript variants encoding distinct isoforms have been identified for this gene. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
EED-201
ENSP00000263360
ENST00000263360
O75530
[Direct mapping] Polycomb protein EED
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000122 [negative regulation of transcription by RNA polymerase II]
GO:0001222 [transcription corepressor binding]
GO:0003682 [chromatin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005829 [cytosol]
GO:0006325 [chromatin organization]
GO:0008047 [enzyme activator activity]
GO:0016570 [histone modification]
GO:0016571 [histone methylation]
GO:0021510 [spinal cord development]
GO:0031491 [nucleosome binding]
GO:0035098 [ESC/E(Z) complex]
GO:0042054 [histone methyltransferase activity]
GO:0042802 [identical protein binding]
GO:0045892 [negative regulation of DNA-templated transcription]
Show all
441 aa
50.2 kDa
No 0
EED-202
ENSP00000315587
ENST00000327320
O75530
[Direct mapping] Polycomb protein EED
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000122 [negative regulation of transcription by RNA polymerase II]
GO:0001222 [transcription corepressor binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005829 [cytosol]
GO:0006325 [chromatin organization]
GO:0008047 [enzyme activator activity]
GO:0016570 [histone modification]
GO:0016571 [histone methylation]
GO:0031491 [nucleosome binding]
GO:0035098 [ESC/E(Z) complex]
GO:0042054 [histone methyltransferase activity]
GO:0042802 [identical protein binding]
GO:0045892 [negative regulation of DNA-templated transcription]
Show all
400 aa
45.5 kDa
No 0
EED-203
ENSP00000338186
ENST00000351625
O75530
[Direct mapping] Polycomb protein EED
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000122 [negative regulation of transcription by RNA polymerase II]
GO:0001222 [transcription corepressor binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005829 [cytosol]
GO:0006325 [chromatin organization]
GO:0008047 [enzyme activator activity]
GO:0016570 [histone modification]
GO:0016571 [histone methylation]
GO:0031491 [nucleosome binding]
GO:0035098 [ESC/E(Z) complex]
GO:0042054 [histone methyltransferase activity]
GO:0042802 [identical protein binding]
GO:0045892 [negative regulation of DNA-templated transcription]
Show all
466 aa
53.1 kDa
No 0
EED-206
ENSP00000437318
ENST00000527888
E9PMU3
[Direct mapping] Polycomb protein EED
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0016571 [histone methylation]
GO:0035098 [ESC/E(Z) complex]
Show all
106 aa
12.4 kDa
No 0
EED-207
ENSP00000431778
ENST00000528180
E9PJK2
[Direct mapping] Polycomb protein EED
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0016571 [histone methylation]
GO:0035098 [ESC/E(Z) complex]
Show all
361 aa
40.6 kDa
No 0
EED-211
ENSP00000436084
ENST00000534595
H0YEL4
[Direct mapping] Polycomb protein EED
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0016571 [histone methylation]
GO:0035098 [ESC/E(Z) complex]
Show all
115 aa
13 kDa
No 0
EED-212
ENSP00000500834
ENST00000672825
O75530
[Direct mapping] Polycomb protein EED
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000122 [negative regulation of transcription by RNA polymerase II]
GO:0001222 [transcription corepressor binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005829 [cytosol]
GO:0006325 [chromatin organization]
GO:0008047 [enzyme activator activity]
GO:0016570 [histone modification]
GO:0016571 [histone methylation]
GO:0031491 [nucleosome binding]
GO:0035098 [ESC/E(Z) complex]
GO:0042054 [histone methyltransferase activity]
GO:0042802 [identical protein binding]
GO:0045892 [negative regulation of DNA-templated transcription]
Show all
441 aa
50.2 kDa
No 0
EED-213
ENSP00000500914
ENST00000673233
A0A5F9ZI63
[Direct mapping] Polycomb protein EED
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0016571 [histone methylation]
GO:0035098 [ESC/E(Z) complex]
Show all
501 aa
56.3 kDa
No 0
EED-214
ENSP00000516737
ENST00000707108
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Other congenital malformations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0016571 [histone methylation]
GO:0035098 [ESC/E(Z) complex]
Show all
406 aa
46.6 kDa
No 0

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