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  • ACTB
CANCER LUNG CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
LUAD TCGA LUAD VALIDATION LUSC TCGA LUSC VALIDATION PROTEIN LUAD CPTAC PROTEIN LUSC CPTAC PROTEIN EXPRESSION
ANTIBODIES
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VALIDATION
Dictionary
Lung cancer
Human cancer
Lung adenocarcinoma
Lung squamous cell carcinoma
LUNG ADENOCARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

ACTB is validated prognostic, high expression is unfavorable in Lung Adenocarcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 6430.19
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 5270.8
Number of samples 497
Samples
Sample Description pTPM
TCGA-49-6761-01A 68 years, female, white, stage:Stage IIIA, alive, 354 days 14282.0
TCGA-50-6595-01A 74 years, female, white, stage:Stage IIIA, dead, 189 days 13019.9
TCGA-55-7281-01A 70 years, female, white, stage:Stage IA, alive, 872 days 12943.3
TCGA-49-4512-01A 69 years, female, white, stage:Stage IIIA, dead, 905 days 12840.9
TCGA-50-5044-01A 72 years, female, white, stage:Stage IIIB, dead, 624 days 12414.2
TCGA-49-AARQ-01A 41 years, female, black or african american, stage:Stage I, alive, 6732 days 12168.3
TCGA-55-7726-01A 72 years, female, white, stage:Stage IA, alive, 652 days 11734.7
TCGA-78-7145-01A 52 years, female, white, stage:Stage IV, dead, 826 days 11424.3
TCGA-64-1681-01A 61 years, female, white, stage:Stage IA, dead, 1167 days 11286.6
TCGA-49-4490-01A 45 years, female, white, stage:Stage IIIA, dead, 385 days 10955.3
TCGA-55-6978-01A 81 years, male, white, stage:Stage IIA, dead, 176 days 10929.3
TCGA-49-AARO-01A 39 years, female, black or african american, stage:Stage IA, alive, 3759 days 10899.3
TCGA-49-6767-01A 46 years, female, white, stage:Stage IIB, alive, 677 days 10787.1
TCGA-50-6591-01A 63 years, female, white, stage:Stage IV, dead, 119 days 10722.4
TCGA-80-5611-01A male, stage:Stage IB, alive, 2595 days 10511.0
TCGA-78-7535-01A 45 years, male, white, stage:Stage IB, dead, 949 days 10462.0
TCGA-50-6597-01A 79 years, female, white, stage:Stage IB, dead, 1268 days 10371.2
TCGA-86-8673-01A 61 years, male, white, stage:Stage IB, alive, 862 days 10370.2
TCGA-44-7661-01A 69 years, female, white, stage:Stage IB, dead, 557 days 10319.3
TCGA-55-A493-01A 54 years, female, white, stage:Stage IB, alive, 28 days 9913.7
TCGA-MP-A4TI-01A 72 years, male, white, stage:Stage IIA, dead, 429 days 9795.8
TCGA-78-7542-01A 56 years, male, white, stage:Stage IB, dead, 321 days 9601.4
TCGA-91-6829-01A 78 years, male, white, stage:Stage IB, dead, 1258 days 9567.0
TCGA-49-6745-01A 82 years, male, white, stage:Stage IIIA, alive, 522 days 9513.7
TCGA-71-6725-01A 48 years, female, asian, stage:Stage IB, alive, 256 days 9379.1
TCGA-97-8175-01A 55 years, female, white, stage:Stage IB, alive, 551 days 9283.1
TCGA-J2-A4AD-01A 61 years, female, white, stage:Stage IA, dead, 550 days 9204.0
TCGA-50-5933-01A 72 years, male, white, stage:Stage IIIB, dead, 2393 days 9182.8
TCGA-MP-A4TC-01A 77 years, male, white, stage:Stage IIIA, dead, 74 days 9078.7
TCGA-99-8025-01A 72 years, female, black or african american, stage:Stage IIIA, alive, 1060 days 9042.2
TCGA-95-8494-01A 67 years, male, white, stage:Stage IIA, alive, 84 days 9020.7
TCGA-44-7662-01A 61 years, male, white, stage:Stage IB, alive, 218 days 9017.4
TCGA-78-7146-01A 71 years, female, white, stage:Stage IIIA, dead, 173 days 8956.6
TCGA-71-8520-01A 60 years, female, asian, stage:Stage IB, dead, 210 days 8903.6
TCGA-44-8120-01A 58 years, male, black or african american, stage:Stage IB, alive, 260 days 8887.4
TCGA-L9-A443-01A 63 years, female, white, stage:Stage IA, dead, 193 days 8834.5
TCGA-MN-A4N1-01A 60 years, male, black or african american, stage:Stage IIA, alive, 827 days 8774.6
TCGA-62-8394-01A 65 years, female, white, stage:Stage IIIB, dead, 139 days 8764.2
TCGA-95-A4VN-01A 62 years, female, white, stage:Stage IIA, alive, 553 days 8701.4
TCGA-64-1679-01A 58 years, female, white, stage:Stage IIIA, alive, 2488 days 8689.2
TCGA-05-4405-01A 74 years, female, stage:Stage IB, alive, 610 days 8681.4
TCGA-49-AAR3-01A 69 years, male, black or african american, stage:Stage IIB, alive, 1893 days 8614.1
TCGA-55-6980-01A 56 years, male, white, stage:Stage IA, alive, 2109 days 8561.4
TCGA-49-4494-01A 77 years, male, white, stage:Stage IIIA, dead, 1081 days 8516.2
TCGA-69-7760-01A 73 years, male, white, stage:Stage IIB, alive, 202 days 8490.4
TCGA-95-7562-01A 71 years, male, black or african american, stage:Stage IIA, dead, 87 days 8455.2
TCGA-55-6975-01A 61 years, male, white, stage:Stage IIB, dead, 118 days 8431.5
TCGA-78-7143-01A 62 years, female, white, stage:Stage IB, dead, 4961 days 8243.4
TCGA-91-6847-01A 62 years, female, white, stage:Stage IB, alive, 842 days 8222.0
TCGA-38-4629-01A 68 years, male, white, stage:Stage IIB, dead, 864 days 8117.2
TCGA-49-AARE-01A 51 years, female, black or african american, stage:Stage IA, dead, 1229 days 8108.6
TCGA-44-2668-01A 51 years, male, white, stage:Stage IB, dead, 761 days 8080.0
TCGA-55-7911-01A 70 years, female, white, stage:Stage IA, alive, 537 days 8073.4
TCGA-97-8547-01A 78 years, female, stage:Stage IIIA, alive, 657 days 8019.9
TCGA-55-A490-01A 78 years, male, white, stage:Stage IIA, dead, 99 days 7991.8
TCGA-83-5908-01A 59 years, female, white, stage:Stage IA, alive, 824 days 7884.1
TCGA-55-8090-01A 80 years, male, white, stage:Stage IA, dead, 598 days 7824.3
TCGA-50-8459-01A 68 years, male, white, stage:Stage IIB, alive, 1119 days 7819.0
TCGA-55-6982-01A 79 years, female, white, stage:Stage IIB, dead, 995 days 7739.1
TCGA-49-4487-01A 72 years, female, white, stage:Stage IA, dead, 855 days 7618.5
TCGA-44-6774-01A 56 years, female, white, stage:Stage IIIA, alive, 658 days 7615.7
TCGA-49-4507-01A 73 years, female, white, stage:Stage IIIA, dead, 268 days 7608.6
TCGA-O1-A52J-01A 74 years, female, white, stage:Stage IA, dead, 1798 days 7599.6
TCGA-55-6979-01A 59 years, female, white, stage:Stage IIB, dead, 237 days 7577.0
TCGA-NJ-A4YG-01A 65 years, male, white, stage:Stage IB, alive, 2261 days 7527.0
TCGA-50-6593-01A 49 years, female, white, stage:Stage IIIA, dead, 336 days 7489.3
TCGA-73-4658-01A 80 years, female, white, stage:Stage IB, dead, 1600 days 7464.7
TCGA-78-7147-01A 67 years, female, white, stage:Stage IIB, dead, 586 days 7438.1
TCGA-49-4488-01A 74 years, female, white, stage:Stage IA, dead, 869 days 7433.4
TCGA-55-6712-01A 71 years, male, white, stage:Stage IIA, dead, 171 days 7431.4
TCGA-69-7979-01A 71 years, female, white, stage:Stage IB, alive, 408 days 7406.3
TCGA-95-7039-01A 54 years, female, white, stage:Stage IIB, alive, 1272 days 7378.5
TCGA-55-8089-01A 56 years, male, white, stage:Stage IA, dead, 702 days 7373.3
TCGA-44-4112-01A 60 years, female, white, stage:Stage IB, dead, 808 days 7369.6
TCGA-55-8097-01A 60 years, female, white, stage:Stage IA, alive, 476 days 7339.8
TCGA-05-4250-01A 79 years, female, stage:Stage IIIA, dead, 121 days 7337.9
TCGA-49-AAR4-01A 51 years, male, black or african american, stage:Stage IIIA, dead, 879 days 7312.9
TCGA-MN-A4N4-01A 57 years, male, white, stage:Stage IA, alive, 1175 days 7292.9
TCGA-86-A4JF-01A 56 years, male, white, stage:Stage IIB, dead, 737 days 7285.3
TCGA-MP-A4T9-01A 54 years, female, white, stage:Stage IIIA, dead, 1265 days 7239.0
TCGA-64-5781-01A 55 years, female, white, stage:Stage IB, alive, 1559 days 7231.9
TCGA-44-A47B-01A 79 years, male, white, stage:Stage IB, alive, 287 days 7225.5
TCGA-05-4427-01A 65 years, female, stage:Stage IIB, alive, 791 days 7201.3
TCGA-55-6985-01A 58 years, female, white, stage:Stage IB, alive, 1233 days 7184.3
TCGA-49-4514-01A 79 years, female, white, stage:Stage IA, alive, 1700 days 7174.0
TCGA-55-7728-01A 64 years, female, white, stage:Stage IB, alive, 704 days 7172.7
TCGA-05-4398-01A 47 years, female, stage:Stage IIIB, alive, 1431 days 7172.0
TCGA-38-4625-01A 66 years, female, white, stage:Stage IB, alive, 2973 days 7169.7
TCGA-73-7499-01A 81 years, female, white, stage:Stage IB, dead, 1531 days 7159.8
TCGA-J2-8192-01A 65 years, female, white, stage:Stage IIA, alive, 739 days 7145.0
TCGA-64-5775-01A 71 years, male, white, stage:Stage IIIA, dead, 62 days 7139.4
TCGA-55-7815-01A 76 years, male, stage:Stage IB, alive, 773 days 7139.0
TCGA-55-8302-01A 54 years, male, white, stage:Stage IB, alive, 478 days 7093.0
TCGA-55-6981-01A 53 years, female, white, stage:Stage IIIA, dead, 1379 days 7087.5
TCGA-78-8660-01A 69 years, male, stage:Stage IIB, dead, 321 days 7082.9
TCGA-62-A472-01A 70 years, male, white, stage:Stage IIB, alive, 910 days 7058.7
TCGA-50-5072-01A 74 years, male, white, stage:Stage IIIA, dead, 250 days 7025.7
TCGA-MP-A4TK-01A 56 years, female, stage:Stage IIB, dead, 582 days 7016.3
TCGA-69-7980-01A 70 years, female, white, stage:Stage I, alive, 411 days 6972.2
TCGA-05-4430-01A 59 years, female, stage:Stage IB, alive, 761 days 6950.4
TCGA-86-6562-01A 52 years, male, white, stage:Stage IIA, dead, 376 days 6912.8
TCGA-86-8279-01A 46 years, male, white, stage:Stage IIA, alive, 949 days 6850.0
TCGA-75-7027-01A male, stage:Stage IB, alive, 3059 days 6777.2
TCGA-05-4424-01A 70 years, male, stage:Stage IIB, alive, 913 days 6694.6
TCGA-44-6775-01A 72 years, female, white, stage:Stage IB, alive, 705 days 6693.8
TCGA-44-2662-01A 65 years, male, white, stage:Stage IB, alive, 1280 days 6660.1
TCGA-55-7727-01A 70 years, male, white, stage:Stage IIIA, alive, 119 days 6616.0
TCGA-86-8672-01A 59 years, male, white, stage:Stage IIB, dead, 19 days 6557.0
TCGA-86-7953-01A 69 years, female, white, stage:Stage IA, alive, 997 days 6527.7
TCGA-55-7227-01A 77 years, male, white, stage:Stage IIIA, dead, 952 days 6523.3
TCGA-MP-A4SY-01A 61 years, male, white, stage:Stage IIB, dead, 1501 days 6516.2
TCGA-86-8074-01A 62 years, female, white, stage:Stage IIA, alive, 24 days 6507.4
TCGA-55-7907-01A 77 years, male, white, stage:Stage IIA, dead, 343 days 6496.7
TCGA-86-8359-01A 52 years, male, white, stage:Stage IIIA, dead, 444 days 6470.0
TCGA-05-4415-01A 57 years, male, stage:Stage IIIB, dead, 91 days 6457.5
TCGA-49-4505-01A 61 years, female, white, stage:Stage IIB, dead, 428 days 6431.6
TCGA-05-4382-01A 68 years, male, stage:Stage IB, alive, 607 days 6428.8
TCGA-38-4628-01A 65 years, female, white, stage:Stage IIB, dead, 1492 days 6397.3
TCGA-49-6744-01A 64 years, female, white, stage:Stage IIA, alive, 1683 days 6339.4
TCGA-95-8039-01A 72 years, male, white, stage:Stage IA, alive, 830 days 6327.3
TCGA-67-6217-01A 73 years, female, white, stage:Stage IIA, alive, 422 days 6323.8
TCGA-50-5944-01A 69 years, female, white, stage:Stage IA, alive, 1750 days 6321.8
TCGA-50-5045-01A 57 years, female, black or african american, stage:'--, dead, 2174 days 6305.4
TCGA-91-6848-01A 59 years, male, white, stage:Stage IIIA, alive, 224 days 6302.2
TCGA-86-7954-01A 68 years, female, white, stage:Stage IB, alive, 605 days 6295.7
TCGA-97-7937-01A 65 years, male, white, stage:Stage IB, alive, 564 days 6281.6
TCGA-69-8453-01A 77 years, male, white, stage:Stage IIB, alive, 813 days 6220.1
TCGA-64-5815-01A 74 years, male, white, stage:Stage IIB, alive, 866 days 6208.4
TCGA-55-8299-01A 61 years, female, white, stage:Stage IA, dead, 469 days 6193.9
TCGA-53-7813-01A 51 years, female, white, stage:Stage IIIB, alive, 424 days 6191.5
TCGA-86-A456-01A 78 years, female, asian, stage:Stage IA, alive, 896 days 6174.5
TCGA-93-A4JQ-01A 49 years, male, white, stage:Stage IA, alive, 526 days 6144.3
TCGA-50-6594-01A 79 years, female, black or african american, stage:Stage IIIA, dead, 370 days 6141.2
TCGA-44-6777-01A 85 years, female, white, stage:Stage IB, dead, 987 days 6116.9
TCGA-86-8055-01A 79 years, male, white, stage:Stage IIA, dead, 124 days 6106.0
TCGA-97-8177-01A 59 years, female, white, stage:Stage IB, alive, 499 days 6056.1
TCGA-55-7724-01A 76 years, female, white, stage:Stage IB, alive, 705 days 6049.9
TCGA-73-4676-01A 45 years, male, white, stage:Stage IIA, dead, 281 days 6049.6
TCGA-97-7553-01A 58 years, female, white, stage:Stage IA, alive, 1870 days 6024.3
TCGA-91-6835-01A 81 years, female, white, stage:Stage IA, alive, 79 days 6016.6
TCGA-J2-A4AG-01A 66 years, female, white, stage:Stage IA, alive, 988 days 6013.7
TCGA-78-8655-01A 77 years, female, stage:Stage IA, alive, 2360 days 6000.2
TCGA-55-8510-01A 55 years, female, white, stage:Stage IB, alive, 539 days 5991.4
TCGA-38-4626-01A 57 years, female, white, stage:'--, alive, 3674 days 5983.6
TCGA-64-1676-01A 58 years, male, white, stage:Stage IA, alive, 1728 days 5980.6
TCGA-50-5055-01A 79 years, female, white, stage:Stage IIA, dead, 1830 days 5974.0
TCGA-97-8179-01A 72 years, male, white, stage:Stage IA, alive, 435 days 5964.1
TCGA-91-6830-01A 65 years, female, white, stage:Stage IIA, alive, 60 days 5953.8
TCGA-50-5936-01A 58 years, male, white, stage:Stage IIIA, dead, 257 days 5945.3
TCGA-44-2656-01A 59 years, male, white, stage:Stage IB, alive, 1429 days 5929.9
TCGA-99-8033-01A 74 years, female, white, stage:Stage IV, dead, 656 days 5919.1
TCGA-55-8511-01A 73 years, female, white, stage:Stage IB, alive, 552 days 5914.9
TCGA-78-7152-01A 65 years, male, white, stage:Stage IB, dead, 1215 days 5905.5
TCGA-55-8204-01A 87 years, female, white, stage:Stage IB, alive, 515 days 5903.4
TCGA-93-7347-01A 76 years, female, white, stage:Stage IA, alive, 683 days 5848.4
TCGA-55-7994-01A 81 years, male, white, stage:Stage IIB, alive, 603 days 5837.7
TCGA-55-A4DF-01A 88 years, male, white, stage:Stage IA, dead, 440 days 5832.6
TCGA-05-5715-01A 69 years, female, stage:Stage IB, alive, 62 days 5823.5
TCGA-78-7154-01A 72 years, male, white, stage:Stage IIIA, dead, 593 days 5808.9
TCGA-05-4402-01A 57 years, female, stage:Stage IV, dead, 244 days 5803.5
TCGA-49-AAQV-01A 63 years, female, black or african american, stage:Stage II, dead, 677 days 5799.7
TCGA-86-8075-01A 66 years, female, white, stage:Stage IB, dead, 694 days 5797.2
TCGA-55-8205-01A 76 years, female, white, stage:Stage IIA, alive, 599 days 5793.1
TCGA-62-A46Y-01A 70 years, female, white, stage:Stage IIIA, dead, 414 days 5783.9
TCGA-44-2665-01A 55 years, female, white, stage:Stage IIB, alive, 1301 days 5780.1
TCGA-44-5644-01A 51 years, female, white, stage:Stage IB, alive, 863 days 5779.0
TCGA-05-4417-01A 51 years, female, stage:Stage IB, alive, 455 days 5778.8
TCGA-55-8207-01A 73 years, male, white, stage:Stage IB, alive, 977 days 5777.6
TCGA-38-4627-01A 64 years, female, white, stage:Stage IIA, dead, 1147 days 5754.3
TCGA-L4-A4E6-01A 67 years, male, white, stage:Stage IA, alive, 435 days 5748.0
TCGA-38-A44F-01A 80 years, male, white, stage:Stage IB, alive, 133 days 5744.8
TCGA-50-5941-01A 55 years, female, white, stage:Stage IIIA, alive, 1474 days 5741.0
TCGA-75-5125-01A male, stage:Stage IIB, dead, 2027 days 5734.6
TCGA-75-6214-01A female, stage:Stage IIIA, dead, 1115 days 5724.5
TCGA-78-7160-01A 61 years, male, white, stage:Stage IV, dead, 697 days 5722.9
TCGA-50-5935-01A 86 years, female, white, stage:Stage IA, dead, 653 days 5716.7
TCGA-78-7540-01A 66 years, female, white, stage:Stage IB, dead, 1197 days 5716.6
TCGA-97-A4M7-01A 74 years, male, white, stage:Stage IA, alive, 629 days 5716.2
TCGA-55-A48Z-01A 60 years, female, white, stage:Stage IIIB, alive, 651 days 5715.3
TCGA-73-4662-01A 65 years, female, white, stage:Stage IA, alive, 2515 days 5708.2
TCGA-69-7974-01A 54 years, female, white, stage:Stage IIIA, alive, 184 days 5705.7
TCGA-69-7978-01A 59 years, male, white, stage:Stage IIB, alive, 134 days 5679.9
TCGA-78-7163-01A 60 years, male, white, stage:Stage IB, alive, 7248 days 5637.4
TCGA-55-A48X-01A 63 years, female, white, stage:Stage IIA, alive, 689 days 5637.3
TCGA-62-A46V-01A 78 years, female, white, stage:Stage IB, alive, 2199 days 5614.2
TCGA-55-7283-01A 76 years, female, white, stage:Stage IIIA, alive, 609 days 5608.8
TCGA-78-8662-01A 53 years, female, stage:Stage IB, dead, 3361 days 5607.5
TCGA-50-5051-01A 42 years, female, white, stage:Stage IIIA, dead, 478 days 5595.4
TCGA-86-8073-01A 58 years, male, white, stage:Stage IB, alive, 740 days 5591.9
TCGA-MN-A4N5-01A 63 years, male, white, stage:Stage IA, alive, 84 days 5585.9
TCGA-55-7903-01A 64 years, male, white, stage:Stage IA, alive, 567 days 5584.7
TCGA-86-8280-01A 54 years, female, white, stage:Stage IIA, alive, 701 days 5553.6
TCGA-69-7765-01A 56 years, male, black or african american, stage:'--, alive, 165 days 5548.8
TCGA-62-A46R-01A 54 years, female, white, stage:Stage IB, dead, 1725 days 5501.7
TCGA-99-8028-01A 50 years, female, black or african american, stage:Stage IA, alive, 1118 days 5484.6
TCGA-55-8614-01A 76 years, male, white, stage:Stage IB, alive, 536 days 5473.1
TCGA-75-7025-01A male, stage:Stage IB, alive, 3305 days 5466.1
TCGA-78-7150-01A 59 years, male, white, stage:Stage IIB, dead, 666 days 5460.0
TCGA-44-3396-01A 74 years, female, white, stage:Stage IIIA, alive, 1130 days 5458.9
TCGA-78-7155-01A 68 years, male, white, stage:Stage IB, dead, 1171 days 5449.4
TCGA-49-AAR0-01A 57 years, male, black or african american, stage:Stage IA, alive, 4765 days 5442.4
TCGA-MP-A4SW-01A 53 years, male, white, stage:Stage IIB, dead, 1778 days 5439.7
TCGA-05-4390-01A 58 years, female, stage:Stage IB, alive, 1126 days 5376.9
TCGA-55-7573-01A 72 years, female, white, stage:Stage IA, alive, 487 days 5375.6
TCGA-38-6178-01A 70 years, female, white, stage:Stage IIIA, alive, 448 days 5361.3
TCGA-44-A4SS-01A 73 years, male, white, stage:Stage IA, alive, 415 days 5358.1
TCGA-55-8096-01A 67 years, female, white, stage:Stage IB, dead, 719 days 5356.0
TCGA-NJ-A4YP-01A 52 years, male, white, stage:Stage IB, alive, 50 days 5342.5
TCGA-38-7271-01A 72 years, female, white, stage:Stage IA, dead, 800 days 5335.5
TCGA-95-7944-01A 71 years, male, white, stage:Stage IA, alive, 377 days 5334.3
TCGA-55-7574-01A 64 years, female, white, stage:Stage IB, dead, 995 days 5331.5
TCGA-67-6216-01A 57 years, female, white, stage:Stage IA, alive, 141 days 5290.6
TCGA-49-AAR9-01A 61 years, male, black or african american, stage:Stage IIB, dead, 260 days 5290.4
TCGA-86-8671-01A 72 years, female, white, stage:Stage IIB, alive, 839 days 5259.0
TCGA-55-8505-01A 62 years, male, white, stage:Stage IIIA, alive, 440 days 5251.6
TCGA-49-6742-01A 70 years, male, white, stage:Stage IIA, dead, 488 days 5232.4
TCGA-55-8091-01A 74 years, male, white, stage:Stage IB, alive, 600 days 5210.8
TCGA-44-A4SU-01A 67 years, female, white, stage:Stage IA, dead, 409 days 5191.2
TCGA-50-5931-01A 75 years, female, white, stage:Stage IB, dead, 434 days 5189.7
TCGA-44-6779-01A 50 years, female, white, stage:Stage IIB, dead, 500 days 5181.0
TCGA-L9-A743-01A 56 years, male, black or african american, stage:Stage IIA, alive, 664 days 5180.5
TCGA-78-7539-01A 75 years, female, white, stage:Stage IIA, alive, 791 days 5164.4
TCGA-50-6590-01A 72 years, female, white, stage:Stage IB, dead, 1288 days 5163.0
TCGA-50-6673-01A 84 years, female, white, stage:Stage I, dead, 22 days 5153.6
TCGA-38-4632-01A 42 years, male, black or african american, stage:Stage IV, dead, 1357 days 5151.8
TCGA-73-4668-01A 66 years, female, american indian or alaska native, stage:Stage IIB, alive, 467 days 5142.8
TCGA-55-7570-01A 60 years, male, black or african american, stage:Stage IA, alive, 824 days 5140.7
TCGA-55-8616-01A 58 years, female, white, stage:Stage IB, alive, 48 days 5122.2
TCGA-55-A57B-01A 80 years, female, black or african american, stage:Stage IA, alive, 546 days 5119.3
TCGA-95-A4VP-01A 66 years, female, white, stage:Stage IIIA, alive, 605 days 5114.5
TCGA-86-8668-01A 61 years, female, white, stage:Stage IA, alive, 423 days 5096.6
TCGA-J2-8194-01A 69 years, female, white, stage:Stage IIB, alive, 724 days 5090.4
TCGA-55-A48Y-01A 69 years, male, white, stage:Stage IIA, alive, 630 days 5084.1
TCGA-L9-A8F4-01A 64 years, female, black or african american, stage:Stage IB, alive, 476 days 5075.1
TCGA-55-8621-01A 75 years, female, white, stage:Stage IA, alive, 515 days 5072.3
TCGA-49-AARN-01A 56 years, female, black or african american, stage:Stage IA, dead, 1135 days 5063.6
TCGA-86-8585-01A 57 years, male, white, stage:Stage IB, alive, 353 days 5061.9
TCGA-44-A47G-01A 73 years, female, white, stage:Stage IA, alive, 351 days 5057.4
TCGA-49-4501-01A 67 years, female, white, stage:Stage IB, dead, 1421 days 5050.1
TCGA-97-7546-01A 76 years, female, white, stage:Stage IA, alive, 1285 days 5050.0
TCGA-53-7624-01A 40 years, female, white, stage:Stage IV, dead, 1043 days 5025.7
TCGA-99-AA5R-01A 70 years, female, black or african american, stage:Stage IA, alive, 658 days 5010.5
TCGA-75-6212-01A female, stage:Stage IIB, dead, 1516 days 5009.4
TCGA-55-A491-01A 81 years, female, white, stage:Stage IA, alive, 626 days 5008.3
TCGA-55-6983-01A 81 years, male, white, stage:Stage IIB, alive, 2823 days 5001.0
TCGA-44-7660-01A 72 years, male, white, stage:Stage IB, alive, 592 days 4998.5
TCGA-93-8067-01A 77 years, male, asian, stage:Stage IB, alive, 186 days 4996.2
TCGA-35-4123-01A 38 years, male, white, stage:Stage IA, alive, 182 days 4994.9
TCGA-05-4249-01A 67 years, male, stage:Stage IB, alive, 1523 days 4968.7
TCGA-L9-A50W-01A 75 years, male, black or african american, stage:Stage IIA, dead, 442 days 4955.9
TCGA-93-A4JP-01A 64 years, male, asian, stage:Stage IV, alive, 578 days 4941.4
TCGA-86-8358-01A 44 years, male, white, stage:Stage IB, alive, 653 days 4933.2
TCGA-55-8208-01A 73 years, female, white, stage:Stage IA, alive, 674 days 4925.5
TCGA-55-7816-01A 49 years, female, white, stage:Stage IV, dead, 468 days 4923.6
TCGA-55-8206-01A 56 years, male, white, stage:Stage IA, alive, 888 days 4919.3
TCGA-05-4397-01A 65 years, male, stage:Stage IIB, dead, 731 days 4907.6
TCGA-55-5899-01A 58 years, male, white, stage:'--, alive, 930 days 4902.7
TCGA-97-A4LX-01A 81 years, male, white, stage:Stage IB, alive, 614 days 4882.4
TCGA-67-6215-01A 52 years, female, white, stage:Stage IB, alive, 174 days 4868.2
TCGA-50-5946-01A 62 years, male, white, stage:Stage IA, alive, 1617 days 4859.5
TCGA-05-4434-01A 67 years, female, stage:Stage IV, dead, 457 days 4854.2
TCGA-55-8087-01A 59 years, female, white, stage:Stage IB, alive, 462 days 4851.0
TCGA-91-6831-01A 66 years, male, white, stage:Stage IB, alive, 310 days 4843.4
TCGA-62-8398-01A 55 years, male, white, stage:Stage IIIA, dead, 444 days 4828.2
TCGA-55-8301-01A 58 years, male, white, stage:Stage IB, alive, 534 days 4826.0
TCGA-86-8056-01A 63 years, female, white, stage:Stage IIIA, alive, 139 days 4823.3
TCGA-62-8399-01A 62 years, male, white, stage:Stage IIIA, alive, 2696 days 4813.5
TCGA-86-A4P8-01A 59 years, female, white, stage:Stage IIIA, alive, 805 days 4806.3
TCGA-MP-A4T8-01A 68 years, male, stage:Stage IIIA, dead, 161 days 4794.6
TCGA-86-7955-01A 62 years, male, white, stage:Stage IB, alive, 1072 days 4791.0
TCGA-97-8176-01A 63 years, male, white, stage:Stage IIIA, dead, 468 days 4785.6
TCGA-99-7458-01A 74 years, female, white, stage:Stage IIIA, alive, 747 days 4756.2
TCGA-MP-A4TF-01A 58 years, female, white, stage:Stage IIA, dead, 336 days 4739.2
TCGA-44-7672-01A 52 years, female, white, stage:Stage IA, alive, 719 days 4721.4
TCGA-64-5778-01A 60 years, male, white, stage:Stage IB, alive, 1305 days 4701.3
TCGA-73-4666-01A 52 years, female, white, stage:Stage IV, alive, 800 days 4690.3
TCGA-62-A46S-01A 73 years, male, white, stage:Stage IB, dead, 1653 days 4680.1
TCGA-55-6986-01A 74 years, female, white, stage:Stage IB, alive, 3261 days 4637.8
TCGA-62-A46P-01A 65 years, male, white, stage:Stage IB, dead, 594 days 4622.1
TCGA-44-3919-01A 71 years, female, white, stage:Stage IA, dead, 1026 days 4588.4
TCGA-05-4433-01A 82 years, male, stage:Stage IB, alive, 730 days 4584.1
TCGA-L9-A5IP-01A 40 years, female, black or african american, stage:Stage IV, dead, 58 days 4574.3
TCGA-53-7626-01A 76 years, female, white, stage:Stage IIA, dead, 929 days 4562.8
TCGA-97-8172-01A 75 years, female, white, stage:Stage IB, alive, 545 days 4561.7
TCGA-44-5645-01A 61 years, female, black or african american, stage:Stage IA, alive, 852 days 4506.5
TCGA-95-7567-01A 61 years, male, white, stage:Stage IIB, alive, 568 days 4504.0
TCGA-69-A59K-01A 60 years, female, black or african american, stage:Stage IIB, alive, 591 days 4495.4
TCGA-69-7763-01A 69 years, male, white, stage:Stage IA, alive, 690 days 4492.0
TCGA-62-8395-01A 80 years, female, white, stage:Stage IIB, alive, 1216 days 4490.7
TCGA-55-8506-01A 62 years, female, white, stage:Stage IIB, alive, 11 days 4488.5
TCGA-62-8402-01A 73 years, female, white, stage:Stage IIIA, dead, 1498 days 4484.3
TCGA-55-7910-01A 50 years, female, black or african american, stage:Stage IIA, alive, 1040 days 4484.2
TCGA-55-7576-01A 54 years, male, black or african american, stage:Stage IB, alive, 670 days 4470.9
TCGA-62-A46O-01A 65 years, female, white, stage:Stage IB, dead, 1454 days 4469.3
TCGA-MP-A4T6-01A 76 years, female, white, stage:Stage IIIA, dead, 1790 days 4468.7
TCGA-44-2655-01A 65 years, female, white, stage:Stage IA, alive, 1324 days 4461.1
TCGA-55-7725-01A 68 years, female, white, stage:Stage IA, alive, 442 days 4459.8
TCGA-05-4425-01A 70 years, female, stage:Stage IV, alive, 669 days 4455.2
TCGA-64-1677-01A 77 years, female, white, stage:Stage IIIA, dead, 628 days 4446.6
TCGA-93-A4JN-01A 71 years, male, white, stage:Stage IV, alive, 718 days 4443.9
TCGA-91-6840-01A 59 years, female, white, stage:Stage IA, alive, 372 days 4433.3
TCGA-91-6836-01A 52 years, female, white, stage:Stage IB, alive, 417 days 4421.8
TCGA-93-A4JO-01A 70 years, male, white, stage:Stage IA, dead, 33 days 4349.0
TCGA-78-7162-01A 75 years, male, white, stage:Stage IA, dead, 3169 days 4336.5
TCGA-49-6743-01A 81 years, female, white, stage:Stage IIIA, alive, 1621 days 4316.7
TCGA-50-6592-01A 71 years, female, white, stage:Stage IB, dead, 777 days 4297.7
TCGA-55-A494-01A 61 years, female, white, stage:Stage IB, alive, 481 days 4284.3
TCGA-55-6984-01A 71 years, female, white, stage:Stage IIB, dead, 760 days 4267.1
TCGA-05-4384-01A 66 years, male, stage:Stage IIIA, alive, 426 days 4265.6
TCGA-55-8085-01A 64 years, male, white, stage:Stage IA, alive, 904 days 4261.3
TCGA-97-A4M1-01A 52 years, female, white, stage:Stage IA, alive, 601 days 4256.7
TCGA-55-6543-01A 60 years, female, white, stage:Stage IA, alive, 435 days 4251.5
TCGA-49-AARR-01A 68 years, male, black or african american, stage:Stage IA, alive, 4992 days 4235.7
TCGA-35-4122-01A 69 years, male, white, stage:Stage IA, alive, 225 days 4216.4
TCGA-55-8092-01A 75 years, male, white, stage:Stage IIB, dead, 154 days 4203.6
TCGA-75-6206-01A male, stage:Stage IB, alive, 2590 days 4199.9
TCGA-69-7973-01A 42 years, female, white, stage:Stage IB, alive, 230 days 4198.8
TCGA-55-8619-01A 72 years, female, white, stage:Stage IIB, alive, 416 days 4154.2
TCGA-NJ-A55A-01A 76 years, female, white, stage:Stage IB, alive, 15 days 4147.4
TCGA-50-8460-01A 74 years, male, white, stage:Stage IA, alive, 829 days 4138.9
TCGA-L4-A4E5-01A 48 years, female, white, stage:Stage I, alive, 578 days 4133.6
TCGA-44-A47A-01A 78 years, female, white, stage:Stage IB, alive, 466 days 4123.6
TCGA-62-8397-01A 70 years, female, white, stage:Stage IIB, alive, 1289 days 4118.6
TCGA-05-5425-01A 68 years, male, stage:Stage IIB, alive, 882 days 4116.1
TCGA-MP-A4SV-01A 67 years, male, stage:Stage IB, dead, 2620 days 4101.9
TCGA-05-5429-01A 60 years, male, stage:Stage IIIA, dead, 275 days 4101.1
TCGA-NJ-A4YI-01A 87 years, female, white, stage:Stage IIIA, dead, 4 days 4094.7
TCGA-91-7771-01A 62 years, male, white, stage:Stage IIB, alive, 492 days 4088.0
TCGA-78-7220-01A 53 years, female, white, stage:Stage IIIA, dead, 807 days 4084.1
TCGA-44-6147-01A 67 years, female, white, stage:Stage IA, alive, 845 days 4079.6
TCGA-93-7348-01A 75 years, female, white, stage:Stage IA, alive, 531 days 4072.6
TCGA-62-A470-01A 84 years, male, white, stage:Stage IB, dead, 1194 days 4068.6
TCGA-91-6828-01A 70 years, male, white, stage:Stage IA, alive, 323 days 4065.4
TCGA-97-7938-01A 76 years, female, white, stage:Stage IA, dead, 18 days 4064.9
TCGA-50-5049-01A 70 years, male, white, stage:Stage IA, alive, 3094 days 4052.1
TCGA-MP-A4TA-01A 75 years, female, white, stage:Stage IA, dead, 950 days 4034.5
TCGA-97-A4M6-01A 45 years, female, white, stage:Stage IA, alive, 568 days 4028.5
TCGA-78-7166-01A 84 years, male, white, stage:Stage IIB, dead, 258 days 4014.1
TCGA-97-8552-01A 55 years, female, white, stage:Stage I, alive, 626 days 4010.1
TCGA-55-A492-01A 70 years, female, white, stage:Stage IA, alive, 596 days 3983.8
TCGA-55-8094-01A 51 years, male, white, stage:Stage IV, alive, 541 days 3983.6
TCGA-97-A4M3-01A 69 years, female, white, stage:Stage IA, alive, 540 days 3976.1
TCGA-44-6778-01A 59 years, male, black or african american, stage:Stage IA, alive, 1864 days 3975.3
TCGA-73-7498-01A 58 years, female, white, stage:Stage IA, alive, 1189 days 3975.1
TCGA-78-7537-01A 72 years, male, stage:Stage IB, dead, 1622 days 3962.3
TCGA-55-8512-01A 41 years, male, white, stage:Stage IV, dead, 607 days 3939.3
TCGA-97-A4M5-01A 83 years, male, white, stage:Stage IA, alive, 634 days 3938.5
TCGA-J2-A4AE-01A 77 years, female, white, stage:Stage IA, alive, 1079 days 3931.1
TCGA-05-4403-01A 76 years, male, stage:Stage IB, alive, 578 days 3924.3
TCGA-78-7148-01A 71 years, male, white, stage:Stage IIB, dead, 626 days 3919.2
TCGA-55-7914-01A 71 years, female, white, stage:Stage IIA, dead, 187 days 3916.4
TCGA-55-8620-01A 60 years, male, white, stage:Stage IV, dead, 375 days 3899.7
TCGA-78-7536-01A 69 years, male, white, stage:Stage IIIA, dead, 244 days 3894.2
TCGA-55-1596-01A 55 years, male, asian, stage:Stage IIB, alive, 2065 days 3887.2
TCGA-91-A4BD-01A 78 years, male, white, stage:Stage IIA, alive, 603 days 3877.5
TCGA-99-8032-01A 61 years, male, white, stage:Stage IA, alive, 44 days 3872.8
TCGA-69-8253-01A 59 years, female, black or african american, stage:Stage IIA, alive, 426 days 3870.0
TCGA-55-7995-01A 73 years, female, white, stage:Stage IA, alive, 889 days 3865.4
TCGA-97-A4M2-01A 66 years, male, white, stage:Stage IA, alive, 624 days 3846.2
TCGA-55-1594-01A 68 years, male, white, stage:Stage IIIA, alive, 1178 days 3830.5
TCGA-50-7109-01A 60 years, male, white, stage:Stage IA, dead, 308 days 3826.7
TCGA-44-7669-01A 59 years, male, black or african american, stage:Stage IIA, dead, 574 days 3802.9
TCGA-73-4670-01A 69 years, female, white, stage:Stage IV, alive, 131 days 3802.1
TCGA-97-7554-01A 83 years, female, white, stage:Stage IIIA, alive, 775 days 3796.5
TCGA-80-5608-01A female, stage:Stage IA, alive, 2832 days 3792.3
TCGA-44-7671-01A 64 years, male, black or african american, stage:Stage IB, alive, 889 days 3785.5
TCGA-78-7149-01A 71 years, male, white, stage:Stage IIIB, alive, 3940 days 3781.0
TCGA-44-3398-01A 77 years, female, white, stage:Stage IA, alive, 1163 days 3765.6
TCGA-97-7547-01A 67 years, female, white, stage:Stage IB, alive, 1965 days 3753.6
TCGA-44-6146-01A 64 years, male, white, stage:Stage IIB, alive, 728 days 3753.3
TCGA-44-2659-01A 65 years, female, white, stage:Stage IIB, alive, 1367 days 3748.4
TCGA-86-8278-01A 63 years, female, white, stage:Stage IIB, alive, 944 days 3713.6
TCGA-44-7670-01A 47 years, female, white, stage:Stage IIA, alive, 882 days 3705.4
TCGA-55-6968-01A 61 years, male, white, stage:Stage IV, dead, 1293 days 3687.9
TCGA-86-A4P7-01A 63 years, female, white, stage:Stage IB, alive, 415 days 3685.1
TCGA-44-6145-01A 62 years, female, white, stage:Stage IA, alive, 595 days 3669.9
TCGA-55-8615-01A 67 years, male, white, stage:Stage IIIA, alive, 446 days 3664.4
TCGA-86-7713-01A 70 years, male, white, stage:Stage IIA, alive, 1157 days 3649.9
TCGA-73-4659-01A 66 years, male, white, stage:Stage IIIA, dead, 711 days 3648.0
TCGA-55-1592-01A 65 years, male, white, stage:Stage IA, dead, 701 days 3637.7
TCGA-78-7161-01A 69 years, female, white, stage:Stage IIB, dead, 291 days 3634.7
TCGA-73-A9RS-01A 41 years, male, black or african american, stage:Stage IIB, dead, 340 days 3626.3
TCGA-55-6987-01A 77 years, male, white, stage:Stage IA, alive, 2137 days 3620.5
TCGA-05-4389-01A 70 years, male, stage:Stage IA, alive, 1369 days 3614.4
TCGA-67-3772-01A 82 years, female, white, stage:Stage IB, alive, 573 days 3604.7
TCGA-97-7941-01A 72 years, female, white, stage:Stage IA, alive, 484 days 3598.2
TCGA-05-5423-01A 65 years, male, stage:Stage IIB, alive, 151 days 3595.4
TCGA-50-5930-01A 47 years, male, white, stage:Stage IIIA, dead, 282 days 3580.9
TCGA-73-4675-01A 59 years, male, white, stage:Stage IIIA, dead, 922 days 3579.9
TCGA-44-7659-01A 70 years, male, white, stage:Stage IA, alive, 691 days 3579.0
TCGA-44-8119-01A 73 years, male, white, stage:Stage IIB, alive, 285 days 3570.6
TCGA-64-5774-01A 60 years, male, white, stage:Stage IB, alive, 2676 days 3570.2
TCGA-44-A479-01A 73 years, female, black or african american, stage:Stage IB, alive, 486 days 3569.8
TCGA-55-8507-01A 53 years, male, white, stage:Stage IA, alive, 418 days 3542.2
TCGA-91-6849-01A 75 years, female, black or african american, stage:Stage IIIA, alive, 35 days 3540.1
TCGA-05-4426-01A 71 years, male, stage:Stage IB, alive, 791 days 3536.8
TCGA-38-4631-01A 72 years, female, white, stage:Stage IB, dead, 354 days 3535.3
TCGA-86-8674-01A 50 years, male, white, stage:Stage IIA, alive, 806 days 3529.4
TCGA-75-5147-01A female, stage:Stage IB, alive, 1333 days 3524.2
TCGA-50-5932-01A 75 years, male, white, stage:Stage IIB, dead, 1235 days 3520.1
TCGA-55-8513-01A 77 years, female, white, stage:Stage IIB, alive, 791 days 3515.5
TCGA-86-7701-01A 66 years, male, white, stage:Stage IV, alive, 947 days 3496.8
TCGA-MP-A4T7-01A 75 years, female, stage:Stage IV, dead, 167 days 3494.2
TCGA-95-A4VK-01A 74 years, female, white, stage:Stage IIIA, alive, 651 days 3491.8
TCGA-44-7667-01A 49 years, female, white, stage:Stage IIB, alive, 1097 days 3468.4
TCGA-MP-A4TJ-01A 62 years, female, stage:Stage IA, dead, 339 days 3445.0
TCGA-78-7159-01A 60 years, female, white, stage:Stage IA, alive, 1974 days 3424.9
TCGA-86-7714-01A 61 years, female, black or african american, stage:Stage IIIA, dead, 625 days 3415.0
TCGA-69-7761-01A 84 years, male, white, stage:Stage IB, alive, 186 days 3405.0
TCGA-MP-A4T4-01A 68 years, female, white, stage:Stage IIB, dead, 2617 days 3403.9
TCGA-MP-A4TD-01A 71 years, male, white, stage:Stage IIIA, dead, 307 days 3386.3
TCGA-NJ-A7XG-01A 49 years, male, black or african american, stage:Stage IIIA, alive, 617 days 3360.4
TCGA-44-6776-01A 60 years, female, white, stage:Stage IA, alive, 2616 days 3344.4
TCGA-78-7153-01A 65 years, female, white, stage:Stage IB, alive, 3635 days 3340.8
TCGA-L9-A444-01A 60 years, female, white, stage:Stage IA, alive, 307 days 3339.7
TCGA-86-A4D0-01A 48 years, male, white, stage:Stage IIA, dead, 116 days 3336.6
TCGA-95-7947-01A 67 years, male, white, stage:Stage IA, alive, 477 days 3335.9
TCGA-91-A4BC-01A 59 years, male, white, stage:Stage IIA, alive, 44 days 3327.1
TCGA-78-8648-01A 58 years, female, stage:Stage IIB, dead, 1209 days 3323.7
TCGA-55-8514-01A 70 years, female, black or african american, stage:Stage IB, alive, 520 days 3304.0
TCGA-97-7552-01A 70 years, male, white, stage:Stage IB, alive, 1932 days 3297.0
TCGA-55-6971-01A 59 years, female, white, stage:Stage IB, alive, 1400 days 3294.9
TCGA-MP-A4TH-01A 70 years, female, white, stage:Stage IA, alive, 741 days 3277.2
TCGA-49-AAR2-01A 64 years, male, black or african american, stage:Stage IB, alive, 2224 days 3256.2
TCGA-69-7764-01A 75 years, male, white, stage:Stage IA, alive, 414 days 3250.0
TCGA-97-A4M0-01A 60 years, female, white, stage:Stage IB, alive, 652 days 3234.5
TCGA-4B-A93V-01A 52 years, female, black or african american, stage:Stage IA, dead, 300 days 3234.3
TCGA-55-8203-01A 69 years, female, white, stage:Stage IA, alive, 547 days 3225.3
TCGA-78-8640-01A 59 years, male, stage:Stage IIA, alive, 7062 days 3224.5
TCGA-78-7633-01A 67 years, male, white, stage:Stage IB, dead, 1528 days 3202.3
TCGA-44-8117-01A 54 years, female, white, stage:Stage IB, alive, 385 days 3199.8
TCGA-05-4420-01A 41 years, male, stage:Stage IB, alive, 912 days 3195.0
TCGA-55-A4DG-01A 71 years, male, white, stage:Stage IA, alive, 608 days 3129.6
TCGA-44-3918-01A 60 years, female, white, stage:Stage IA, alive, 1036 days 3120.3
TCGA-55-6972-01A 72 years, male, white, stage:Stage IB, dead, 1632 days 3118.8
TCGA-78-7158-01A 59 years, female, white, stage:Stage IIIB, dead, 179 days 3097.2
TCGA-69-8254-01A 85 years, male, white, stage:'--, alive, 409 days 3058.2
TCGA-67-3773-01A 84 years, female, white, stage:Stage IB, alive, 427 days 3045.6
TCGA-97-8174-01A 67 years, male, white, stage:Stage IIA, dead, 164 days 3038.4
TCGA-50-5939-01A 85 years, male, white, stage:Stage IB, dead, 460 days 3033.6
TCGA-50-8457-01A 63 years, female, black or african american, stage:Stage IA, alive, 1125 days 3032.0
TCGA-78-7156-01A 62 years, male, white, stage:Stage IV, dead, 976 days 2999.0
TCGA-44-2657-01A 74 years, female, white, stage:Stage IB, alive, 1351 days 2972.8
TCGA-86-7711-01A 70 years, male, white, stage:Stage IIA, dead, 1046 days 2966.7
TCGA-62-A471-01A 64 years, male, white, stage:Stage IIB, alive, 1246 days 2964.4
TCGA-05-4422-01A 68 years, male, stage:Stage IB, alive, 365 days 2963.1
TCGA-95-7948-01A 42 years, female, white, stage:Stage IB, alive, 476 days 2949.3
TCGA-53-A4EZ-01A 63 years, male, white, stage:Stage IIA, alive, 1071 days 2934.8
TCGA-49-4486-01A 72 years, male, white, stage:Stage IA, dead, 2318 days 2920.5
TCGA-75-5146-01A male, stage:Stage IB, alive, 2368 days 2914.9
TCGA-05-4396-01A 76 years, male, stage:Stage IIIB, dead, 303 days 2882.2
TCGA-44-2661-01A 69 years, female, white, stage:Stage IA, alive, 1159 days 2875.6
TCGA-49-4510-01A 51 years, female, black or african american, stage:Stage IIB, dead, 896 days 2855.8
TCGA-44-6148-01A 60 years, male, white, stage:Stage IA, alive, 704 days 2823.8
TCGA-MP-A4TE-01A 56 years, male, white, stage:Stage IIA, dead, 896 days 2818.0
TCGA-05-4432-01A 66 years, male, stage:Stage IIB, alive, 761 days 2812.3
TCGA-NJ-A55O-01A 56 years, female, white, stage:Stage IIA, alive, 13 days 2811.0
TCGA-50-5068-01A 59 years, female, white, stage:Stage IIB, dead, 1499 days 2800.1
TCGA-50-5066-01A 72 years, male, black or african american, stage:Stage IB, alive, 1442 days 2783.0
TCGA-97-8171-01A 81 years, male, asian, stage:Stage IV, alive, 568 days 2780.7
TCGA-91-8497-01A 75 years, female, white, stage:Stage IA, dead, 434 days 2768.4
TCGA-78-7167-01A 77 years, male, white, stage:Stage IV, dead, 2681 days 2716.9
TCGA-86-8076-01A 42 years, male, white, stage:Stage IA, alive, 993 days 2677.3
TCGA-95-7043-01A 63 years, female, white, stage:Stage IA, dead, 503 days 2666.3
TCGA-67-3771-01A 77 years, female, black or african american, stage:Stage IA, alive, 610 days 2632.7
TCGA-NJ-A4YF-01A 50 years, female, black or african american, stage:Stage IA, alive, 2161 days 2613.6
TCGA-86-6851-01A 73 years, female, white, stage:Stage IIA, alive, 179 days 2611.3
TCGA-91-8499-01A 76 years, female, white, stage:Stage IA, alive, 36 days 2576.0
TCGA-67-3774-01A 73 years, female, white, stage:Stage IB, alive, 385 days 2563.0
TCGA-55-6970-01A 67 years, female, white, stage:Stage IIIA, dead, 464 days 2526.9
TCGA-64-5779-01A 61 years, male, white, stage:Stage IIIA, alive, 864 days 2499.0
TCGA-91-8496-01A 63 years, female, white, stage:Stage IB, alive, 505 days 2437.8
TCGA-67-3770-01A 70 years, female, white, stage:Stage IA, alive, 610 days 2405.4
TCGA-86-8054-01A 61 years, male, white, stage:Stage IIB, alive, 1148 days 2379.6
TCGA-73-4677-01A 74 years, male, white, stage:'--, dead, 38 days 2375.6
TCGA-69-8255-01A 71 years, male, white, stage:Stage IA, alive, 129 days 2373.5
TCGA-05-4418-01A 69 years, male, stage:Stage IIIA, dead, 274 days 2354.1
TCGA-S2-AA1A-01A 68 years, female, black or african american, stage:Stage IA, alive, 513 days 2337.9
TCGA-50-5942-01A 67 years, female, white, stage:Stage IA, alive, 1847 days 2307.7
TCGA-55-6642-01A 63 years, male, white, stage:Stage IB, alive, 2449 days 2305.3
TCGA-L9-A7SV-01A 69 years, male, black or african american, stage:Stage IIA, alive, 565 days 2298.3
TCGA-44-5643-01A 53 years, male, black or african american, stage:Stage IIIA, alive, 1013 days 2201.5
TCGA-NJ-A4YQ-01A 69 years, female, white, stage:Stage IA, alive, 1432 days 2198.2
TCGA-44-2666-01A 43 years, male, white, stage:Stage IB, dead, 97 days 2189.3
TCGA-49-4506-01A 68 years, female, white, stage:Stage IIB, dead, 999 days 2177.0
TCGA-MP-A5C7-01A 76 years, female, white, stage:Stage IB, alive, 2248 days 2174.6
TCGA-64-1680-01A 63 years, male, white, stage:Stage IV, alive, 1126 days 2150.1
TCGA-55-8508-01A 60 years, female, black or african american, stage:Stage IIA, alive, 617 days 2087.9
TCGA-35-5375-01A 61 years, male, white, stage:Stage IIIA, alive, 264 days 2076.1
TCGA-86-8669-01A 64 years, male, white, stage:Stage IA, alive, 938 days 2052.4
TCGA-44-3917-01A 33 years, female, white, stage:Stage IB, alive, 1183 days 1992.2
TCGA-NJ-A55R-01A 67 years, male, white, stage:Stage IA, alive, 603 days 1721.7
TCGA-05-5428-01A 57 years, male, stage:Stage IIA, alive, 670 days 1717.3
TCGA-35-3615-01A 57 years, male, white, stage:Stage IB, alive, 14 days 1716.6
TCGA-05-5420-01A 67 years, male, stage:Stage IIIA, alive, 457 days 1476.7
TCGA-64-1678-01A 70 years, female, white, stage:'--, alive, 1189 days 1261.6
TCGA-38-4630-01A 75 years, female, white, stage:Stage IB, dead, 1073 days 867.9
Show allShow less
LUNG ADENOCARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

ACTB is validated prognostic, high expression is unfavorable in Lung Adenocarcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 3630.49
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 3647.5
Number of samples 105
Samples
Sample Description pTPM
L766 59 years, male, stage:Stage IB, alive, 1793 days 7401.3
L867 62 years, female, stage:Stage IIIA, dead, 317 days 6288.4
L621 79 years, female, stage:Stage IIIA, dead, 1487 days 5943.5
L458 76 years, female, stage:Stage IA, dead, 223 days 5840.7
L890 56 years, female, stage:Stage IIB, dead, 1264 days 5735.5
L619 68 years, female, stage:Stage IIIA, dead, 1905 days 5627.8
L400 78 years, male, stage:Stage IIA, dead, 1233 days 5446.3
L764 66 years, male, stage:Stage IIIA, alive, 1684 days 5386.4
L749 49 years, female, stage:Stage IIIA, dead, 189 days 5347.8
L616 54 years, male, stage:Stage IA, dead, 410 days 5308.6
L827 70 years, male, stage:Stage IIB, dead, 1105 days 4866.5
L703 71 years, male, stage:Stage IIA, dead, 1137 days 4861.0
L569 76 years, female, stage:Stage IA, alive, 2531 days 4811.9
L682 64 years, female, stage:Stage IIB, dead, 840 days 4807.2
L620 70 years, female, stage:Stage IIIA, dead, 338 days 4751.4
L871 74 years, male, stage:Stage IB, dead, 873 days 4711.3
L738 74 years, female, stage:Stage IB, dead, 1314 days 4706.3
L768 60 years, male, stage:Stage IIIA, dead, 472 days 4696.9
L832 65 years, female, stage:Stage IA, alive, 2145 days 4605.2
L875 69 years, female, stage:Stage IA, alive, 1675 days 4578.7
L511 56 years, female, stage:Stage IIIA, alive, 2942 days 4575.8
L601 75 years, male, stage:Stage IB, dead, 2068 days 4499.8
L541 70 years, female, stage:Stage IIIA, dead, 915 days 4497.7
L404 74 years, female, stage:Stage IIA, dead, 2318 days 4458.2
L532 69 years, female, stage:Stage IA, dead, 301 days 4426.3
L530 76 years, female, stage:Stage IIA, dead, 308 days 4411.3
L752 65 years, male, stage:Stage IIIA, alive, 1647 days 4386.7
L546 57 years, male, stage:Stage IA, dead, 973 days 4345.4
L877 70 years, female, stage:Stage IA, alive, 1599 days 4273.6
L613 72 years, male, stage:Stage IIIA, dead, 19 days 4258.0
L695 68 years, female, stage:Stage IB, dead, 1762 days 4247.3
L531 74 years, male, stage:Stage IB, dead, 928 days 4177.0
L462 67 years, male, stage:Stage IIIA, dead, 568 days 4166.2
L879 75 years, male, stage:Stage IV, dead, 873 days 4084.0
L663 62 years, female, stage:Stage IB, alive, 2018 days 4072.7
L816 73 years, female, stage:Stage IIA, dead, 353 days 4043.4
L826 45 years, female, stage:Stage IV, dead, 935 days 4011.9
L688 57 years, male, stage:Stage IIIA, dead, 789 days 3943.7
L728 77 years, male, stage:Stage IIB, dead, 1128 days 3928.9
L802 62 years, female, stage:Stage IA, dead, 773 days 3886.0
L585 70 years, female, stage:Stage IIA, dead, 402 days 3882.9
L617 68 years, male, stage:Stage IIIA, dead, 238 days 3832.8
L678 65 years, female, stage:Stage IB, dead, 1114 days 3816.1
L885 62 years, female, stage:Stage IA, alive, 1618 days 3779.1
L778 65 years, female, stage:Stage IA, alive, 1600 days 3770.7
L887 77 years, male, stage:Stage IA, dead, 374 days 3762.8
L746 64 years, female, stage:Stage IIIA, dead, 594 days 3630.5
L828 68 years, female, stage:Stage IIB, alive, 2222 days 3624.4
L413 72 years, female, stage:Stage IIIA, dead, 313 days 3615.7
L599 80 years, male, stage:Stage IB, dead, 2083 days 3538.1
L493 56 years, female, stage:Stage IIB, alive, 2945 days 3479.6
L566 58 years, male, stage:Stage IB, alive, 2489 days 3432.6
L626 76 years, female, stage:Stage IA, dead, 1994 days 3422.2
L605 74 years, female, stage:Stage IA, alive, 2460 days 3420.0
L446 71 years, female, stage:Stage IIB, dead, 415 days 3418.1
L557 81 years, female, stage:Stage IB, alive, 2580 days 3382.8
L607 59 years, male, stage:Stage IB, alive, 2572 days 3360.0
L731 59 years, female, stage:Stage IA, dead, 964 days 3356.1
L567 83 years, female, stage:Stage IIIA, dead, 1299 days 3312.1
L872 71 years, female, stage:Stage IA, alive, 1793 days 3265.3
L543 65 years, male, stage:Stage IA, alive, 2711 days 3215.5
L662 66 years, male, stage:Stage IA, dead, 865 days 3213.9
L551 62 years, male, stage:Stage IA, alive, 2924 days 3160.0
L773 64 years, female, stage:Stage IV, dead, 311 days 3149.3
L782 73 years, female, stage:Stage IIB, alive, 3371 days 3106.2
L874 56 years, female, stage:Stage IIIA, alive, 1733 days 3104.7
L850 77 years, male, stage:Stage IIIA, dead, 997 days 3098.8
L814 73 years, male, stage:Stage IIIA, alive, 2466 days 3093.4
L455 52 years, female, stage:Stage IA, alive, 3315 days 3077.0
L810 64 years, female, stage:Stage IIIA, dead, 625 days 3064.1
L593 78 years, male, stage:Stage IA, dead, 2436 days 2985.3
L596 74 years, female, stage:Stage IA, alive, 2319 days 2977.6
L851 70 years, male, stage:Stage IB, dead, 1315 days 2976.3
L683 77 years, female, stage:Stage IIA, dead, 612 days 2968.2
L735 75 years, female, stage:Stage IA, alive, 1830 days 2955.6
L439 80 years, male, stage:Stage IIB, dead, 2773 days 2938.7
L638 65 years, male, stage:Stage IA, alive, 2076 days 2907.3
L630 65 years, female, stage:Stage IA, dead, 1733 days 2904.1
L800 66 years, female, stage:Stage IA, dead, 2417 days 2895.5
L873 62 years, female, stage:Stage IA, alive, 1740 days 2892.1
L565 59 years, female, stage:Stage IB, dead, 543 days 2876.0
L440 80 years, male, stage:Stage IIB, dead, 651 days 2860.2
L808 48 years, female, stage:Stage IA, alive, 3001 days 2819.2
L484 64 years, female, stage:Stage IA, alive, 2895 days 2816.3
L673 74 years, female, stage:Stage IA, dead, 568 days 2802.2
L603 70 years, female, stage:Stage IB, dead, 972 days 2802.0
L831 62 years, female, stage:Stage IB, alive, 2152 days 2771.6
L561 62 years, female, stage:Stage IA, alive, 2543 days 2711.6
L602 69 years, female, stage:Stage IA, alive, 2277 days 2662.8
L689 69 years, male, stage:Stage IA, alive, 1943 days 2624.9
L791 66 years, female, stage:Stage IIIA, dead, 368 days 2589.7
L504 65 years, female, stage:Stage IA, dead, 1295 days 2587.4
L880 75 years, female, stage:Stage IA, alive, 1767 days 2578.7
L829 76 years, male, stage:Stage IA, alive, 2173 days 2557.7
L865 75 years, female, stage:Stage IIB, alive, 1927 days 2387.3
L656 58 years, male, stage:Stage IA, alive, 2227 days 2299.0
L725 64 years, female, stage:Stage IA, alive, 1830 days 2293.5
L606 55 years, male, stage:Stage IA, alive, 2336 days 2222.7
L710 72 years, female, stage:Stage IIA, alive, 1775 days 2166.6
L842 62 years, female, stage:Stage IB, alive, 2005 days 2129.9
L545 60 years, female, stage:Stage IA, alive, 2874 days 2090.5
L838 71 years, female, stage:Stage IA, dead, 1005 days 2067.4
L612 80 years, female, stage:Stage IIIA, alive, 2410 days 1855.7
L401 74 years, male, stage:Stage IIIA, dead, 1888 days 1664.3
L473 66 years, female, stage:Stage IA, alive, 3021 days 1553.0
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

ACTB is not prognostic in Lung Squamous Cell Carcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 3271.88
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 4550.0
Number of samples 489
Samples
Sample Description pTPM
TCGA-77-8130-01A 69 years, male, stage:Stage IIB, alive, 4765 days 17113.8
TCGA-34-A5IX-01A 80 years, male, white, stage:Stage IIB, alive, 1031 days 13921.5
TCGA-56-8201-01A 74 years, male, white, stage:Stage IIB, dead, 397 days 10479.5
TCGA-85-8479-01A 66 years, male, white, stage:Stage IA, alive, 468 days 10474.1
TCGA-66-2755-01A 63 years, male, stage:Stage IB, alive, 28 days 10374.7
TCGA-77-7138-01A 67 years, male, stage:Stage IB, dead, 340 days 9926.3
TCGA-NK-A5CT-01A 70 years, male, white, stage:Stage IA, alive, 1997 days 9519.8
TCGA-94-7033-01A 73 years, male, white, stage:Stage IB, alive, 640 days 9519.2
TCGA-LA-A7SW-01A 71 years, male, black or african american, stage:Stage IIIA, dead, 408 days 9391.1
TCGA-77-A5G1-01A 75 years, male, stage:Stage IIIA, alive, 4026 days 9350.6
TCGA-22-1017-01A 62 years, male, white, stage:Stage IA, dead, 1485 days 8984.1
TCGA-21-1079-01A 71 years, male, white, stage:Stage IIIA, dead, 965 days 8913.2
TCGA-77-7335-01A 62 years, female, white, stage:Stage IIIB, dead, 2133 days 8861.7
TCGA-98-8020-01A 56 years, female, black or african american, stage:Stage IIIA, dead, 84 days 8847.7
TCGA-37-A5EL-01A 53 years, male, white, stage:Stage IIB, dead, 1143 days 8834.1
TCGA-43-6771-01A 85 years, male, white, stage:Stage IB, dead, 166 days 8500.1
TCGA-77-8138-01A 74 years, male, stage:Stage IB, dead, 539 days 8454.6
TCGA-21-A5DI-01A 77 years, male, white, stage:Stage IA, alive, 979 days 8381.8
TCGA-63-6202-01A male, stage:Stage IIA, alive, 1602 days 8296.6
TCGA-O2-A52Q-01A 44 years, female, white, stage:Stage III, dead, 113 days 8286.5
TCGA-46-3769-01A 57 years, male, white, stage:'--, alive, 135 days 8238.6
TCGA-34-5236-01A 60 years, male, white, stage:Stage IIB, dead, 276 days 8208.1
TCGA-70-6722-01A 47 years, male, asian, stage:Stage IIIA, alive, 367 days 8151.9
TCGA-43-5670-01A 70 years, male, white, stage:Stage IIA, alive, 849 days 8075.6
TCGA-92-8063-01A 52 years, male, white, stage:Stage IIIA, alive, 122 days 7964.2
TCGA-85-A4PA-01A 61 years, male, white, stage:Stage IB, alive, 741 days 7938.8
TCGA-21-5783-01A 76 years, male, white, stage:Stage IB, dead, 2680 days 7875.3
TCGA-85-A50M-01A 47 years, male, asian, stage:Stage IIA, dead, 826 days 7813.4
TCGA-85-8481-01A 70 years, male, white, stage:Stage IIB, dead, 236 days 7710.4
TCGA-63-A5MH-01A 68 years, male, stage:Stage IA, alive, 2026 days 7697.2
TCGA-22-4596-01A 69 years, female, white, stage:Stage IB, dead, 17 days 7681.2
TCGA-NC-A5HM-01A 76 years, male, white, stage:Stage IB, alive, 1212 days 7337.8
TCGA-60-2708-01A 64 years, female, white, stage:Stage IIB, alive, 2447 days 7306.3
TCGA-66-2734-01A 62 years, female, stage:Stage IB, alive, 1311 days 7274.0
TCGA-56-8624-01A 84 years, male, white, stage:Stage IIB, alive, 420 days 7271.5
TCGA-85-A4QQ-01A 68 years, male, white, stage:Stage IB, dead, 927 days 7162.4
TCGA-85-6175-01A 63 years, female, white, stage:Stage IIB, dead, 294 days 7142.9
TCGA-60-2720-01A 60 years, female, white, stage:Stage IB, alive, 97 days 7124.9
TCGA-60-2726-01A 56 years, male, white, stage:Stage IIA, dead, 358 days 7117.1
TCGA-85-A53L-01A 63 years, male, asian, stage:Stage IIA, alive, 377 days 7097.8
TCGA-56-6545-01A 77 years, female, white, stage:Stage IB, alive, 666 days 7014.4
TCGA-77-8007-01A 68 years, male, stage:Stage IIB, dead, 198 days 6930.1
TCGA-NK-A7XE-01A 66 years, male, black or african american, stage:Stage IIIB, alive, 13 days 6918.3
TCGA-77-8144-01A 70 years, male, stage:Stage IB, alive, 833 days 6908.6
TCGA-60-2713-01A 64 years, male, white, stage:Stage IB, alive, 1731 days 6826.0
TCGA-34-5928-01A 83 years, female, white, stage:Stage IIB, alive, 1196 days 6821.2
TCGA-60-2707-01A 70 years, male, stage:Stage IB, dead, 667 days 6737.7
TCGA-39-5011-01A 70 years, female, white, stage:Stage IA, alive, 4053 days 6733.1
TCGA-56-8503-01A 76 years, female, white, stage:Stage IIB, alive, 41 days 6715.5
TCGA-90-6837-01A 64 years, male, white, stage:Stage IIB, alive, 758 days 6703.7
TCGA-21-1070-01A 60 years, female, black or african american, stage:Stage IIIA, alive, 3636 days 6664.9
TCGA-22-4593-01A 77 years, male, white, stage:Stage IIA, dead, 1067 days 6651.9
TCGA-21-1081-01A 69 years, male, white, stage:Stage IIB, dead, 284 days 6623.8
TCGA-52-7810-01A 60 years, female, white, stage:Stage IIB, alive, 923 days 6550.6
TCGA-60-2724-01A 47 years, male, white, stage:Stage IIIA, alive, 717 days 6483.3
TCGA-68-8251-01A 78 years, male, white, stage:Stage IB, alive, 406 days 6475.4
TCGA-43-2576-01A 62 years, female, white, stage:Stage IIIA, alive, 1223 days 6472.0
TCGA-85-8582-01A 49 years, male, white, stage:Stage IA, alive, 1160 days 6457.9
TCGA-77-7337-01A 65 years, male, white, stage:Stage IIB, dead, 3253 days 6435.1
TCGA-18-3409-01A 74 years, male, white, stage:Stage IA, alive, 3747 days 6432.4
TCGA-21-5784-01A 80 years, female, white, stage:Stage IB, alive, 1268 days 6400.3
TCGA-NC-A5HP-01A 69 years, male, white, stage:Stage IV, dead, 770 days 6329.7
TCGA-22-5481-01A 72 years, female, white, stage:Stage IIB, dead, 2409 days 6298.9
TCGA-77-8008-01A 68 years, male, stage:Stage IB, dead, 2639 days 6284.0
TCGA-37-A5EM-01A 49 years, male, white, stage:Stage II, alive, 867 days 6275.6
TCGA-60-2698-01A 62 years, male, white, stage:Stage IIB, dead, 311 days 6256.1
TCGA-33-4533-01A 76 years, female, black or african american, stage:Stage IB, alive, 4068 days 6233.0
TCGA-85-8048-01A 62 years, male, white, stage:Stage IA, alive, 765 days 6174.0
TCGA-56-A4ZJ-01A 75 years, female, white, stage:Stage IA, alive, 640 days 6165.9
TCGA-85-A5B5-01A 58 years, male, white, stage:Stage IA, alive, 111 days 6156.6
TCGA-66-2769-01A 75 years, male, stage:Stage IIIB, dead, 215 days 6129.8
TCGA-94-8491-01A 73 years, male, white, stage:Stage IIA, alive, 810 days 6109.1
TCGA-63-A5MT-01A 74 years, male, stage:Stage IIB, alive, 498 days 6101.8
TCGA-85-6798-01A 57 years, male, white, stage:Stage IIIA, dead, 195 days 6075.4
TCGA-18-3417-01A 65 years, male, stage:Stage IV, dead, 1097 days 6049.9
TCGA-66-2744-01A 71 years, male, stage:Stage IIB, alive, 30 days 6043.8
TCGA-NC-A5HK-01A 58 years, female, white, stage:Stage IIB, alive, 128 days 6033.7
TCGA-56-A5DR-01A 81 years, male, white, stage:Stage IA, alive, 4 days 6006.8
TCGA-22-5478-01A 79 years, male, stage:Stage IB, dead, 24 days 6003.1
TCGA-NC-A5HH-01A 53 years, male, white, stage:Stage IA, alive, 37 days 5977.0
TCGA-77-A5FZ-01A 64 years, male, stage:Stage IIIB, dead, 3838 days 5966.5
TCGA-85-A4JB-01A 74 years, male, white, stage:Stage IIB, alive, 942 days 5921.9
TCGA-60-2723-01A 74 years, female, white, stage:Stage IB, alive, 1092 days 5895.3
TCGA-77-8131-01A 72 years, male, stage:Stage IB, dead, 383 days 5843.3
TCGA-85-8666-01A 65 years, male, white, stage:Stage IB, dead, 687 days 5822.9
TCGA-22-5473-01A 78 years, male, white, stage:'--, dead, 1933 days 5782.8
TCGA-22-0944-01A 61 years, male, white, stage:Stage IB, dead, 223 days 5766.4
TCGA-94-A4VJ-01A 71 years, female, white, stage:Stage IA, alive, 430 days 5757.3
TCGA-56-8304-01A 73 years, female, white, stage:Stage IA, alive, 106 days 5734.0
TCGA-56-8626-01A 59 years, male, white, stage:Stage IA, dead, 302 days 5720.2
TCGA-66-2780-01A 65 years, male, stage:Stage IB, dead, 366 days 5718.1
TCGA-22-5472-01A 67 years, male, white, stage:Stage IB, dead, 1975 days 5712.7
TCGA-92-7340-01A 45 years, female, white, stage:Stage IIA, alive, 82 days 5702.7
TCGA-22-0940-01A 71 years, male, white, stage:Stage IIA, dead, 669 days 5688.4
TCGA-34-8455-01A 67 years, male, white, stage:Stage IV, dead, 123 days 5662.8
TCGA-98-A538-01A 67 years, male, white, stage:Stage IIB, alive, 826 days 5657.4
TCGA-37-3789-01A 65 years, male, white, stage:Stage IB, alive, 13 days 5623.8
TCGA-22-5483-01A 74 years, male, white, stage:Stage IIA, dead, 573 days 5617.4
TCGA-43-6647-01A 69 years, female, white, stage:Stage IIB, alive, 757 days 5590.6
TCGA-77-8156-01A 60 years, male, stage:Stage IB, alive, 1106 days 5587.1
TCGA-63-7020-01A male, stage:Stage IA, alive, 2133 days 5574.0
TCGA-O2-A52W-01A 63 years, male, black or african american, stage:Stage I, dead, 261 days 5571.9
TCGA-18-3414-01A 73 years, male, asian, stage:Stage IV, dead, 716 days 5569.0
TCGA-77-A5G3-01A 63 years, male, stage:Stage IIB, alive, 4570 days 5563.9
TCGA-58-8386-01A 75 years, male, stage:Stage IV, dead, 1 days 5537.5
TCGA-22-1016-01A 65 years, male, white, stage:Stage IB, dead, 822 days 5536.8
TCGA-O2-A52N-01A 78 years, male, white, stage:Stage I, dead, 1006 days 5506.5
TCGA-56-7731-01A 66 years, female, white, stage:Stage IB, dead, 3 days 5505.5
TCGA-77-8136-01A 74 years, female, stage:Stage IIB, dead, 1189 days 5497.7
TCGA-52-7812-01A 68 years, male, white, stage:'--, dead, 835 days 5490.0
TCGA-33-4586-01A 57 years, male, white, stage:Stage IIIA, dead, 428 days 5424.6
TCGA-63-A5MN-01A 78 years, female, stage:Stage IIB, dead, 345 days 5416.4
TCGA-43-8115-01A 72 years, female, white, stage:Stage IIA, alive, 407 days 5380.3
TCGA-77-6844-01A 74 years, male, white, stage:Stage IIIA, dead, 2284 days 5370.5
TCGA-77-8146-01A 72 years, male, stage:Stage IA, alive, 3189 days 5367.6
TCGA-60-2715-01A 51 years, male, white, stage:Stage IA, dead, 1075 days 5355.4
TCGA-NC-A5HF-01A 74 years, male, white, stage:Stage IIIB, dead, 138 days 5351.9
TCGA-60-2695-01A 74 years, female, white, stage:Stage IB, alive, 642 days 5341.0
TCGA-33-4566-01A 40 years, male, white, stage:Stage IB, dead, 5287 days 5337.9
TCGA-66-2768-01A 57 years, male, stage:Stage IIB, alive, 61 days 5336.6
TCGA-77-8128-01A 60 years, male, stage:Stage IIIA, dead, 1150 days 5323.7
TCGA-98-8021-01A 75 years, female, white, stage:Stage IA, alive, 937 days 5322.9
TCGA-98-7454-01A 73 years, male, white, stage:Stage IB, alive, 652 days 5318.9
TCGA-34-5929-01A 78 years, female, white, stage:Stage IB, dead, 151 days 5298.0
TCGA-66-2777-01A 71 years, male, stage:Stage IB, alive, 61 days 5293.8
TCGA-77-A5GH-01A 81 years, male, stage:Stage IB, alive, 1182 days 5281.6
TCGA-58-8393-01A 68 years, female, white, stage:Stage IB, alive, 1058 days 5275.8
TCGA-85-8288-01A 70 years, male, white, stage:Stage IIA, dead, 402 days 5268.3
TCGA-92-7341-01A 71 years, male, white, stage:Stage IB, alive, 106 days 5246.6
TCGA-58-8388-01A 60 years, male, white, stage:Stage IB, dead, 412 days 5230.6
TCGA-21-1076-01A 54 years, female, white, stage:Stage IB, alive, 1852 days 5211.1
TCGA-NC-A5HG-01A 59 years, male, white, stage:Stage IIIA, alive, 1963 days 5203.8
TCGA-43-2581-01A 47 years, female, white, stage:Stage IIIA, alive, 1176 days 5198.4
TCGA-77-7463-01A 75 years, male, white, stage:Stage IB, dead, 1423 days 5194.4
TCGA-56-5898-01A 69 years, male, white, stage:Stage IA, alive, 555 days 5170.5
TCGA-96-8169-01A 67 years, female, white, stage:Stage IA, alive, 557 days 5161.6
TCGA-34-5241-01A 79 years, male, white, stage:Stage IB, dead, 515 days 5112.8
TCGA-77-7465-01A 58 years, male, white, stage:Stage IIA, alive, 990 days 5106.3
TCGA-56-5897-01A 74 years, male, white, stage:Stage IA, alive, 378 days 5105.3
TCGA-22-4605-01A 78 years, female, stage:Stage IB, dead, 974 days 5097.2
TCGA-21-5782-01A 68 years, female, white, stage:Stage IB, dead, 962 days 5089.6
TCGA-66-2765-01A 64 years, male, stage:Stage IB, alive, 61 days 5079.4
TCGA-66-2782-01A 71 years, male, stage:Stage IIB, dead, 365 days 5069.2
TCGA-85-8351-01A 72 years, male, white, stage:Stage IIA, alive, 510 days 5063.0
TCGA-56-8628-01A 78 years, male, white, stage:Stage IA, alive, 616 days 5053.3
TCGA-85-7950-01A 46 years, male, white, stage:Stage IB, alive, 576 days 5040.2
TCGA-L3-A4E7-01A 71 years, male, white, stage:Stage IB, alive, 392 days 5039.2
TCGA-21-1072-01A 75 years, male, white, stage:Stage IB, alive, 3016 days 5030.2
TCGA-77-8145-01A 73 years, male, stage:Stage IIIB, dead, 212 days 5030.1
TCGA-22-5479-01A 64 years, male, white, stage:Stage IB, dead, 2625 days 5026.2
TCGA-56-7822-01A 75 years, male, black or african american, stage:Stage IIB, dead, 532 days 5023.6
TCGA-33-4547-01A 68 years, male, white, stage:Stage IB, alive, 2419 days 5020.3
TCGA-60-2714-01A 66 years, female, white, stage:Stage IIB, alive, 1531 days 5014.5
TCGA-NC-A5HJ-01A 59 years, male, white, stage:Stage IIB, dead, 418 days 5007.5
TCGA-63-A5MM-01A 69 years, female, stage:Stage IIB, dead, 456 days 5005.8
TCGA-33-4587-01A 63 years, female, white, stage:Stage IB, dead, 1656 days 5000.6
TCGA-77-A5G6-01A 66 years, male, stage:Stage IIIA, dead, 678 days 4986.1
TCGA-39-5037-01A 65 years, male, white, stage:Stage IIA, alive, 1690 days 4977.9
TCGA-56-8625-01A 66 years, female, white, stage:Stage IIIA, dead, 315 days 4975.8
TCGA-58-A46J-01A 64 years, male, white, stage:Stage IIB, alive, 2589 days 4971.1
TCGA-63-A5MR-01A 70 years, female, stage:Stage IB, alive, 2716 days 4962.0
TCGA-33-6737-01A 71 years, male, white, stage:Stage IIIA, dead, 601 days 4960.7
TCGA-33-4538-01A 66 years, male, white, stage:Stage IIIA, dead, 2979 days 4960.3
TCGA-77-8133-01A 74 years, male, stage:Stage IIA, dead, 1640 days 4952.0
TCGA-NK-A5CX-01A 73 years, male, white, stage:Stage IIA, alive, 111 days 4925.6
TCGA-66-2742-01A 70 years, male, stage:Stage IV, alive, 641 days 4921.9
TCGA-NC-A5HI-01A 68 years, female, white, stage:Stage IB, alive, 1743 days 4887.4
TCGA-56-8309-01A 66 years, male, white, stage:Stage IA, alive, 428 days 4859.1
TCGA-66-2790-01A 72 years, male, stage:Stage IIB, alive, 699 days 4848.5
TCGA-21-1071-01A 67 years, male, white, stage:Stage IB, dead, 1426 days 4843.5
TCGA-33-4589-01A 62 years, female, white, stage:Stage IIB, dead, 47 days 4843.4
TCGA-43-8118-01A 55 years, female, white, stage:Stage IA, dead, 89 days 4838.6
TCGA-22-1012-01A 80 years, female, white, stage:Stage IB, dead, 429 days 4815.7
TCGA-33-A4WN-01A 60 years, male, white, stage:Stage IB, dead, 143 days 4813.9
TCGA-52-7811-01A 67 years, male, white, stage:Stage IB, dead, 266 days 4810.5
TCGA-56-1622-01A 58 years, male, white, stage:Stage IB, dead, 881 days 4804.9
TCGA-77-7139-01A 56 years, male, white, stage:Stage IIB, alive, 4261 days 4802.4
TCGA-77-8148-01A 68 years, male, stage:Stage IIIA, alive, 2023 days 4801.9
TCGA-60-2710-01A 67 years, female, white, stage:Stage IIA, alive, 2024 days 4794.4
TCGA-34-5239-01A 75 years, male, white, stage:Stage IIIA, alive, 1834 days 4790.3
TCGA-39-5039-01A 76 years, male, white, stage:Stage IIA, dead, 544 days 4785.9
TCGA-94-8035-01A 64 years, male, white, stage:Stage IIB, alive, 122 days 4774.9
TCGA-56-7222-01A 60 years, male, white, stage:Stage IB, dead, 562 days 4763.9
TCGA-94-7557-01A 73 years, male, black or african american, stage:Stage IB, dead, 5 days 4755.5
TCGA-85-8664-01A 73 years, male, white, stage:Stage IIB, dead, 550 days 4754.7
TCGA-85-A4CN-01A 56 years, female, white, stage:Stage IIB, alive, 1038 days 4754.3
TCGA-98-A53H-01A 76 years, female, white, stage:Stage IA, alive, 618 days 4747.8
TCGA-37-3792-01A 69 years, male, white, stage:Stage IB, alive, 12 days 4742.1
TCGA-85-7710-01A 59 years, female, white, stage:Stage IA, alive, 42 days 4692.7
TCGA-43-6770-01A 59 years, female, black or african american, stage:Stage IB, alive, 653 days 4692.7
TCGA-60-2706-01A 58 years, male, white, stage:Stage IA, alive, 2820 days 4684.6
TCGA-NC-A5HQ-01A 70 years, male, white, stage:Stage IIIA, dead, 448 days 4680.9
TCGA-60-2719-01A 83 years, female, white, stage:Stage IB, alive, 1297 days 4664.4
TCGA-22-1002-01A 69 years, male, white, stage:Stage IA, dead, 131 days 4656.4
TCGA-58-8390-01A 70 years, male, white, stage:Stage IIA, alive, 911 days 4654.8
TCGA-52-7622-01A 62 years, female, white, stage:Stage IA, alive, 862 days 4636.8
TCGA-22-5482-01A 81 years, male, white, stage:Stage IB, dead, 357 days 4634.1
TCGA-34-2596-01A 70 years, male, white, stage:Stage IIB, dead, 80 days 4633.5
TCGA-NC-A5HD-01A 79 years, male, white, stage:Stage IIB, dead, 2 days 4633.5
TCGA-77-8139-01A 72 years, male, stage:Stage IIB, alive, 3166 days 4626.7
TCGA-22-4595-01A 57 years, male, white, stage:Stage IIIA, dead, 734 days 4615.3
TCGA-39-5024-01A 65 years, female, white, stage:Stage IIIA, alive, 2510 days 4614.1
TCGA-39-5027-01A 73 years, male, white, stage:Stage IB, alive, 3108 days 4604.6
TCGA-60-2725-01A 74 years, male, white, stage:Stage IB, alive, 816 days 4595.3
TCGA-37-3783-01A 51 years, male, white, stage:Stage IIIA, alive, 122 days 4592.0
TCGA-98-A539-01A 63 years, male, white, stage:Stage IIB, alive, 173 days 4587.2
TCGA-O2-A52V-01A 75 years, female, black or african american, stage:Stage II, dead, 1335 days 4584.3
TCGA-33-AASI-01A 65 years, female, black or african american, stage:Stage IIB, dead, 1344 days 4578.1
TCGA-56-8504-01A 74 years, male, white, stage:Stage IB, alive, 510 days 4558.5
TCGA-43-A474-01A 66 years, male, white, stage:Stage IIA, alive, 353 days 4545.6
TCGA-60-2696-01A 76 years, female, black or african american, stage:Stage IIA, dead, 109 days 4534.4
TCGA-34-2608-01A 84 years, male, white, stage:Stage IB, dead, 1000 days 4515.7
TCGA-77-7338-01A 64 years, male, white, stage:Stage IB, dead, 5 days 4511.4
TCGA-98-A53J-01A 77 years, male, white, stage:Stage IB, alive, 630 days 4508.4
TCGA-66-2753-01A 69 years, male, stage:Stage IB, alive, 31 days 4495.3
TCGA-94-A5I6-01A 62 years, male, white, stage:Stage IIB, alive, 538 days 4485.3
TCGA-56-8629-01A 63 years, male, white, stage:Stage IIA, alive, 481 days 4484.4
TCGA-77-6842-01A 79 years, male, white, stage:Stage IIB, dead, 899 days 4478.5
TCGA-58-A46L-01A 73 years, male, white, stage:Stage IIIA, alive, 1723 days 4466.6
TCGA-77-6845-01A 69 years, male, white, stage:Stage IIB, dead, 708 days 4465.1
TCGA-18-5595-01A 50 years, male, stage:Stage IB, dead, 827 days 4454.3
TCGA-51-4079-01A 73 years, female, black or african american, stage:Stage IB, dead, 12 days 4444.2
TCGA-56-8623-01A 71 years, male, white, stage:Stage IB, dead, 692 days 4432.4
TCGA-43-5668-01A 78 years, male, white, stage:Stage IIA, dead, 559 days 4423.7
TCGA-96-7545-01A 73 years, male, white, stage:Stage IA, dead, 1736 days 4408.2
TCGA-85-8352-01A 67 years, male, white, stage:Stage IIIA, dead, 161 days 4395.2
TCGA-77-8153-01A 77 years, female, stage:Stage IB, alive, 1992 days 4387.1
TCGA-85-8052-01A 53 years, male, white, stage:Stage IIB, alive, 734 days 4386.7
TCGA-22-5471-01A 75 years, male, white, stage:Stage IB, alive, 1845 days 4385.5
TCGA-85-A511-01A 62 years, male, white, stage:Stage IIB, dead, 455 days 4375.9
TCGA-56-A4BW-01A 55 years, male, white, stage:Stage IIA, alive, 585 days 4364.6
TCGA-90-7767-01A 56 years, male, white, stage:Stage IIB, alive, 89 days 4357.5
TCGA-66-2737-01A 72 years, male, stage:Stage IIB, alive, 61 days 4349.8
TCGA-68-7756-01A 84 years, male, white, stage:Stage IIIA, alive, 202 days 4334.4
TCGA-60-2709-01A 69 years, male, black or african american, stage:Stage IB, alive, 1505 days 4319.1
TCGA-68-8250-01A 66 years, male, black or african american, stage:Stage IA, alive, 244 days 4315.7
TCGA-LA-A446-01A 68 years, male, white, stage:Stage IA, alive, 401 days 4303.2
TCGA-85-7844-01A 71 years, male, white, stage:Stage IB, alive, 911 days 4302.7
TCGA-34-2600-01A 76 years, female, white, stage:Stage IA, dead, 1874 days 4302.5
TCGA-34-5927-01A 70 years, female, white, stage:Stage IA, alive, 1361 days 4294.0
TCGA-58-8392-01A 70 years, male, white, stage:Stage IB, dead, 501 days 4287.9
TCGA-66-2785-01A 65 years, male, stage:Stage IB, alive, 60 days 4285.8
TCGA-90-A4EE-01A 53 years, male, white, stage:Stage IIA, alive, 688 days 4280.0
TCGA-21-5787-01A 65 years, male, black or african american, stage:Stage IIIA, dead, 329 days 4259.4
TCGA-94-7943-01A 80 years, male, white, stage:Stage IA, alive, 559 days 4257.9
TCGA-46-3767-01A 76 years, male, white, stage:Stage IA, alive, 396 days 4236.1
TCGA-NC-A5HE-01A 60 years, male, white, stage:Stage IIB, alive, 2336 days 4228.9
TCGA-22-1000-01A 76 years, male, white, stage:Stage IB, dead, 454 days 4206.1
TCGA-33-AASD-01A 83 years, male, black or african american, stage:Stage IA, dead, 2249 days 4206.1
TCGA-MF-A522-01A 54 years, male, white, stage:Stage IB, dead, 360 days 4199.8
TCGA-85-7698-01A 48 years, male, white, stage:Stage IA, alive, 952 days 4171.8
TCGA-22-4609-01A 81 years, male, white, stage:Stage IA, dead, 291 days 4168.5
TCGA-56-A62T-01A 78 years, male, black or african american, stage:Stage IIA, alive, 440 days 4164.4
TCGA-85-8350-01A 61 years, male, white, stage:Stage IA, alive, 683 days 4156.6
TCGA-85-A4JC-01A 84 years, male, white, stage:Stage IIA, dead, 604 days 4156.1
TCGA-77-A5GA-01A 76 years, male, stage:Stage IB, alive, 1280 days 4155.5
TCGA-66-2773-01A 69 years, male, stage:Stage IB, dead, 92 days 4149.3
TCGA-21-1082-01A 61 years, male, white, stage:Stage IB, alive, 3644 days 4149.2
TCGA-85-6561-01A 66 years, male, white, stage:Stage IB, alive, 1224 days 4148.5
TCGA-37-A5EN-01A 59 years, male, white, stage:Stage IIIB, alive, 660 days 4147.4
TCGA-46-3766-01A 62 years, female, white, stage:Stage IA, alive, 370 days 4145.7
TCGA-60-2721-01A 73 years, male, white, stage:Stage IB, alive, 983 days 4144.2
TCGA-56-8305-01A 72 years, male, white, stage:Stage IB, alive, 105 days 4137.3
TCGA-21-1075-01A 57 years, male, white, stage:Stage IIB, alive, 2134 days 4135.4
TCGA-34-8454-01A 62 years, female, white, stage:Stage IIIA, alive, 1180 days 4122.2
TCGA-60-2703-01A 73 years, male, white, stage:Stage IIB, dead, 2945 days 4111.5
TCGA-56-7580-01A 84 years, male, white, stage:Stage IB, alive, 925 days 4088.0
TCGA-39-5019-01A 70 years, male, white, stage:Stage IB, alive, 3387 days 4079.8
TCGA-33-4582-01A 55 years, male, white, stage:Stage IA, dead, 3149 days 4063.8
TCGA-60-2697-01A 41 years, male, white, stage:Stage IIA, dead, 372 days 4062.7
TCGA-90-A59Q-01A 61 years, female, white, stage:Stage IIA, dead, 322 days 4042.6
TCGA-90-7964-01A 70 years, male, white, stage:Stage IB, alive, 428 days 4040.5
TCGA-96-A4JL-01A 78 years, female, asian, stage:Stage IIA, alive, 842 days 4026.5
TCGA-77-8140-01A 66 years, female, stage:Stage IIB, dead, 351 days 4026.4
TCGA-68-A59J-01A 74 years, female, white, stage:Stage IB, alive, 448 days 4024.0
TCGA-43-A56V-01A 61 years, male, black or african american, stage:Stage IIIA, alive, 366 days 4021.5
TCGA-63-7023-01A male, stage:Stage IIA, alive, 1682 days 4017.2
TCGA-43-7658-01A 75 years, female, white, stage:Stage IA, dead, 2378 days 4017.1
TCGA-77-8143-01A 76 years, male, stage:Stage IIIA, dead, 803 days 4015.4
TCGA-85-8355-01A 63 years, male, white, stage:Stage IA, alive, 61 days 4009.3
TCGA-43-7656-01A 71 years, male, white, stage:Stage IA, alive, 596 days 4008.6
TCGA-56-A49D-01A 67 years, male, white, stage:Stage IIIA, alive, 637 days 4000.1
TCGA-NC-A5HN-01A 77 years, male, white, stage:Stage IIA, alive, 1499 days 3996.4
TCGA-66-2788-01A 56 years, male, stage:Stage IB, alive, 699 days 3993.1
TCGA-85-8353-01A 72 years, male, white, stage:Stage IIIA, dead, 94 days 3989.2
TCGA-98-A53D-01A 68 years, male, white, stage:Stage IIB, dead, 645 days 3987.5
TCGA-22-5485-01A 58 years, female, white, stage:Stage IA, dead, 916 days 3986.6
TCGA-43-6143-01A 70 years, male, white, stage:Stage IB, alive, 699 days 3981.3
TCGA-66-2800-01A 70 years, male, stage:Stage IIIB, alive, 1492 days 3976.0
TCGA-85-7843-01A 50 years, male, white, stage:Stage IIA, alive, 35 days 3957.2
TCGA-34-7107-01A 70 years, male, white, stage:Stage II, dead, 34 days 3952.7
TCGA-43-2578-01A 59 years, female, white, stage:Stage IA, dead, 684 days 3933.7
TCGA-51-4081-01A 55 years, male, white, stage:Stage IIB, alive, 911 days 3923.3
TCGA-22-5489-01A 64 years, male, white, stage:Stage IA, dead, 1912 days 3916.5
TCGA-63-A5ML-01A 68 years, male, stage:Stage IB, alive, 1386 days 3904.0
TCGA-66-2759-01A 66 years, male, stage:Stage IIIA, alive, 762 days 3892.8
TCGA-34-5232-01A 75 years, female, black or african american, stage:Stage IIA, alive, 2471 days 3854.2
TCGA-94-8490-01A 70 years, male, white, stage:Stage IIB, alive, 153 days 3847.4
TCGA-98-8023-01A 70 years, male, white, stage:Stage IIIA, alive, 649 days 3835.9
TCGA-22-5491-01A 74 years, male, white, stage:Stage IA, dead, 1713 days 3831.4
TCGA-58-A46M-01A 61 years, male, white, stage:Stage IIB, alive, 1072 days 3827.4
TCGA-56-7579-01A 61 years, male, white, stage:Stage IIIA, dead, 951 days 3816.3
TCGA-34-8456-01A 71 years, female, white, stage:Stage IIA, alive, 804 days 3811.4
TCGA-77-8009-01A 68 years, male, stage:Stage IIB, dead, 1695 days 3797.1
TCGA-22-4607-01A 75 years, male, white, stage:Stage IB, dead, 587 days 3795.2
TCGA-85-8584-01A 71 years, male, white, stage:Stage IIA, dead, 383 days 3783.9
TCGA-33-AAS8-01A 59 years, female, black or african american, stage:Stage IA, dead, 1114 days 3773.4
TCGA-77-7140-01A 69 years, female, white, stage:Stage IIB, dead, 632 days 3763.1
TCGA-85-8580-01A 52 years, female, white, stage:Stage IB, alive, 1113 days 3756.8
TCGA-90-7769-01A 55 years, male, white, stage:Stage IIB, alive, 358 days 3742.1
TCGA-18-3407-01A 72 years, male, asian, stage:Stage IB, dead, 136 days 3735.3
TCGA-XC-AA0X-01A 77 years, female, black or african american, stage:Stage IA, dead, 6 days 3727.6
TCGA-56-A4BY-01A 66 years, male, white, stage:Stage IB, dead, 543 days 3718.9
TCGA-56-7221-01A 79 years, male, white, stage:Stage IB, alive, 608 days 3700.4
TCGA-66-2789-01A 73 years, male, stage:Stage IIIB, dead, 123 days 3698.6
TCGA-68-7755-01A 60 years, female, white, stage:Stage IIA, alive, 83 days 3688.8
TCGA-85-6560-01A 59 years, male, white, stage:Stage IIA, alive, 1259 days 3682.6
TCGA-22-1011-01A 73 years, male, white, stage:Stage IB, dead, 53 days 3680.1
TCGA-85-8049-01A 57 years, male, white, stage:Stage IB, alive, 579 days 3674.7
TCGA-39-5034-01A 73 years, female, white, stage:Stage IIB, dead, 1107 days 3667.6
TCGA-51-6867-01A 72 years, female, white, stage:Stage I, dead, 1856 days 3666.0
TCGA-18-3408-01A 77 years, female, white, stage:Stage IB, dead, 2304 days 3657.4
TCGA-56-7730-01A 73 years, male, white, stage:Stage IIA, dead, 198 days 3655.7
TCGA-66-2767-01A 62 years, male, stage:Stage IIIB, alive, 61 days 3637.8
TCGA-85-A4QR-01A 67 years, male, white, stage:Stage IB, alive, 600 days 3636.8
TCGA-18-3411-01A 63 years, female, stage:Stage IIIA, alive, 3576 days 3634.5
TCGA-66-2794-01A 64 years, male, stage:Stage IIIB, alive, 1645 days 3633.0
TCGA-98-8022-01A 61 years, male, white, stage:Stage IA, dead, 933 days 3627.5
TCGA-NK-A5D1-01A 57 years, male, white, stage:Stage IIA, alive, 511 days 3617.9
TCGA-85-A4CL-01A 65 years, male, white, stage:Stage IA, dead, 921 days 3614.8
TCGA-46-3768-01A 58 years, male, white, stage:Stage IIIA, dead, 299 days 3609.3
TCGA-22-4604-01A 73 years, male, white, stage:Stage IIA, dead, 399 days 3606.7
TCGA-33-4583-01A 73 years, male, white, stage:Stage IA, dead, 4601 days 3604.4
TCGA-18-3410-01A 81 years, male, stage:Stage IIB, dead, 146 days 3601.6
TCGA-18-3412-01A 52 years, male, white, stage:Stage IB, dead, 345 days 3592.1
TCGA-33-6738-01A 80 years, male, white, stage:Stage IIIA, alive, 1927 days 3587.6
TCGA-39-5040-01A 59 years, male, white, stage:Stage IIIA, dead, 519 days 3577.6
TCGA-60-2704-01A 73 years, male, white, stage:Stage IIB, dead, 1154 days 3559.1
TCGA-56-7223-01A 66 years, male, white, stage:Stage IIIA, dead, 442 days 3551.7
TCGA-60-2722-01A 66 years, male, white, stage:Stage IIB, alive, 908 days 3548.0
TCGA-60-2711-01A 64 years, female, white, stage:Stage IB, alive, 1260 days 3537.8
TCGA-85-8071-01A 52 years, male, white, stage:Stage IIA, alive, 815 days 3536.0
TCGA-39-5031-01A 76 years, female, stage:Stage IA, dead, 1841 days 3535.4
TCGA-85-7697-01A 49 years, male, white, stage:Stage IIB, alive, 1063 days 3534.2
TCGA-18-3415-01A 77 years, male, stage:Stage IB, dead, 2803 days 3525.8
TCGA-18-4086-01A 64 years, male, stage:Stage IB, dead, 85 days 3520.0
TCGA-56-7582-01A 83 years, male, white, stage:Stage IB, alive, 601 days 3510.4
TCGA-22-5474-01A 74 years, male, white, stage:Stage IB, dead, 445 days 3508.8
TCGA-22-5477-01A 65 years, male, white, stage:Stage IA, dead, 1346 days 3500.7
TCGA-56-A4ZK-01A 76 years, female, white, stage:Stage IB, alive, 570 days 3500.4
TCGA-66-2792-01A 58 years, male, stage:Stage IIB, alive, 913 days 3497.0
TCGA-66-2763-01A 63 years, female, stage:Stage IB, alive, 30 days 3489.0
TCGA-92-8064-01A 58 years, male, white, stage:'--, alive, 160 days 3488.9
TCGA-85-7699-01A 73 years, male, white, stage:Stage IIIA, dead, 1001 days 3482.9
TCGA-77-8154-01A 67 years, male, stage:Stage IA, alive, 1841 days 3482.1
TCGA-58-8391-01A 57 years, female, white, stage:Stage IIIA, alive, 2167 days 3479.7
TCGA-85-A510-01A 74 years, female, white, stage:Stage IIB, alive, 482 days 3465.4
TCGA-66-2783-01A 67 years, male, stage:Stage IIIB, alive, 759 days 3451.7
TCGA-43-7657-01A 68 years, female, white, stage:Stage IA, alive, 236 days 3443.0
TCGA-L3-A524-01A 45 years, female, white, stage:Stage IIB, dead, 490 days 3437.1
TCGA-96-7544-01A 83 years, male, white, stage:Stage IIB, dead, 2160 days 3415.7
TCGA-63-A5MG-01A 68 years, male, stage:Stage IB, alive, 2148 days 3411.5
TCGA-96-8170-01A 75 years, female, white, stage:Stage IIA, alive, 531 days 3401.8
TCGA-58-A46N-01A 52 years, male, white, stage:Stage IB, alive, 910 days 3395.4
TCGA-18-3416-01A 83 years, male, stage:Stage IIB, dead, 973 days 3391.3
TCGA-98-A53B-01A 69 years, male, white, stage:Stage IB, dead, 61 days 3391.0
TCGA-63-A5MW-01A 76 years, male, stage:Stage IB, alive, 1639 days 3386.0
TCGA-96-A4JK-01A 65 years, male, white, stage:Stage IIA, alive, 589 days 3384.1
TCGA-33-AASB-01A 66 years, male, black or african american, stage:Stage IB, dead, 211 days 3381.3
TCGA-56-A4BX-01A 70 years, male, white, stage:Stage IIA, alive, 405 days 3375.4
TCGA-66-2793-01A 68 years, male, stage:Stage IIIB, dead, 306 days 3371.0
TCGA-56-8308-01A 79 years, male, white, stage:Stage IIB, alive, 517 days 3347.5
TCGA-22-4591-01A 80 years, male, white, stage:Stage IIIA, dead, 623 days 3345.8
TCGA-56-8083-01A 56 years, male, white, stage:Stage IB, alive, 150 days 3328.4
TCGA-22-5480-01A 66 years, female, white, stage:Stage IA, dead, 2170 days 3301.3
TCGA-66-2786-01A 68 years, female, stage:Stage IA, alive, 790 days 3300.4
TCGA-46-3765-01A 59 years, female, white, stage:Stage IA, alive, 405 days 3290.6
TCGA-22-A5C4-01A 70 years, male, white, stage:Stage IIA, alive, 671 days 3289.7
TCGA-85-8277-01A 70 years, male, white, stage:Stage IIIA, dead, 307 days 3284.7
TCGA-34-5231-01A 72 years, male, white, stage:Stage IA, dead, 1984 days 3278.2
TCGA-52-7809-01A 74 years, male, white, stage:Stage IB, dead, 166 days 3273.7
TCGA-22-4599-01A 73 years, female, white, stage:Stage IB, dead, 1161 days 3272.8
TCGA-90-7766-01A 66 years, female, white, stage:Stage IA, alive, 289 days 3270.9
TCGA-43-A475-01A 67 years, female, white, stage:Stage IIB, alive, 296 days 3269.6
TCGA-43-8116-01A 73 years, male, white, stage:Stage IA, alive, 358 days 3265.5
TCGA-39-5021-01A 70 years, male, white, stage:Stage IB, dead, 2086 days 3264.9
TCGA-NC-A5HR-01A 75 years, female, white, stage:Stage IIA, alive, 1244 days 3253.6
TCGA-56-8307-01A 55 years, female, white, stage:Stage IIB, alive, 818 days 3253.0
TCGA-85-8072-01A 60 years, male, white, stage:Stage IA, alive, 932 days 3252.7
TCGA-98-A53C-01A 77 years, female, white, stage:Stage IA, alive, 822 days 3247.1
TCGA-39-5029-01A 67 years, male, white, stage:Stage IIIA, dead, 740 days 3240.7
TCGA-37-5819-01A 64 years, male, white, stage:Stage IIIA, alive, 103 days 3234.1
TCGA-39-5028-01A 75 years, male, white, stage:Stage IIIA, dead, 52 days 3231.1
TCGA-O2-A5IB-01A 71 years, female, white, stage:Stage III, dead, 340 days 3213.1
TCGA-18-4721-01A 74 years, male, white, stage:Stage IA, alive, 4694 days 3184.4
TCGA-21-1077-01A 64 years, male, white, stage:Stage IIB, dead, 1058 days 3165.9
TCGA-66-2791-01A 66 years, male, stage:Stage IIIB, dead, 153 days 3162.3
TCGA-56-8622-01A 68 years, male, white, stage:Stage IB, alive, 55 days 3159.4
TCGA-NK-A5CR-01A 77 years, male, stage:Stage IB, alive, 2542 days 3145.6
TCGA-56-A5DS-01A 72 years, female, white, stage:Stage IB, alive, 8 days 3143.1
TCGA-63-A5MS-01A 78 years, male, stage:Stage IB, alive, 2381 days 3139.6
TCGA-NC-A5HO-01A 70 years, female, white, stage:Stage IIIA, alive, 1336 days 3131.7
TCGA-85-8276-01A 62 years, male, white, stage:Stage IIA, alive, 1050 days 3119.2
TCGA-98-A53I-01A 64 years, male, white, stage:Stage IIA, alive, 565 days 3113.2
TCGA-77-A5GF-01A 70 years, male, stage:Stage IIA, dead, 840 days 3104.7
TCGA-39-5016-01A 44 years, male, white, stage:Stage IIA, alive, 3850 days 3103.0
TCGA-63-A5MJ-01A 54 years, male, stage:Stage IIB, alive, 1824 days 3094.9
TCGA-77-6843-01A 74 years, male, white, stage:Stage IIA, dead, 2224 days 3093.5
TCGA-46-6025-01A 71 years, male, white, stage:Stage IIB, alive, 324 days 3079.3
TCGA-63-A5MV-01A 69 years, male, stage:Stage IIA, alive, 1100 days 3072.1
TCGA-85-A513-01A 60 years, female, asian, stage:Stage IA, alive, 910 days 3071.3
TCGA-77-8150-01A 64 years, male, stage:Stage IIIA, dead, 1655 days 3069.9
TCGA-66-2787-01A 57 years, male, stage:Stage IA, alive, 1217 days 3043.7
TCGA-22-5492-01A 73 years, female, stage:Stage IIIA, dead, 506 days 3042.9
TCGA-85-A50Z-01A 57 years, male, white, stage:Stage IIA, alive, 493 days 3036.1
TCGA-43-3394-01A 52 years, male, black or african american, stage:Stage IB, dead, 1190 days 3005.4
TCGA-58-A46K-01A 59 years, male, white, stage:Stage IIIA, dead, 1045 days 2973.7
TCGA-77-7142-01A 59 years, female, white, stage:Stage IB, alive, 2227 days 2970.6
TCGA-39-5036-01A 73 years, male, white, stage:Stage IB, alive, 2165 days 2962.2
TCGA-85-8354-01A 53 years, male, white, stage:Stage IB, alive, 995 days 2950.0
TCGA-85-7696-01A 64 years, male, white, stage:Stage IA, alive, 1111 days 2942.3
TCGA-43-6773-01A 76 years, male, white, stage:Stage IIB, dead, 116 days 2901.4
TCGA-63-A5MB-01A 62 years, male, stage:Stage IB, alive, 3123 days 2896.6
TCGA-85-8287-01A 72 years, male, white, stage:Stage IA, dead, 23 days 2886.8
TCGA-68-A59I-01A 73 years, female, black or african american, stage:Stage IIIA, alive, 492 days 2886.1
TCGA-63-7022-01A female, stage:Stage IA, alive, 2073 days 2883.8
TCGA-66-2756-01A 68 years, male, stage:Stage IIIB, alive, 30 days 2882.3
TCGA-18-4083-01A 63 years, male, white, stage:Stage IIB, dead, 188 days 2825.0
TCGA-21-1083-01A 75 years, male, white, stage:Stage IA, dead, 1315 days 2816.5
TCGA-66-2770-01A 79 years, male, stage:Stage IB, alive, 700 days 2813.3
TCGA-21-5786-01A 64 years, male, white, stage:Stage IB, alive, 1032 days 2805.1
TCGA-39-5035-01A 72 years, female, white, stage:Stage IA, alive, 2080 days 2794.8
TCGA-66-2727-01A 55 years, female, stage:Stage IB, dead, 516 days 2784.1
TCGA-33-AASJ-01A 60 years, male, black or african american, stage:Stage IB, dead, 3600 days 2776.7
TCGA-33-AASL-01A 57 years, female, black or african american, stage:Stage IA, dead, 826 days 2762.4
TCGA-21-1078-01A 77 years, male, white, stage:Stage IB, dead, 474 days 2762.2
TCGA-18-3421-01A 65 years, male, white, stage:Stage IB, alive, 2645 days 2758.2
TCGA-39-5022-01A 76 years, male, white, stage:Stage IB, dead, 1679 days 2750.4
TCGA-33-4532-01A 68 years, male, white, stage:Stage IB, dead, 3924 days 2733.1
TCGA-33-A5GW-01A 67 years, male, white, stage:Stage IIA, dead, 9 days 2727.1
TCGA-60-2712-01A 79 years, female, white, stage:Stage IIB, dead, 274 days 2703.7
TCGA-85-A512-01A 46 years, male, white, stage:Stage IIA, alive, 465 days 2685.4
TCGA-39-5030-01A 81 years, female, asian, stage:Stage IIIA, dead, 59 days 2680.6
TCGA-NC-A5HL-01A 73 years, male, white, stage:Stage IIA, dead, 88 days 2668.7
TCGA-66-2781-01A 67 years, male, stage:Stage IB, alive, 121 days 2664.2
TCGA-63-7021-01A male, stage:Stage IA, alive, 2142 days 2662.0
TCGA-22-4601-01A 73 years, female, white, stage:Stage IIIA, dead, 1057 days 2644.3
TCGA-37-4130-01A 56 years, male, white, stage:Stage IA, alive, 247 days 2633.5
TCGA-18-5592-01A 57 years, male, stage:Stage IIB, alive, 1519 days 2633.1
TCGA-66-2778-01A 68 years, female, stage:Stage IIIB, alive, 578 days 2631.8
TCGA-34-5240-01A 73 years, female, white, stage:Stage IIB, alive, 1541 days 2628.4
TCGA-77-7141-01A 64 years, male, white, stage:Stage IB, alive, 15 days 2622.3
TCGA-37-4141-01A 65 years, female, white, stage:Stage IA, alive, 12 days 2564.0
TCGA-O2-A52S-01A 57 years, female, white, stage:Stage III, dead, 387 days 2562.5
TCGA-66-2754-01A 67 years, male, stage:Stage IIIA, alive, 61 days 2536.1
TCGA-63-A5MP-01A 56 years, male, stage:Stage IIB, alive, 769 days 2524.2
TCGA-56-8082-01A 80 years, female, white, stage:Stage IIA, alive, 455 days 2495.4
TCGA-22-4613-01A 73 years, female, white, stage:Stage IA, dead, 358 days 2455.0
TCGA-63-A5MI-01A 65 years, male, stage:Stage IIIA, alive, 1784 days 2439.4
TCGA-22-1005-01A 63 years, male, white, stage:Stage IA, dead, 1953 days 2381.3
TCGA-63-A5MY-01A 63 years, male, stage:Stage IA, alive, 1052 days 2377.1
TCGA-70-6723-01A 65 years, male, asian, stage:Stage IIA, alive, 375 days 2373.9
TCGA-21-1080-01A 66 years, male, white, stage:Stage IB, alive, 3724 days 2369.0
TCGA-66-2795-01A 68 years, male, stage:Stage IIIB, alive, 122 days 2314.7
TCGA-66-2771-01A 60 years, male, stage:Stage IIB, alive, 578 days 2302.7
TCGA-60-2716-01A 39 years, male, stage:Stage IIB, alive, 1475 days 2290.2
TCGA-37-4135-01A 68 years, male, white, stage:Stage IB, alive, 207 days 2232.7
TCGA-92-8065-01A 74 years, female, white, stage:Stage IIB, alive, 70 days 2226.7
TCGA-43-3920-01A 71 years, male, white, stage:Stage IB, alive, 1007 days 2217.7
TCGA-34-5234-01A 71 years, female, white, stage:Stage IA, alive, 2271 days 2203.4
TCGA-J1-A4AH-01A 70 years, male, white, stage:Stage IIA, alive, 581 days 2158.5
TCGA-66-2758-01A 71 years, male, stage:Stage IB, alive, 639 days 2095.5
TCGA-37-4129-01A 52 years, female, white, stage:Stage IA, alive, 242 days 2087.1
TCGA-58-8387-01A 60 years, male, white, stage:Stage IIA, dead, 403 days 2086.2
TCGA-66-2766-01A 54 years, male, stage:Stage IIIA, alive, 31 days 2084.7
TCGA-66-2757-01A 65 years, female, stage:Stage IA, dead, 1338 days 2077.5
TCGA-43-A56U-01A 76 years, female, white, stage:Stage IA, alive, 432 days 2074.7
TCGA-94-A5I4-01A 61 years, male, white, stage:Stage IIA, alive, 491 days 2043.3
TCGA-37-4133-01A 63 years, male, white, stage:Stage IIIA, alive, 238 days 1989.2
TCGA-98-A53A-01A 70 years, male, black or african american, stage:Stage IB, dead, 552 days 1986.4
TCGA-51-4080-01A 65 years, male, black or african american, stage:Stage IIIB, dead, 12 days 1900.7
TCGA-46-6026-01A 81 years, male, white, stage:Stage IIB, alive, 423 days 1883.1
TCGA-37-4132-01A 61 years, female, white, stage:Stage IV, alive, 227 days 1878.1
TCGA-22-4594-01A 60 years, female, stage:Stage IIIA, dead, 1470 days 1834.7
TCGA-85-8070-01A 71 years, male, white, stage:Stage IB, alive, 960 days 1797.4
TCGA-90-A4ED-01A 69 years, male, white, stage:Stage IB, alive, 615 days 1760.4
TCGA-18-3419-01A 73 years, male, stage:Stage IIB, alive, 2811 days 1742.7
TCGA-18-3406-01A 67 years, male, white, stage:Stage IA, dead, 371 days 1714.7
TCGA-NC-A5HT-01A 69 years, male, white, stage:Stage IIIA, alive, 804 days 1456.1
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LUNG SQUAMOUS CELL CARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

ACTB is not prognostic in Lung Squamous Cell Carcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 3753.81
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 3220.1
Number of samples 68
Samples
Sample Description pTPM
L736 67 years, male, stage:Stage IA, dead, 1195 days 6104.3
L817 76 years, female, stage:Stage IIIA, dead, 1279 days 5342.1
L723 67 years, male, stage:Stage IIA, dead, 433 days 5279.1
L452 62 years, male, stage:Stage IIIA, dead, 3115 days 4789.4
L824 70 years, male, stage:Stage IA, dead, 665 days 4786.5
L559 72 years, male, stage:Stage IIB, alive, 2615 days 4636.8
L568 77 years, female, stage:Stage IIB, dead, 71 days 4571.9
L642 67 years, male, stage:Stage IB, dead, 1167 days 4559.6
L592 61 years, male, stage:Stage IB, alive, 2368 days 4342.9
L633 77 years, female, stage:Stage IA, alive, 2102 days 4192.5
L857 69 years, male, stage:Stage IB, dead, 226 days 4170.8
L856 69 years, male, stage:Stage IA, dead, 1465 days 4128.9
L472 71 years, male, stage:Stage IB, dead, 423 days 4051.5
L608 73 years, male, stage:Stage IA, alive, 2350 days 4007.9
L586 67 years, male, stage:Stage IIA, dead, 784 days 3913.3
L715 69 years, female, stage:Stage IIIA, dead, 150 days 3774.2
L459 75 years, male, stage:Stage IIA, alive, 3181 days 3733.5
L719 63 years, male, stage:Stage IB, alive, 1615 days 3731.7
L655 62 years, male, stage:Stage IIA, dead, 1603 days 3680.2
L767 67 years, male, stage:Stage IA, alive, 1718 days 3621.8
L650 69 years, female, stage:Stage IB, dead, 986 days 3607.5
L685 71 years, female, stage:Stage IIB, alive, 1944 days 3381.9
L447 67 years, male, stage:Stage IIB, alive, 3203 days 3333.6
L539 78 years, male, stage:Stage IB, dead, 370 days 3293.7
L661 66 years, male, stage:Stage IA, dead, 1123 days 3293.1
L886 71 years, male, stage:Stage IB, dead, 1932 days 3208.3
L751 59 years, female, stage:Stage IIIA, alive, 1600 days 3201.8
L488 61 years, female, stage:Stage IIA, alive, 2993 days 3168.5
L755 82 years, male, stage:Stage IIA, dead, 227 days 3165.0
L756 72 years, male, stage:Stage IB, alive, 1796 days 3134.0
L744 75 years, male, stage:Stage IA, alive, 1614 days 3125.2
L852 64 years, male, stage:Stage IB, dead, 700 days 3093.9
L858 69 years, female, stage:Stage IIB, dead, 558 days 3089.1
L820 73 years, female, stage:Stage IA, alive, 2405 days 3072.7
L712 61 years, male, stage:Stage IA, alive, 1698 days 3061.4
L490 58 years, male, stage:Stage IA, dead, 716 days 3049.2
L652 82 years, male, stage:Stage IA, dead, 5 days 3045.8
L563 61 years, female, stage:Stage IIB, dead, 1216 days 3000.7
L483 65 years, male, stage:Stage IB, dead, 77 days 2993.1
L881 70 years, male, stage:Stage IB, alive, 1752 days 2950.5
L747 74 years, female, stage:Stage IA, dead, 1112 days 2949.9
L406 64 years, male, stage:Stage IA, alive, 3057 days 2883.2
L496 77 years, male, stage:Stage IB, alive, 2761 days 2840.7
L470 78 years, female, stage:Stage IB, dead, 1774 days 2836.7
L788 54 years, female, stage:Stage IA, alive, 3385 days 2820.7
L420 57 years, female, stage:Stage IIB, dead, 295 days 2795.0
L854 62 years, female, stage:Stage IB, alive, 2256 days 2779.6
L442 75 years, female, stage:Stage IB, dead, 2433 days 2747.0
L529 79 years, female, stage:Stage IA, alive, 2775 days 2717.6
L739 49 years, female, stage:Stage IIIA, dead, 352 days 2692.3
L760 80 years, male, stage:Stage IIA, alive, 1895 days 2681.3
L456 48 years, male, stage:Stage IIA, dead, 1660 days 2621.1
L604 67 years, male, stage:Stage IIA, dead, 286 days 2613.1
L818 67 years, male, stage:Stage IB, alive, 2480 days 2592.3
L753 61 years, male, stage:Stage IIA, alive, 1705 days 2556.5
L658 65 years, female, stage:Stage IIB, alive, 2083 days 2554.7
L644 67 years, male, stage:Stage IA, dead, 282 days 2497.0
L464 66 years, male, stage:Stage IB, dead, 1935 days 2411.8
L468 53 years, male, stage:Stage IB, alive, 3004 days 2354.7
L758 84 years, male, stage:Stage IA, dead, 1562 days 2252.9
L466 65 years, female, stage:Stage IIIA, dead, 412 days 2214.2
L534 66 years, male, stage:Stage IIA, alive, 2693 days 2213.0
L884 71 years, male, stage:Stage IIA, alive, 1627 days 2191.6
L444 74 years, female, stage:Stage IIB, alive, 3337 days 2047.2
L860 77 years, male, stage:Stage IA, alive, 2056 days 1798.1
L864 66 years, female, stage:Stage IA, alive, 2192 days 1693.1
L572 58 years, male, stage:Stage IA, alive, 2532 days 1552.6
L457 46 years, female, stage:Stage IIA, alive, 2901 days 1374.0
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LUNG ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples 213
Samples
Sample ID Sample type nRPX
CPT0011710004 Tumor 0.6
CPT0070080003 Normal 0.5
CPT0090900004 Normal 0.5
CPT0105370004 Normal 0.5
CPT0067470004 Normal 0.4
CPT0067290003 Normal 0.4
CPT0125830003 Normal 0.4
CPT0013910003 Normal 0.4
CPT0118620003 Tumor 0.4
CPT0052940004 Tumor 0.4
CPT0105550003 Normal 0.4
CPT0090720003 Normal 0.3
CPT0079850003 Normal 0.3
CPT0105060003 Tumor 0.3
CPT0067770003 Normal 0.3
CPT0113210003 Tumor 0.3
CPT0105610003 Normal 0.3
CPT0066930003 Normal 0.3
CPT0082890003 Normal 0.3
CPT0106110003 Tumor 0.3
CPT0104760003 Normal 0.3
CPT0105250003 Normal 0.3
CPT0105010004 Normal 0.3
CPT0091260003 Normal 0.3
CPT0083140003 Normal 0.3
CPT0001970003 Normal 0.3
CPT0013630003 Normal 0.3
CPT0091860003 Tumor 0.3
CPT0091870003 Normal 0.3
CPT0105270003 Tumor 0.3
CPT0105680003 Normal 0.3
CPT0011750003 Normal 0.3
CPT0011930003 Normal 0.3
CPT0125810003 Tumor 0.3
CPT0111590003 Normal 0.3
CPT0083780003 Tumor 0.3
CPT0069550003 Normal 0.3
CPT0105190003 Normal 0.2
CPT0148100003 Normal 0.2
CPT0068830003 Normal 0.2
CPT0109760003 Normal 0.2
CPT0147400003 Normal 0.2
CPT0090700003 Tumor 0.2
CPT0105980003 Normal 0.2
CPT0090200003 Normal 0.2
CPT0118240003 Normal 0.2
CPT0097600003 Normal 0.2
CPT0118360003 Normal 0.2
CPT0001690003 Normal 0.2
CPT0084170003 Normal 0.2
CPT0113220003 Normal 0.2
CPT0109850003 Normal 0.2
CPT0063840003 Normal 0.2
CPT0067110003 Normal 0.2
CPT0118830003 Normal 0.2
CPT0014290003 Normal 0.2
CPT0014860003 Tumor 0.2
CPT0102480003 Normal 0.2
CPT0148000003 Normal 0.2
CPT0086320003 Normal 0.2
CPT0015420003 Normal 0.2
CPT0063750003 Normal 0.2
CPT0118890003 Normal 0.2
CPT0147900003 Normal 0.2
CPT0023320003 Normal 0.2
CPT0082770003 Normal 0.2
CPT0105740003 Normal 0.2
CPT0083810003 Normal 0.2
CPT0112080003 Normal 0.2
CPT0066810003 Normal 0.2
CPT0148200003 Normal 0.2
CPT0068650003 Normal 0.2
CPT0147500003 Normal 0.2
CPT0106100003 Normal 0.2
CPT0051690004 Tumor 0.2
CPT0109700003 Normal 0.2
CPT0090860003 Tumor 0.2
CPT0118180003 Normal 0.1
CPT0069370003 Normal 0.1
CPT0147600003 Normal 0.1
CPT0118650003 Normal 0.1
CPT0083420003 Normal 0.1
CPT0090370003 Normal 0.1
CPT0014930003 Normal 0.1
CPT0090600003 Normal 0.1
CPT0068130003 Normal 0.1
CPT0111480003 Normal 0.1
CPT0089360003 Normal 0.1
CPT0147000003 Normal 0.1
CPT0000930003 Normal 0.1
CPT0110890003 Normal 0.1
CPT0092250003 Normal 0.1
CPT0148180004 Tumor 0.1
CPT0001590003 Normal 0.1
CPT0001070003 Normal 0.1
CPT0114010003 Normal 0.1
CPT0067950003 Normal 0.1
CPT0092940003 Normal 0.1
CPT0069720003 Normal 0.1
CPT0115090003 Normal 0.1
CPT0104650003 Normal 0.1
CPT0008420003 Normal 0.1
CPT0069360003 Tumor 0.1
CPT0118600003 Normal 0.1
CPT0086770003 Normal 0.1
CPT0146600003 Normal 0.1
CPT0148300003 Normal 0.1
CPT0001960003 Tumor 0.1
CPT0118010003 Normal 0.1
CPT0001580009 Tumor 0.0
CPT0068800003 Tumor 0.0
CPT0114840003 Tumor 0.0
CPT0109710003 Normal 0.0
CPT0021450003 Tumor 0.0
CPT0113990003 Tumor 0.0
CPT0118340003 Tumor 0.0
CPT0114880003 Normal 0.0
CPT0105600003 Tumor 0.0
CPT0147380004 Tumor 0.0
CPT0097580003 Tumor 0.0
CPT0008450003 Tumor 0.0
CPT0001380003 Tumor 0.0
CPT0091240003 Tumor 0.0
CPT0146800003 Normal 0.0
CPT0098130003 Tumor 0.0
CPT0067250003 Tumor 0.0
CPT0066890003 Tumor 0.0
CPT0105330003 Tumor 0.0
CPT0067940003 Tumor 0.0
CPT0001390003 Normal 0.0
CPT0013600003 Tumor 0.0
CPT0053040004 Tumor 0.0
CPT0021490003 Normal 0.0
CPT0118570003 Tumor 0.0
CPT0070060003 Tumor 0.0
CPT0112060003 Tumor 0.0
CPT0062810003 Normal 0.0
CPT0147100003 Normal 0.0
CPT0146700003 Normal 0.0
CPT0023310003 Tumor 0.0
CPT0092530003 Tumor 0.0
CPT0052170004 Tumor 0.0
CPT0114690003 Normal 0.0
CPT0063810003 Tumor 0.0
CPT0118200003 Tumor -0.1
CPT0110980004 Tumor -0.1
CPT0105510003 Tumor -0.1
CPT0117970003 Tumor -0.1
CPT0118810003 Tumor -0.1
CPT0111300003 Tumor -0.1
CPT0014260003 Tumor -0.1
CPT0102450003 Tumor -0.1
CPT0105710003 Tumor -0.1
CPT0082740004 Tumor -0.1
CPT0118160003 Tumor -0.1
CPT0105940003 Tumor -0.1
CPT0001810003 Normal -0.1
CPT0067070003 Tumor -0.1
CPT0067450003 Tumor -0.1
CPT0092930003 Tumor -0.1
CPT0083100003 Tumor -0.1
CPT0015410003 Tumor -0.1
CPT0146780004 Tumor -0.1
CPT0146980004 Tumor -0.2
CPT0105230003 Tumor -0.2
CPT0147980004 Tumor -0.2
CPT0008410003 Tumor -0.2
CPT0104970003 Tumor -0.2
CPT0084140003 Tumor -0.2
CPT0146880004 Tumor -0.2
CPT0104630003 Tumor -0.2
CPT0110860004 Tumor -0.2
CPT0000920017 Tumor -0.2
CPT0069520003 Tumor -0.2
CPT0068610003 Tumor -0.2
CPT0067620003 Tumor -0.2
CPT0001660013 Tumor -0.2
CPT0079830003 Tumor -0.2
CPT0109740004 Tumor -0.2
CPT0104750003 Tumor -0.2
CPT0013880003 Tumor -0.2
CPT0082850004 Tumor -0.2
CPT0063730003 Tumor -0.2
CPT0109680004 Tumor -0.3
CPT0083390004 Tumor -0.3
CPT0109720004 Tumor -0.3
CPT0147580004 Tumor -0.3
CPT0147880004 Tumor -0.3
CPT0105630003 Tumor -0.3
CPT0068100003 Tumor -0.3
CPT0118880003 Tumor -0.3
CPT0114660004 Tumor -0.3
CPT0086750003 Tumor -0.3
CPT0001800013 Tumor -0.3
CPT0148280004 Tumor -0.4
CPT0090170004 Tumor -0.4
CPT0090340003 Tumor -0.4
CPT0090570004 Tumor -0.4
CPT0066780003 Tumor -0.4
CPT0115070003 Tumor -0.4
CPT0086310003 Tumor -0.4
CPT0146680004 Tumor -0.4
CPT0109830004 Tumor -0.4
CPT0089340003 Tumor -0.4
CPT0011910004 Tumor -0.5
CPT0147480004 Tumor -0.5
CPT0147080004 Tumor -0.5
CPT0069700003 Tumor -0.5
CPT0001060010 Tumor -0.5
CPT0092240003 Tumor -0.5
CPT0055100004 Tumor -0.6
CPT0146580004 Tumor N/A
CPT0148080004 Tumor N/A
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LUNG SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples 212
Samples
Sample ID Sample type nRPX
CPT0175410003 Normal 0.8
CPT0223820003 Normal 0.8
CPT0069900003 Normal 0.6
CPT0204990003 Tumor 0.6
CPT0123370003 Normal 0.6
CPT0205000003 Normal 0.6
CPT0117770003 Normal 0.5
CPT0130440004 Normal 0.5
CPT0234580003 Normal 0.5
CPT0136660003 Normal 0.5
CPT0192590004 Normal 0.5
CPT0191930003 Normal 0.5
CPT0204820003 Normal 0.5
CPT0202040003 Normal 0.5
CPT0225470003 Normal 0.5
CPT0115860003 Normal 0.5
CPT0136640003 Tumor 0.5
CPT0241210003 Normal 0.5
CPT0130310003 Normal 0.5
CPT0197210003 Tumor 0.5
CPT0237780003 Normal 0.5
CPT0221220003 Normal 0.4
CPT0117720003 Tumor 0.4
CPT0079110003 Normal 0.4
CPT0068320003 Normal 0.4
CPT0191860003 Tumor 0.4
CPT0064050003 Normal 0.4
CPT0233330003 Normal 0.4
CPT0105430003 Normal 0.4
CPT0234950004 Normal 0.4
CPT0112730003 Normal 0.4
CPT0238110004 Tumor 0.4
CPT0202740003 Normal 0.4
CPT0175160003 Normal 0.4
CPT0208780003 Normal 0.4
CPT0111000004 Normal 0.4
CPT0227420003 Normal 0.4
CPT0186210003 Normal 0.4
CPT0245780003 Tumor 0.4
CPT0108600003 Normal 0.4
CPT0063440003 Normal 0.4
CPT0197100003 Normal 0.4
CPT0083990003 Normal 0.4
CPT0104930003 Tumor 0.4
CPT0245790003 Normal 0.4
CPT0063500003 Normal 0.4
CPT0245890003 Normal 0.4
CPT0104950003 Normal 0.4
CPT0126470003 Normal 0.4
CPT0222740003 Normal 0.3
CPT0098800003 Normal 0.3
CPT0112600003 Normal 0.3
CPT0175560003 Tumor 0.3
CPT0197740003 Tumor 0.3
CPT0147700003 Normal 0.3
CPT0196820003 Normal 0.3
CPT0237060004 Tumor 0.3
CPT0197150003 Tumor 0.3
CPT0195520003 Normal 0.3
CPT0091820003 Tumor 0.3
CPT0197090003 Tumor 0.3
CPT0104360003 Tumor 0.3
CPT0086270003 Normal 0.3
CPT0007760003 Normal 0.3
CPT0091090003 Normal 0.3
CPT0202220004 Normal 0.3
CPT0217490003 Normal 0.3
CPT0204660003 Normal 0.3
CPT0219390003 Normal 0.3
CPT0202400004 Normal 0.3
CPT0202170003 Tumor 0.3
CPT0186140003 Normal 0.3
CPT0209040003 Normal 0.3
CPT0202720003 Tumor 0.3
CPT0126450003 Tumor 0.3
CPT0091620003 Normal 0.3
CPT0063430003 Tumor 0.3
CPT0175390003 Tumor 0.3
CPT0087210003 Normal 0.3
CPT0146400003 Normal 0.3
CPT0237570003 Normal 0.3
CPT0237430003 Normal 0.2
CPT0175270003 Normal 0.2
CPT0232690003 Normal 0.2
CPT0112550003 Normal 0.2
CPT0197520003 Normal 0.2
CPT0023500003 Normal 0.2
CPT0010060003 Normal 0.2
CPT0237710003 Normal 0.2
CPT0236430003 Normal 0.2
CPT0191750003 Normal 0.2
CPT0233160003 Normal 0.2
CPT0221660003 Normal 0.2
CPT0197170003 Normal 0.2
CPT0237080003 Normal 0.2
CPT0112660003 Normal 0.2
CPT0130070003 Normal 0.2
CPT0128900003 Normal 0.2
CPT0227400003 Tumor 0.2
CPT0130030003 Tumor 0.2
CPT0126400003 Normal 0.2
CPT0234820003 Normal 0.2
CPT0233640003 Normal 0.2
CPT0238130003 Normal 0.2
CPT0091050003 Tumor 0.2
CPT0208770003 Tumor 0.2
CPT0202020008 Tumor 0.2
CPT0146500003 Normal 0.2
CPT0197860003 Normal 0.2
CPT0204600003 Tumor 0.2
CPT0010050003 Tumor 0.2
CPT0245840003 Normal 0.2
CPT0079060003 Normal 0.2
CPT0207250003 Normal 0.2
CPT0187380003 Normal 0.2
CPT0112720003 Tumor 0.1
CPT0102840003 Normal 0.1
CPT0023470003 Tumor 0.1
CPT0104380003 Normal 0.1
CPT0175260003 Tumor 0.1
CPT0183270003 Normal 0.1
CPT0227070003 Normal 0.1
CPT0112650003 Tumor 0.1
CPT0202580004 Normal 0.1
CPT0001030003 Normal 0.1
CPT0232670003 Tumor 0.1
CPT0089880003 Tumor 0.1
CPT0197380003 Normal 0.1
CPT0209510003 Normal 0.1
CPT0086260003 Tumor 0.1
CPT0218310003 Normal 0.1
CPT0126760003 Normal 0.1
CPT0245880003 Tumor 0.1
CPT0186180003 Tumor 0.1
CPT0146380004 Tumor 0.1
CPT0237210003 Normal 0.1
CPT0126830003 Normal 0.1
CPT0130410003 Tumor 0.0
CPT0147200003 Normal 0.0
CPT0217420003 Tumor 0.0
CPT0202350004 Tumor 0.0
CPT0126740003 Tumor 0.0
CPT0186130003 Tumor 0.0
CPT0123350003 Tumor 0.0
CPT0147180004 Tumor 0.0
CPT0221200003 Tumor 0.0
CPT0068280003 Tumor 0.0
CPT0234560003 Tumor 0.0
CPT0233600003 Tumor 0.0
CPT0236420003 Tumor 0.0
CPT0063480003 Tumor 0.0
CPT0237990003 Normal -0.1
CPT0209020004 Tumor -0.1
CPT0218280003 Tumor -0.1
CPT0234930004 Tumor -0.1
CPT0115830003 Tumor -0.1
CPT0079100003 Tumor -0.1
CPT0202530004 Tumor -0.1
CPT0126390003 Tumor -0.1
CPT0079050003 Tumor -0.1
CPT0187370003 Tumor -0.1
CPT0196810003 Tumor -0.1
CPT0090440003 Tumor -0.1
CPT0237690004 Tumor -0.1
CPT0001020003 Tumor -0.1
CPT0102790003 Tumor -0.1
CPT0241170003 Tumor -0.1
CPT0245830003 Tumor -0.1
CPT0105420003 Tumor -0.1
CPT0237760003 Tumor -0.1
CPT0219360003 Tumor -0.1
CPT0108560003 Tumor -0.1
CPT0183250004 Tumor -0.1
CPT0112580003 Tumor -0.1
CPT0221650003 Tumor -0.1
CPT0197480003 Tumor -0.1
CPT0083980003 Tumor -0.1
CPT0091610003 Tumor -0.1
CPT0126810003 Tumor -0.1
CPT0098770003 Tumor -0.2
CPT0195510003 Tumor -0.2
CPT0204800003 Tumor -0.2
CPT0007740003 Tumor -0.2
CPT0209490003 Tumor -0.2
CPT0233120003 Tumor -0.2
CPT0112540003 Tumor -0.2
CPT0234790003 Tumor -0.2
CPT0207210003 Tumor -0.2
CPT0130270003 Tumor -0.2
CPT0069890003 Tumor -0.2
CPT0175120003 Tumor -0.3
CPT0237410004 Tumor -0.3
CPT0192540004 Tumor -0.3
CPT0191710003 Tumor -0.3
CPT0190550003 Tumor -0.3
CPT0126670003 Tumor -0.3
CPT0223790003 Tumor -0.3
CPT0237970004 Tumor -0.3
CPT0233320003 Tumor -0.4
CPT0146480004 Tumor -0.4
CPT0111150004 Tumor -0.4
CPT0101130003 Tumor -0.4
CPT0225380003 Tumor -0.4
CPT0237550004 Tumor -0.4
CPT0128890003 Tumor -0.4
CPT0147680004 Tumor -0.4
CPT0237200004 Tumor -0.4
CPT0087190003 Tumor -0.5
CPT0064040003 Tumor -0.5
CPT0227020003 Tumor -0.6
CPT0126530003 Tumor -0.7
CPT0222730003 Tumor -0.8
Show allShow less
LUNG CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.


Antibody HPA041264

Antibody HPA041271

Antibody CAB002621
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Adenocarcinoma, NOS
Squamous cell carcinoma, NOS
Carcinoid, malignant, NOS
Neoplasm, malignant, NOS

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