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DCX
HPA
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  • DCX
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

DCX
Synonyms DBCN, DC, LISX, SCLH, XLIS
Gene descriptioni

Full gene name according to HGNC.

Doublecortin
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome X
Cytoband q23
Chromosome location (bp) 111293779 - 111412429
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

13
Ensembl ENSG00000077279 (version 109)
Entrez gene 1641
HGNC HGNC:2714
UniProt O43602 (UniProt - Evidence at protein level)
neXtProt NX_O43602
GeneCards DCX
Antibodypedia DCX antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Microtubule-associated protein required for initial steps of neuronal dispersion and cortex lamination during cerebral cortex development. May act by competing with the putative neuronal protein kinase DCLK1 in binding to a target protein. May in that way participate in a signaling pathway that is crucial for neuronal interaction before and during migration, possibly as part of a calcium ion-dependent signal transduction pathway. May be part with PAFAH1B1/LIS-1 of overlapping, but distinct, signaling pathways that promote neuronal migration.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Developmental protein
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Differentiation, Neurogenesis
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a member of the doublecortin family. The protein encoded by this gene is a cytoplasmic protein and contains two doublecortin domains, which bind microtubules. In the developing cortex, cortical neurons must migrate over long distances to reach the site of their final differentiation. The encoded protein appears to direct neuronal migration by regulating the organization and stability of microtubules. In addition, the encoded protein interacts with LIS1, the regulatory gamma subunit of platelet activating factor acetylhydrolase, and this interaction is important to proper microtubule function in the developing cortex. Mutations in this gene cause abnormal migration of neurons during development and disrupt the layering of the cortex, leading to epilepsy, cognitive disability, subcortical band heterotopia (""double cortex"" syndrome) in females and lissencephaly (""smooth brain"" syndrome) in males. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2010]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
DCX-201
ENSP00000348553
ENST00000356220
A8K340
[Direct mapping] Neuronal migration protein doublecortin; cDNA FLJ77057, highly similar to Homo sapiens doublecortex; lissencephaly, X-linked (doublecortin) (DCX), transcript variant 2, mRNA
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001764 [neuron migration]
GO:0005737 [cytoplasm]
GO:0008017 [microtubule binding]
GO:0035082 [axoneme assembly]
GO:0035556 [intracellular signal transduction]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0060041 [retina development in camera-type eye]
Show all
366 aa
40.7 kDa
No 0
DCX-202
ENSP00000350776
ENST00000358070
O43602
[Direct mapping] Neuronal migration protein doublecortin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001764 [neuron migration]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0005875 [microtubule associated complex]
GO:0005930 [axoneme]
GO:0007399 [nervous system development]
GO:0007417 [central nervous system development]
GO:0008017 [microtubule binding]
GO:0019901 [protein kinase binding]
GO:0030154 [cell differentiation]
GO:0035082 [axoneme assembly]
GO:0035556 [intracellular signal transduction]
GO:0042461 [photoreceptor cell development]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0060041 [retina development in camera-type eye]
Show all
420 aa
46.8 kDa
No 0
DCX-203
ENSP00000361061
ENST00000371993
A0A804CF28
[Direct mapping] Neuronal migration protein doublecortin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001764 [neuron migration]
GO:0005737 [cytoplasm]
GO:0008017 [microtubule binding]
GO:0035082 [axoneme assembly]
GO:0035556 [intracellular signal transduction]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0060041 [retina development in camera-type eye]
Show all
319 aa
35.6 kDa
No 0
DCX-204
ENSP00000418811
ENST00000468911
E7EU50
[Direct mapping] Neuronal migration protein doublecortin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005737 [cytoplasm]
GO:0035556 [intracellular signal transduction]
GO:0042995 [cell projection]
Show all
310 aa
34.8 kDa
No 0
DCX-205
ENSP00000419861
ENST00000488120
O43602
[Direct mapping] Neuronal migration protein doublecortin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001764 [neuron migration]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0005875 [microtubule associated complex]
GO:0005930 [axoneme]
GO:0007399 [nervous system development]
GO:0007417 [central nervous system development]
GO:0008017 [microtubule binding]
GO:0019901 [protein kinase binding]
GO:0030154 [cell differentiation]
GO:0035082 [axoneme assembly]
GO:0035556 [intracellular signal transduction]
GO:0042461 [photoreceptor cell development]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0060041 [retina development in camera-type eye]
Show all
360 aa
40 kDa
No 0
DCX-206
ENSP00000490448
ENST00000496551
O43602
[Direct mapping] Neuronal migration protein doublecortin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001764 [neuron migration]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0005875 [microtubule associated complex]
GO:0005930 [axoneme]
GO:0007399 [nervous system development]
GO:0007417 [central nervous system development]
GO:0008017 [microtubule binding]
GO:0019901 [protein kinase binding]
GO:0030154 [cell differentiation]
GO:0035082 [axoneme assembly]
GO:0035556 [intracellular signal transduction]
GO:0042461 [photoreceptor cell development]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0060041 [retina development in camera-type eye]
Show all
425 aa
47.4 kDa
No 0
DCX-207
ENSP00000489635
ENST00000635795
O43602
[Direct mapping] Neuronal migration protein doublecortin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001764 [neuron migration]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0005875 [microtubule associated complex]
GO:0005930 [axoneme]
GO:0007399 [nervous system development]
GO:0007417 [central nervous system development]
GO:0008017 [microtubule binding]
GO:0019901 [protein kinase binding]
GO:0030154 [cell differentiation]
GO:0035082 [axoneme assembly]
GO:0035556 [intracellular signal transduction]
GO:0042461 [photoreceptor cell development]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0060041 [retina development in camera-type eye]
Show all
365 aa
40.6 kDa
No 0
DCX-208
ENSP00000490614
ENST00000636035
A8K340
[Direct mapping] Neuronal migration protein doublecortin; cDNA FLJ77057, highly similar to Homo sapiens doublecortex; lissencephaly, X-linked (doublecortin) (DCX), transcript variant 2, mRNA
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001764 [neuron migration]
GO:0005737 [cytoplasm]
GO:0007420 [brain development]
GO:0008017 [microtubule binding]
GO:0021766 [hippocampus development]
GO:0021819 [layer formation in cerebral cortex]
GO:0021860 [pyramidal neuron development]
GO:0021952 [central nervous system projection neuron axonogenesis]
GO:0035082 [axoneme assembly]
GO:0035556 [intracellular signal transduction]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0048675 [axon extension]
GO:0048813 [dendrite morphogenesis]
GO:0060041 [retina development in camera-type eye]
Show all
366 aa
40.7 kDa
No 0
DCX-209
ENSP00000490068
ENST00000636381
E7EU50
[Direct mapping] Neuronal migration protein doublecortin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005737 [cytoplasm]
GO:0035556 [intracellular signal transduction]
GO:0042995 [cell projection]
Show all
310 aa
34.8 kDa
No 0
DCX-210
ENSP00000490357
ENST00000637453
A8K340
[Direct mapping] Neuronal migration protein doublecortin; cDNA FLJ77057, highly similar to Homo sapiens doublecortex; lissencephaly, X-linked (doublecortin) (DCX), transcript variant 2, mRNA
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001764 [neuron migration]
GO:0005737 [cytoplasm]
GO:0008017 [microtubule binding]
GO:0035082 [axoneme assembly]
GO:0035556 [intracellular signal transduction]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0060041 [retina development in camera-type eye]
Show all
366 aa
40.7 kDa
No 0
DCX-211
ENSP00000490878
ENST00000637570
A0A1B0GWD1
[Direct mapping] Neuronal migration protein doublecortin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001764 [neuron migration]
GO:0005737 [cytoplasm]
GO:0008017 [microtubule binding]
GO:0035082 [axoneme assembly]
GO:0035556 [intracellular signal transduction]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0060041 [retina development in camera-type eye]
Show all
361 aa
40.1 kDa
No 0
DCX-212
ENSP00000505501
ENST00000680476
A0A7P0T9C5
[Direct mapping] Neuronal migration protein doublecortin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001764 [neuron migration]
GO:0005737 [cytoplasm]
GO:0008017 [microtubule binding]
GO:0035082 [axoneme assembly]
GO:0035556 [intracellular signal transduction]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0060041 [retina development in camera-type eye]
Show all
324 aa
36.1 kDa
No 0
DCX-213
ENSP00000516583
ENST00000706842
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0035556 [intracellular signal transduction]
Show all
121 aa
14 kDa
No 0

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