HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:6.1 nTPM
HPA Brain:36.3 nTPM
GTEx:6.1 nTPM
FANTOM5:24.3 Scaled Tags Per Million
Pig:0.9 nTPM
Mouse:1.1 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006554
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 36.3
Sample id Sample description nTPM
Hippocampus
nTPM: 29.6
2529 Female, age 94, left hemisphere 36.4
1911 Female, age 85, right hemisphere 34.3
2148 Female, age 91, left hemisphere 33.6
1898 Male, age 80, left hemisphere 26.8
2621 Female, age 67, right hemisphere 24.5
1855 Male, age 76, left hemisphere 22.0
Dentate gyrus
nTPM: 29.9
2528 Male, age 74, both hemispheres 39.4
2246 Female, age 85, both hemispheres 33.0
2010 Male, age 76, both hemispheres 29.2
2530 Female, age 94, left hemisphere 28.3
2531 Female, age 67, both hemispheres 25.4
1927 Female, age 91, both hemispheres 23.8
Entorhinal gyrus
nTPM: 29.4
2686 Male, age 75, right hemisphere 33.7
2117 Female, age 91, right hemisphere 32.7
2764 Male, age 80, right hemisphere 32.3
1787 Male, age 76, left hemisphere 30.7
1938 Female, age 85, left hemisphere 25.4
2613 Female, age 94, left hemisphere 21.9
Hippocampus, CA1
nTPM: 29.1
2082 Female, age 91, right hemisphere 40.5
2527 Male, age 74, both hemispheres 40.5
1873 Female, age 85, both hemispheres 32.1
2045 Male, age 76, both hemispheres 19.2
2749 Male, age 80, left hemisphere 13.4
Hippocampus, CA2
nTPM: 31.9
1940 Female, age 85, left hemisphere 43.3
2113 Female, age 91, right hemisphere 40.7
2249 Male, age 74, both hemispheres 34.1
1963 Male, age 80, left hemisphere 29.2
2437 Female, age 94, left hemisphere 28.7
1892 Male, age 76, both hemispheres 15.2
Hippocampus, CA3
nTPM: 31.4
2436 Male, age 74, both hemispheres 46.0
1891 Female, age 85, both hemispheres 40.5
2861 Female, age 67, both hemispheres 34.4
2620 Female, age 94, left hemisphere 26.0
1867 Male, age 76, both hemispheres 24.6
2137 Male, age 80, left hemisphere 16.7
Parahippocampal cortex
nTPM: 31.6
2692 Male, age 74, both hemispheres 58.4
2622 Female, age 67, right hemisphere 40.2
2018 Male, age 76, both hemispheres 35.8
1990 Female, age 91, right hemisphere 31.7
1933 Female, age 85, both hemispheres 28.2
1850 Male, age 80, both hemispheres 26.4
2250 Female, age 67, right hemisphere 25.1
2532 Female, age 72, left hemisphere 24.9
2693 Female, age 94, both hemispheres 23.2
2245 Female, age 91, both hemispheres 22.4
Perirhinal gyrus
nTPM: 22.5
1794 Male, age 80, right hemisphere 24.8
1847 Female, age 91, left hemisphere 24.7
2848 Male, age 76, right hemisphere 22.0
2521 Female, age 94, right hemisphere 21.0
1841 Female, age 85, right hemisphere 19.8
Subiculum
nTPM: 36.3
2619 Male, age 74, both hemispheres 57.2
2729 Female, age 91, right hemisphere 39.2
2042 Male, age 76, both hemispheres 33.8
2438 Female, age 94, left hemisphere 31.0
1901 Male, age 80, both hemispheres 30.7
1977 Female, age 85, both hemispheres 26.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 6.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.1
Samples: 197

Max nTPM: 13.6
Min nTPM: 1.4
Std nTPM: 2.2
Median nTPM: 5.8
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 13.6
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 12.7
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 12.5
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 12.3
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 11.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 11.6
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 11.0
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 10.8
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 10.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 10.6
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 10.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 24.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.3
FF:10153-102I9 76 years, female 34.1
FF:10169-103B7 60 years, female 14.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 0.9
Pig sample Sample description nTPM
Subiculum
nTPM: 0.9
Samples: 4

Max nTPM: 1.2
Min nTPM: 0.6
Sample A Female 0.8
Sample B Female 0.6
Sample C Male 1.1
Sample D Male 1.2
Dorsal hippocampus
nTPM: 0.8
Samples: 4

Max nTPM: 1.1
Min nTPM: 0.6
Sample A Female 0.6
Sample B Female 0.7
Sample C Male 0.7
Sample D Male 1.1
Entorhinal cortex
nTPM: 0.6
Samples: 4

Max nTPM: 1.0
Min nTPM: 0.4
Sample A Female 1.0
Sample B Female 0.4
Sample C Male 0.7
Sample D Male 0.4
Ventral hippocampus
nTPM: 0.8
Samples: 4

Max nTPM: 1.3
Min nTPM: 0.6
Sample A Female 0.6
Sample B Female 0.8
Sample C Male 1.3
Sample D Male 0.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.0
Samples: 4

Max nTPM: 1.2
Min nTPM: 0.7
Sample A Male 1.2
Sample B Male 0.8
Sample C Female 0.7
Sample D Female 1.2
Hippocampal formation
nTPM: 1.1
Samples: 4

Max nTPM: 2.0
Min nTPM: 0.6
Sample A Male 0.6
Sample B Male 0.6
Sample C Female 1.1
Sample D Female 2.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69514648 Antisense, RP_050419_03_G08, Mouse strain C57BL/6J (56 days, male) 0.1
74881515 Antisense, RP_060315_04_C03, Mouse strain C57BL/6J (56 days, male) 0.1

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