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PLD1
HPA
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  • SUMMARY

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  • PLD1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PLD1
Synonyms
Gene descriptioni

Full gene name according to HGNC.

Phospholipase D1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Enzymes
Human disease related genes
Metabolic proteins
Plasma proteins
Potential drug targets
RAS pathway related proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 3
Cytoband q26.31
Chromosome location (bp) 171600404 - 171810950
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000075651 (version 109)
Entrez gene 5337
HGNC HGNC:9067
UniProt Q13393 (UniProt - Evidence at protein level)
neXtProt NX_Q13393
GeneCards PLD1
Antibodypedia PLD1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Function as phospholipase selective for phosphatidylcholine 1, 2, 3. Implicated as a critical step in numerous cellular pathways, including signal transduction, membrane trafficking, and the regulation of mitosis. May be involved in the regulation of perinuclear intravesicular membrane traffic (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Hydrolase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Lipid degradation, Lipid metabolism
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a phosphatidylcholine-specific phospholipase which catalyzes the hydrolysis of phosphatidylcholine in order to yield phosphatidic acid and choline. The enzyme may play a role in signal transduction and subcellular trafficking. Alternative splicing results in multiple transcript variants with both catalytic and regulatory properties. [provided by RefSeq, Sep 2011]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PLD1-201
ENSP00000342793
ENST00000351298
Q13393
[Direct mapping] Phospholipase D1
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
RAS pathway related proteins
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Congenital malformations of the circulatory system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000139 [Golgi membrane]
GO:0003824 [catalytic activity]
GO:0004630 [phospholipase D activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005765 [lysosomal membrane]
GO:0005768 [endosome]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005794 [Golgi apparatus]
GO:0005886 [plasma membrane]
GO:0006629 [lipid metabolic process]
GO:0006654 [phosphatidic acid biosynthetic process]
GO:0006935 [chemotaxis]
GO:0007264 [small GTPase mediated signal transduction]
GO:0007265 [Ras protein signal transduction]
GO:0009395 [phospholipid catabolic process]
GO:0012505 [endomembrane system]
GO:0016020 [membrane]
GO:0016042 [lipid catabolic process]
GO:0016324 [apical plasma membrane]
GO:0016787 [hydrolase activity]
GO:0030139 [endocytic vesicle]
GO:0031902 [late endosome membrane]
GO:0032534 [regulation of microvillus assembly]
GO:0035091 [phosphatidylinositol binding]
GO:0035579 [specific granule membrane]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045727 [positive regulation of translation]
GO:0048017 [inositol lipid-mediated signaling]
GO:0048471 [perinuclear region of cytoplasm]
GO:0060627 [regulation of vesicle-mediated transport]
GO:0070290 [N-acylphosphatidylethanolamine-specific phospholipase D activity]
GO:0070821 [tertiary granule membrane]
GO:0098693 [regulation of synaptic vesicle cycle]
GO:0098981 [cholinergic synapse]
Show all
1074 aa
124.2 kDa
No 0
PLD1-202
ENSP00000348681
ENST00000356327
Q13393
[Direct mapping] Phospholipase D1
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
RAS pathway related proteins
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Congenital malformations of the circulatory system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000139 [Golgi membrane]
GO:0003824 [catalytic activity]
GO:0004630 [phospholipase D activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005765 [lysosomal membrane]
GO:0005768 [endosome]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005794 [Golgi apparatus]
GO:0005886 [plasma membrane]
GO:0006629 [lipid metabolic process]
GO:0006654 [phosphatidic acid biosynthetic process]
GO:0006935 [chemotaxis]
GO:0007264 [small GTPase mediated signal transduction]
GO:0007265 [Ras protein signal transduction]
GO:0009395 [phospholipid catabolic process]
GO:0012505 [endomembrane system]
GO:0016020 [membrane]
GO:0016042 [lipid catabolic process]
GO:0016324 [apical plasma membrane]
GO:0016787 [hydrolase activity]
GO:0030139 [endocytic vesicle]
GO:0031902 [late endosome membrane]
GO:0032534 [regulation of microvillus assembly]
GO:0035091 [phosphatidylinositol binding]
GO:0035579 [specific granule membrane]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045727 [positive regulation of translation]
GO:0048017 [inositol lipid-mediated signaling]
GO:0048471 [perinuclear region of cytoplasm]
GO:0060627 [regulation of vesicle-mediated transport]
GO:0070290 [N-acylphosphatidylethanolamine-specific phospholipase D activity]
GO:0070821 [tertiary granule membrane]
GO:0098693 [regulation of synaptic vesicle cycle]
GO:0098981 [cholinergic synapse]
Show all
1036 aa
119.7 kDa
No 0
PLD1-203
ENSP00000400639
ENST00000418087
C9IY79
[Direct mapping] Phospholipase D1
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
RAS pathway related proteins
Human disease related genes
   Congenital malformations
   Congenital malformations of the circulatory system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0035091 [phosphatidylinositol binding]
Show all
141 aa
16.5 kDa
No 0
PLD1-205
ENSP00000395556
ENST00000446289
H7C0L3
[Direct mapping] Phospholipase D
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
RAS pathway related proteins
Human disease related genes
   Congenital malformations
   Congenital malformations of the circulatory system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003824 [catalytic activity]
GO:0004630 [phospholipase D activity]
GO:0005737 [cytoplasm]
GO:0016042 [lipid catabolic process]
GO:0016787 [hydrolase activity]
GO:0043229 [intracellular organelle]
GO:0070290 [N-acylphosphatidylethanolamine-specific phospholipase D activity]
Show all
234 aa
26.2 kDa
No 0
PLD1-216
ENSP00000486967
ENST00000627725
F8WBV7
[Direct mapping] Phospholipase D1
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
RAS pathway related proteins
Human disease related genes
   Congenital malformations
   Congenital malformations of the circulatory system
Protein evidence (Ezkurdia et al 2014)
Show all
57 aa
6.5 kDa
No 0

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