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JADE1
HPA
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  • JADE1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

JADE1
Synonyms JADE-1, PHF17
Gene descriptioni

Full gene name according to HGNC.

Jade family PHD finger 1
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 4
Cytoband q28.2
Chromosome location (bp) 128809700 - 128875224
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

13
Ensembl ENSG00000077684 (version 109)
Entrez gene 79960
HGNC HGNC:30027
UniProt Q6IE81 (UniProt - Evidence at protein level)
neXtProt NX_Q6IE81
GeneCards JADE1
Antibodypedia JADE1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Scaffold subunit of some HBO1 complexes, which have a histone H4 acetyltransferase activity 1, 2, 3, 4. Plays a key role in HBO1 complex by directing KAT7/HBO1 specificity towards histone H4 acetylation (H4K5ac, H4K8ac and H4K12ac), regulating DNA replication initiation, regulating DNA replication initiation 5, 6. May also promote acetylation of nucleosomal histone H4 by KAT5 7. Promotes apoptosis 8. May act as a renal tumor suppressor 9. Negatively regulates canonical Wnt signaling; at least in part, cooperates with NPHP4 in this function 10.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Activator
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Apoptosis, Transcription, Transcription regulation
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables transcription coactivator activity. Involved in histone acetylation and negative regulation of canonical Wnt signaling pathway. Acts upstream of or within negative regulation of G1/S transition of mitotic cell cycle. Located in several cellular components, including ciliary basal body; cytosol; and nuclear speck. Part of histone acetyltransferase complex. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
JADE1-201
ENSP00000226319
ENST00000226319
Q6IE81
[Direct mapping] Protein Jade-1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000123 [histone acetyltransferase complex]
GO:0001558 [regulation of cell growth]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0006275 [regulation of DNA replication]
GO:0006355 [regulation of DNA-templated transcription]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0006915 [apoptotic process]
GO:0016570 [histone modification]
GO:0016607 [nuclear speck]
GO:0030308 [negative regulation of cell growth]
GO:0036064 [ciliary basal body]
GO:0036408 [histone acetyltransferase activity (H3-K14 specific)]
GO:0042995 [cell projection]
GO:0043966 [histone H3 acetylation]
GO:0043981 [histone H4-K5 acetylation]
GO:0043982 [histone H4-K8 acetylation]
GO:0043983 [histone H4-K12 acetylation]
GO:0043995 [histone acetyltransferase activity (H4-K5 specific)]
GO:0043996 [histone acetyltransferase activity (H4-K8 specific)]
GO:0043997 [histone acetyltransferase activity (H4-K12 specific)]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0046872 [metal ion binding]
GO:0051726 [regulation of cell cycle]
GO:0090090 [negative regulation of canonical Wnt signaling pathway]
GO:2000134 [negative regulation of G1/S transition of mitotic cell cycle]
GO:2000278 [regulation of DNA biosynthetic process]
Show all
842 aa
95.5 kDa
No 0
JADE1-202
ENSP00000404211
ENST00000413543
Q6IE81
[Direct mapping] Protein Jade-1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000123 [histone acetyltransferase complex]
GO:0001558 [regulation of cell growth]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0006275 [regulation of DNA replication]
GO:0006355 [regulation of DNA-templated transcription]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0006915 [apoptotic process]
GO:0016570 [histone modification]
GO:0016607 [nuclear speck]
GO:0030308 [negative regulation of cell growth]
GO:0036064 [ciliary basal body]
GO:0036408 [histone acetyltransferase activity (H3-K14 specific)]
GO:0042995 [cell projection]
GO:0043966 [histone H3 acetylation]
GO:0043981 [histone H4-K5 acetylation]
GO:0043982 [histone H4-K8 acetylation]
GO:0043983 [histone H4-K12 acetylation]
GO:0043995 [histone acetyltransferase activity (H4-K5 specific)]
GO:0043996 [histone acetyltransferase activity (H4-K8 specific)]
GO:0043997 [histone acetyltransferase activity (H4-K12 specific)]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0046872 [metal ion binding]
GO:0051726 [regulation of cell cycle]
GO:0090090 [negative regulation of canonical Wnt signaling pathway]
GO:2000134 [negative regulation of G1/S transition of mitotic cell cycle]
GO:2000278 [regulation of DNA biosynthetic process]
Show all
509 aa
58.4 kDa
No 0
JADE1-203
ENSP00000388015
ENST00000452328
Q6IE81
[Direct mapping] Protein Jade-1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000123 [histone acetyltransferase complex]
GO:0001558 [regulation of cell growth]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0006275 [regulation of DNA replication]
GO:0006355 [regulation of DNA-templated transcription]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0006915 [apoptotic process]
GO:0016570 [histone modification]
GO:0016607 [nuclear speck]
GO:0030308 [negative regulation of cell growth]
GO:0036064 [ciliary basal body]
GO:0036408 [histone acetyltransferase activity (H3-K14 specific)]
GO:0042995 [cell projection]
GO:0043966 [histone H3 acetylation]
GO:0043981 [histone H4-K5 acetylation]
GO:0043982 [histone H4-K8 acetylation]
GO:0043983 [histone H4-K12 acetylation]
GO:0043995 [histone acetyltransferase activity (H4-K5 specific)]
GO:0043996 [histone acetyltransferase activity (H4-K8 specific)]
GO:0043997 [histone acetyltransferase activity (H4-K12 specific)]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0046872 [metal ion binding]
GO:0051726 [regulation of cell cycle]
GO:0090090 [negative regulation of canonical Wnt signaling pathway]
GO:2000134 [negative regulation of G1/S transition of mitotic cell cycle]
GO:2000278 [regulation of DNA biosynthetic process]
Show all
830 aa
94.1 kDa
No 0
JADE1-204
ENSP00000422445
ENST00000503785
D6RC05
[Direct mapping] Protein Jade-1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
129 aa
14.8 kDa
No 0
JADE1-205
ENSP00000426590
ENST00000504089
D6RFK0
[Direct mapping] Protein Jade-1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
136 aa
15.5 kDa
No 0
JADE1-206
ENSP00000424280
ENST00000507833
D6RBB3
[Direct mapping] Protein Jade-1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
131 aa
15 kDa
No 0
JADE1-207
ENSP00000425535
ENST00000508997
D6RCS1
[Direct mapping] Protein Jade-1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
119 aa
13.7 kDa
No 0
JADE1-208
ENSP00000421265
ENST00000510308
D6RGE7
[Direct mapping] Protein Jade-1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
143 aa
16.4 kDa
No 0
JADE1-209
ENSP00000423737
ENST00000511647
Q6IE81
[Direct mapping] Protein Jade-1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000123 [histone acetyltransferase complex]
GO:0001558 [regulation of cell growth]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0006275 [regulation of DNA replication]
GO:0006355 [regulation of DNA-templated transcription]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0006915 [apoptotic process]
GO:0016570 [histone modification]
GO:0016607 [nuclear speck]
GO:0030308 [negative regulation of cell growth]
GO:0036064 [ciliary basal body]
GO:0036408 [histone acetyltransferase activity (H3-K14 specific)]
GO:0042995 [cell projection]
GO:0043966 [histone H3 acetylation]
GO:0043981 [histone H4-K5 acetylation]
GO:0043982 [histone H4-K8 acetylation]
GO:0043983 [histone H4-K12 acetylation]
GO:0043995 [histone acetyltransferase activity (H4-K5 specific)]
GO:0043996 [histone acetyltransferase activity (H4-K8 specific)]
GO:0043997 [histone acetyltransferase activity (H4-K12 specific)]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0046872 [metal ion binding]
GO:0051726 [regulation of cell cycle]
GO:0090090 [negative regulation of canonical Wnt signaling pathway]
GO:2000134 [negative regulation of G1/S transition of mitotic cell cycle]
GO:2000278 [regulation of DNA biosynthetic process]
Show all
509 aa
58.4 kDa
No 0
JADE1-211
ENSP00000425730
ENST00000512960
Q6IE81
[Direct mapping] Protein Jade-1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000123 [histone acetyltransferase complex]
GO:0001558 [regulation of cell growth]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0006275 [regulation of DNA replication]
GO:0006355 [regulation of DNA-templated transcription]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0006915 [apoptotic process]
GO:0016570 [histone modification]
GO:0016607 [nuclear speck]
GO:0030308 [negative regulation of cell growth]
GO:0036064 [ciliary basal body]
GO:0036408 [histone acetyltransferase activity (H3-K14 specific)]
GO:0042995 [cell projection]
GO:0043966 [histone H3 acetylation]
GO:0043981 [histone H4-K5 acetylation]
GO:0043982 [histone H4-K8 acetylation]
GO:0043983 [histone H4-K12 acetylation]
GO:0043995 [histone acetyltransferase activity (H4-K5 specific)]
GO:0043996 [histone acetyltransferase activity (H4-K8 specific)]
GO:0043997 [histone acetyltransferase activity (H4-K12 specific)]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0046872 [metal ion binding]
GO:0051726 [regulation of cell cycle]
GO:0090090 [negative regulation of canonical Wnt signaling pathway]
GO:2000134 [negative regulation of G1/S transition of mitotic cell cycle]
GO:2000278 [regulation of DNA biosynthetic process]
Show all
842 aa
95.5 kDa
No 0
JADE1-212
ENSP00000426920
ENST00000514740
D6RE74
[Direct mapping] Protein Jade-1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
17 aa
1.9 kDa
No 0
JADE1-213
ENSP00000483219
ENST00000610919
Q6IE81
[Direct mapping] Protein Jade-1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000123 [histone acetyltransferase complex]
GO:0001558 [regulation of cell growth]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0006275 [regulation of DNA replication]
GO:0006355 [regulation of DNA-templated transcription]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0006915 [apoptotic process]
GO:0016570 [histone modification]
GO:0016607 [nuclear speck]
GO:0030308 [negative regulation of cell growth]
GO:0036064 [ciliary basal body]
GO:0036408 [histone acetyltransferase activity (H3-K14 specific)]
GO:0042995 [cell projection]
GO:0043966 [histone H3 acetylation]
GO:0043981 [histone H4-K5 acetylation]
GO:0043982 [histone H4-K8 acetylation]
GO:0043983 [histone H4-K12 acetylation]
GO:0043995 [histone acetyltransferase activity (H4-K5 specific)]
GO:0043996 [histone acetyltransferase activity (H4-K8 specific)]
GO:0043997 [histone acetyltransferase activity (H4-K12 specific)]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0046872 [metal ion binding]
GO:0051726 [regulation of cell cycle]
GO:0090090 [negative regulation of canonical Wnt signaling pathway]
GO:2000134 [negative regulation of G1/S transition of mitotic cell cycle]
GO:2000278 [regulation of DNA biosynthetic process]
Show all
842 aa
95.5 kDa
No 0
JADE1-214
ENSP00000482212
ENST00000611140
Q6IE81
[Direct mapping] Protein Jade-1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000123 [histone acetyltransferase complex]
GO:0001558 [regulation of cell growth]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0006275 [regulation of DNA replication]
GO:0006355 [regulation of DNA-templated transcription]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0006915 [apoptotic process]
GO:0016570 [histone modification]
GO:0016607 [nuclear speck]
GO:0030308 [negative regulation of cell growth]
GO:0036064 [ciliary basal body]
GO:0036408 [histone acetyltransferase activity (H3-K14 specific)]
GO:0042995 [cell projection]
GO:0043966 [histone H3 acetylation]
GO:0043981 [histone H4-K5 acetylation]
GO:0043982 [histone H4-K8 acetylation]
GO:0043983 [histone H4-K12 acetylation]
GO:0043995 [histone acetyltransferase activity (H4-K5 specific)]
GO:0043996 [histone acetyltransferase activity (H4-K8 specific)]
GO:0043997 [histone acetyltransferase activity (H4-K12 specific)]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0046872 [metal ion binding]
GO:0051726 [regulation of cell cycle]
GO:0090090 [negative regulation of canonical Wnt signaling pathway]
GO:2000134 [negative regulation of G1/S transition of mitotic cell cycle]
GO:2000278 [regulation of DNA biosynthetic process]
Show all
842 aa
95.5 kDa
No 0

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