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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: High
Granular cells - nucleus: High
Molecular layer - neuropil: Not detected
Molecular layer cells - cytoplasm/membrane: High
Molecular layer cells - nucleus: High
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Not detected
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: Not detected
White matter cells - nucleus: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:9.6 nTPM
HPA Brain:35.5 nTPM
GTEx:9.6 nTPM
FANTOM5:29.4 Scaled Tags Per Million
Pig:32.6 nTPM
Mouse:1.9 nTPM
Allen mouse:0.2 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA004817Antibody HPA061417Antibody CAB013460
Bergmann glia - cytoplasm/membrane -Not detected-
Bergmann glia - nucleus -Not detected-
GLUC cells - cytoplasm/membrane -Not detected-
GLUC cells - nucleus -Not detected-
Purkinje cells Not detected-Not detected
Purkinje cells - cytoplasm/membrane -Not detected-
Purkinje cells - dendrites -Not detected-
Purkinje cells - nucleus -Not detected-
Cells in granular layer Not detected-Not detected
Cells in molecular layer Not detected-Not detected
Granular cells - cytoplasm/membrane -High-
Granular cells - nucleus -High-
Molecular layer - neuropil -Not detected-
Molecular layer cells - cytoplasm/membrane -High-
Molecular layer cells - nucleus -High-
Processes in granular layer -Not detected-
Processes in molecular layer -Not detected-
Processes in white matter -Not detected-
Synaptic glomeruli - capsule -Not detected-
Synaptic glomeruli - core -Not detected-
White matter cells - cytoplasm/membrane -Not detected-
White matter cells - nucleus -High-






CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.5
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 19.5
1788 Male, age 55, unknown 38.1
1769 Male, age 76, right hemisphere 32.9
1768 Female, age 72, unknown 21.7
2055 Female, age 91, right hemisphere 16.8
2003 Female, age 85, right hemisphere 14.5
1774 Male, age 80, left hemisphere 13.7
2006 Male, age 61, right hemisphere 10.3
2101 Male, age 74, right hemisphere 8.3
Cerebellar nuclei
nTPM: 26.9
2175 Male, age 61, right hemisphere 51.2
2882 Male, age 76, left hemisphere 35.0
2005 Male, age 80, left hemisphere 34.5
2177 Female, age 85, both hemispheres 23.3
1966 Female, age 91, left hemisphere 23.1
1879 Male, age 55, unknown 22.8
2783 Female, age 72, unknown 20.1
1871 Male, age 74, unknown 18.3
2318 Male, age 74, left hemisphere 13.9
Flocculonodular lobe
nTPM: 35.5
2004 Male, age 61, right hemisphere 124.9
1767 Male, age 76, left hemisphere 27.6
1792 Male, age 74, unknown 26.2
1765 Male, age 55, unknown 24.3
2176 Female, age 91, right hemisphere 16.4
1771 Male, age 80, left hemisphere 14.6
1835 Female, age 85, right hemisphere 14.6
Vermis
nTPM: 21.9
1825 Male, age 74, unknown 34.9
1766 Male, age 55, unknown 27.2
2460 Male, age 61, both hemispheres 27.1
1770 Male, age 76, left hemisphere 26.6
1778 Female, age 91, left hemisphere 20.1
1928 Female, age 72, unknown 19.8
2834 Male, age 80, left hemisphere 17.1
1988 Female, age 85, left hemisphere 14.1
1751 Male, age 74, right hemisphere 10.1

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

9.6
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 7.9
Samples: 215

Max nTPM: 74.9
Min nTPM: 2.9
Std nTPM: 6.2
Median nTPM: 6.6
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 74.9
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 34.3
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 27.0
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 26.7
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 22.3
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 21.4
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 21.0
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 20.0
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 18.2
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 17.9
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 15.8
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 14.2
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 14.2
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 13.9
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 13.8
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 13.7
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 13.3
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 13.0
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 12.8
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 12.4
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 12.3
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 12.1
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 11.8
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 11.8
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 11.6
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 11.5
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 11.4
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 11.4
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 11.4
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 11.3
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 11.1
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 10.9
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 10.8
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 10.7
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 10.3
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 10.3
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 9.9
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 9.8
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 9.8
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 9.5
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 9.3
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 9.2
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 9.1
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 8.9
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 8.9
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 8.8
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 8.7
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 8.7
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 8.6
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 8.6
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 8.6
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 8.5
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 8.5
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 8.5
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 8.4
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 8.4
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 8.3
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 8.3
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 8.3
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 8.2
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 8.2
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 8.2
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 8.1
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 8.1
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 8.1
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 8.0
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 8.0
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 7.9
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 7.6
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 7.6
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 7.6
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 7.6
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 7.5
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 7.5
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 7.5
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 7.5
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 7.4
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 7.4
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 7.3
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 7.2
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 7.2
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 7.2
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 7.1
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 7.1
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 7.1
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 7.1
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 7.1
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 7.0
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 7.0
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 6.9
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 6.9
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 6.9
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 6.9
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 6.8
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 6.8
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 6.8
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 6.8
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 6.8
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 6.8
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 6.8
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 6.7
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 6.7
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 6.7
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 6.7
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 6.7
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 6.6
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 6.6
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 6.6
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 6.6
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 6.6
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 6.5
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 6.5
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 6.5
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 6.4
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 6.4
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 6.3
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 6.3
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 6.3
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 6.2
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 6.2
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 6.2
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 6.1
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 6.1
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 6.0
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 5.9
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 5.9
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 5.9
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 5.9
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 5.8
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 5.8
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 5.8
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 5.8
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 5.8
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 5.8
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 5.8
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 5.8
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 5.7
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 5.7
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 5.7
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 5.7
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 5.6
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 5.6
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 5.5
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 5.5
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 5.5
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 5.5
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 5.4
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 5.4
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 5.4
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 5.4
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 5.3
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 5.3
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 5.3
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 5.3
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 5.3
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 5.3
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 5.2
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 5.2
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 5.2
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 5.1
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 5.1
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 5.0
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 5.0
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 5.0
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 4.9
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 4.9
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 4.9
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 4.9
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 4.8
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 4.8
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 4.8
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 4.7
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 4.7
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 4.7
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 4.6
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 4.6
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 4.6
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 4.5
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 4.5
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 4.5
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 4.4
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 4.4
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 4.4
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 4.4
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 4.3
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 4.3
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 4.2
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 4.1
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 4.1
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 4.1
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 4.1
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 4.0
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 4.0
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 4.0
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 4.0
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 3.9
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 3.9
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 3.9
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 3.9
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 3.8
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 3.8
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 3.7
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 3.7
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 3.7
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 3.7
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 3.6
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 3.6
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 3.5
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 3.4
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 3.3
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 3.3
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 3.2
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 3.1
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 3.0
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 2.9
Show allShow less
Brain - Cerebellum
Average nTPM: 9.6
Samples: 241

Max nTPM: 86.3
Min nTPM: 2.8
Std nTPM: 8.4
Median nTPM: 7.3
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 86.3
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 51.7
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 38.8
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 37.6
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 36.9
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 34.9
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 34.5
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 31.1
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 29.1
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 26.2
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 25.3
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 22.4
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 21.5
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 20.6
GTEX-RU72-2926-SM-2TF66 50-59 years, female 20.5
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 20.5
GTEX-11EI6-2926-SM-5985U 60-69 years, male 20.4
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 20.2
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 20.2
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 20.0
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 18.5
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 17.8
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 17.5
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 17.3
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 16.6
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 16.6
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 16.5
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 15.8
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 15.7
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 14.3
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 14.2
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 14.0
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 14.0
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 14.0
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 13.3
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 13.1
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 12.9
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 12.8
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 12.8
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 12.7
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 12.7
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 12.7
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 12.2
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 12.0
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 12.0
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 12.0
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 11.7
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 11.7
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 11.6
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 11.5
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 11.5
GTEX-145LS-3026-SM-5O99S 60-69 years, female 11.3
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 11.3
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 11.2
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 11.0
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 11.0
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 10.9
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 10.9
GTEX-1192X-3226-SM-5987D 50-59 years, male 10.8
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 10.8
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 10.7
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 10.6
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 10.6
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 10.5
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 10.5
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 10.5
GTEX-17HII-2926-SM-79OMK 50-59 years, male 10.3
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 10.3
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 10.2
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 10.1
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 10.1
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 10.1
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 10.1
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 10.1
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 10.0
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 9.8
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 9.7
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 9.7
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 9.6
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 9.5
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 9.5
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 9.4
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 9.3
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 9.3
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 9.2
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 8.9
GTEX-14PN4-3026-SM-664O4 50-59 years, male 8.9
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 8.9
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 8.8
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 8.8
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 8.7
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 8.7
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 8.6
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 8.6
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 8.6
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 8.5
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 8.5
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 8.5
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 8.5
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 8.3
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 8.2
GTEX-11ONC-3026-SM-5985W 60-69 years, male 8.1
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 8.1
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 8.1
GTEX-12126-0926-SM-5FQTW 20-29 years, male 8.0
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 8.0
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 7.9
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 7.8
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 7.7
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 7.7
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 7.7
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 7.5
GTEX-15G19-2826-SM-6M48K 60-69 years, male 7.5
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 7.5
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 7.5
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 7.4
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 7.4
GTEX-11NUK-3026-SM-5986K 50-59 years, male 7.3
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 7.3
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 7.3
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 7.3
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 7.2
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 7.2
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 7.2
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 7.1
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 7.1
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 7.1
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 7.1
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 7.1
GTEX-X261-3126-SM-4PQZC 50-59 years, male 7.0
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 6.9
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 6.9
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 6.8
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 6.7
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 6.7
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 6.7
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 6.5
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 6.5
GTEX-WL46-2826-SM-3LK81 50-59 years, male 6.5
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 6.5
GTEX-13112-2926-SM-5DUWT 50-59 years, male 6.4
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 6.4
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 6.4
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 6.3
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 6.3
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 6.3
GTEX-14E6D-2926-SM-664OP 50-59 years, male 6.3
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 6.3
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 6.3
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 6.3
GTEX-18465-2926-SM-7KFSE 50-59 years, male 6.2
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 6.2
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 6.1
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 6.1
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 6.1
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 6.0
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 6.0
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 5.9
GTEX-1B933-3026-SM-731DB 50-59 years, female 5.9
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 5.9
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 5.8
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 5.8
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 5.7
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 5.6
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 5.6
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 5.5
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 5.5
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 5.5
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 5.5
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 5.4
GTEX-14ABY-3026-SM-664NE 50-59 years, male 5.4
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 5.4
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 5.4
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 5.4
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 5.3
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 5.3
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 5.3
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 5.2
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 5.2
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 5.2
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 5.2
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 5.2
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 5.2
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 5.2
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 5.1
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 5.1
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 5.1
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 5.1
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 5.1
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 5.0
GTEX-17EVP-2926-SM-793BU 40-49 years, male 5.0
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 5.0
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 4.9
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 4.9
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 4.8
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 4.8
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 4.8
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 4.8
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 4.8
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 4.7
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 4.7
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 4.6
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 4.6
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 4.6
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 4.6
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 4.5
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 4.5
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 4.5
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 4.5
GTEX-11DYG-2926-SM-5H132 60-69 years, male 4.4
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 4.3
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 4.3
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 4.3
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 4.3
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 4.2
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 4.2
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 4.2
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 4.2
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 4.1
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 4.0
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 4.0
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 3.9
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 3.9
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 3.9
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 3.8
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 3.8
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 3.8
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 3.8
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 3.7
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 3.7
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 3.6
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 3.6
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 3.6
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 3.5
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 3.4
GTEX-144GL-2926-SM-5O99F 50-59 years, male 3.4
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 3.3
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 3.2
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 2.9
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 2.8
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 2.8
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

29.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 29.4
FF:10166-103B4 76 years, female 44.8
FF:10083-102B2 22-68 years, mixed 14.0

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

32.6
Pig sample Sample description nTPM
Cerebellum
nTPM: 32.6
Samples: 4

Max nTPM: 42.5
Min nTPM: 24.5
Sample A Female 37.3
Sample B Female 24.5
Sample C Male 26.1
Sample D Male 42.5

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1.9
Mouse sample Sample description nTPM
Cerebellum
nTPM: 1.9
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.5
Sample A Male 2.4
Sample B Male 2.1
Sample C Female 1.5
Sample D Female 1.6

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 0.2
1720 Antisense, RP_Baylor_102791, Mouse strain C57BL/6J (56 days, male) 0.2

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