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RBFOX1
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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:31.8 nTPM
HPA Brain:182.5 nTPM
GTEx:31.8 nTPM
FANTOM5:309.4 Scaled Tags Per Million
Pig:169.3 nTPM
Mouse:197.6 nTPM
Allen mouse:7.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA040809Antibody HPA075862
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

182.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 177.8
2846 Female, age 79, unknown 214.6
2290 Female, age 72, unknown 213.4
1857 Female, age 85, left hemisphere 203.6
1854 Male, age 80, left hemisphere 185.7
1781 Male, age 74, unknown 175.1
2289 Male, age 61, right hemisphere 166.5
2288 Male, age 75, left hemisphere 160.2
2481 Female, age 94, left hemisphere 103.0
Globus pallidus, externus
nTPM: 31.9
2395 Male, age 75, both hemispheres 40.5
2646 Male, age 61, right hemisphere 37.9
1996 Male, age 80, right hemisphere 28.5
2567 Female, age 72, unknown 26.2
2772 Female, age 79, unknown 26.2
Globus pallidus, internus
nTPM: 31.1
2483 Female, age 94, right hemisphere 61.7
2287 Male, age 75, right hemisphere 36.3
1818 Male, age 74, unknown 29.8
2037 Male, age 80, right hemisphere 28.0
2566 Female, age 72, unknown 26.6
2778 Female, age 91, both hemispheres 19.9
2111 Female, age 85, right hemisphere 15.1
Nucleus accumbens
nTPM: 162.5
1856 Female, age 91, right hemisphere 254.5
2824 Male, age 61, right hemisphere 207.4
1783 Male, age 74, unknown 192.7
1806 Female, age 85, left hemisphere 177.9
2698 Female, age 72, unknown 159.9
2286 Male, age 75, left hemisphere 150.7
2391 Female, age 94, left hemisphere 83.7
2732 Male, age 80, right hemisphere 73.2
Nucleus basalis of Meynert
nTPM: 131.3
2484 Female, age 94, left hemisphere 175.6
2393 Male, age 80, right hemisphere 173.6
2821 Male, age 75, both hemispheres 127.1
2569 Male, age 61, both hemispheres 48.9
Nucleus of the diagonal band
nTPM: 131.6
2029 Male, age 61, right hemisphere 162.4
1812 Female, age 91, both hemispheres 141.6
2195 Female, age 85, both hemispheres 136.2
2775 Male, age 80, right hemisphere 129.5
1979 Male, age 74, unknown 88.5
Putamen
nTPM: 182.5
1838 Male, age 80, right hemisphere 246.0
2466 Female, age 79, unknown 215.6
1937 Female, age 91, right hemisphere 206.5
1829 Male, age 74, unknown 203.0
2489 Female, age 72, unknown 159.5
2647 Male, age 75, left hemisphere 132.0
2482 Female, age 94, left hemisphere 114.7
Septal nuclei
nTPM: 107.6
1960 Male, age 74, unknown 154.7
2031 Female, age 72, unknown 147.4
2629 Female, age 94, right hemisphere 135.3
2009 Female, age 91, both hemispheres 121.8
2059 Female, age 85, both hemispheres 105.7
2394 Male, age 61, left hemisphere 55.4
2199 Male, age 80, right hemisphere 33.2
Stria terminalis, bed nucleus
nTPM: 122.6
2486 Female, age 94, both hemispheres 151.3
1974 Female, age 91, both hemispheres 146.3
2201 Male, age 74, unknown 70.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 28.0
Samples: 246

Max nTPM: 87.1
Min nTPM: 1.5
Std nTPM: 15.7
Median nTPM: 27.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 87.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 69.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 65.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 64.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 63.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 60.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 60.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 60.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 60.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 57.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 57.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 57.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 57.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 55.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 55.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 53.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 53.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 52.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 51.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 50.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 50.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 50.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 49.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 49.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 49.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 48.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 48.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 48.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 48.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 48.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 47.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 47.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 46.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 46.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 46.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 45.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 45.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 44.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 44.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 44.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 44.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 43.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 43.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 43.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 42.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 42.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 41.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 40.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 40.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 39.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 39.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 39.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 39.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 39.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 39.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 39.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 39.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 38.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 38.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 38.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 38.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 38.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 38.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 38.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 37.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 37.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 37.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 36.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 36.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 36.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 35.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 35.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 35.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 34.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 34.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 34.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 34.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 33.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 33.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 33.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 33.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 33.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 33.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 33.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 33.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 33.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 32.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 32.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 32.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 32.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 32.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 32.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 32.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 32.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 32.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 32.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 31.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 31.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 31.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 31.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 31.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 31.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 31.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 30.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 30.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 30.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 29.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 29.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 29.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 29.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 29.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 29.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 29.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 28.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 28.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 28.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 28.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 28.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 28.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 28.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 27.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 27.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 27.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 27.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 27.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 27.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 27.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 27.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 26.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 26.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 26.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 26.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 26.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 25.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 25.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 25.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 25.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 24.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 24.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 24.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 24.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 24.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 24.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 23.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 23.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 23.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 23.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 23.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 23.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 23.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 22.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 22.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 22.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 22.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 22.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 22.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 21.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 21.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 21.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 21.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 21.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 21.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 20.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 20.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 20.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 20.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 20.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 20.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 20.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 19.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 19.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 19.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 19.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 18.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 18.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 18.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 16.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 16.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 16.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 16.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 16.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 16.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 15.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 14.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 14.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 14.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 14.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 14.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 14.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 13.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 13.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 13.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 12.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 12.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 12.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 12.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 11.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 11.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 11.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 11.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 10.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 10.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 10.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 10.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 10.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 10.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 10.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 9.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 9.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 9.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 9.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 9.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 8.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 8.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 8.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 8.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 7.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 7.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 7.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 7.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 7.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 7.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 7.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 7.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 7.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 7.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 6.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 6.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 6.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 6.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 6.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 5.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 5.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 5.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 5.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 5.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 4.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 4.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 4.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 4.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 4.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 4.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 3.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 2.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 2.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 31.8
Samples: 246

Max nTPM: 81.3
Min nTPM: 0.7
Std nTPM: 17.2
Median nTPM: 32.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 81.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 78.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 77.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 75.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 72.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 68.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 65.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 64.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 61.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 60.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 60.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 59.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 58.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 57.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 57.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 56.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 56.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 56.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 55.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 54.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 54.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 54.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 53.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 52.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 52.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 52.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 51.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 51.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 51.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 51.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 51.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 50.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 50.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 50.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 49.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 49.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 49.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 49.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 49.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 49.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 49.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 48.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 48.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 48.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 48.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 48.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 48.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 48.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 48.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 47.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 47.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 47.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 47.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 47.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 47.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 45.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 44.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 44.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 44.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 43.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 43.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 43.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 43.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 43.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 43.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 42.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 42.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 42.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 42.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 42.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 42.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 42.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 42.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 41.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 41.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 41.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 40.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 40.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 40.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 40.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 40.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 40.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 39.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 39.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 39.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 39.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 39.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 39.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 39.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 39.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 39.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 38.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 38.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 38.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 37.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 37.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 37.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 37.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 36.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 36.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 36.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 36.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 36.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 35.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 35.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 35.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 35.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 35.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 35.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 34.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 34.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 34.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 34.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 34.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 34.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 33.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 33.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 33.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 33.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 33.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 33.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 32.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 32.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 32.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 32.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 32.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 32.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 32.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 31.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 31.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 31.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 31.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 31.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 30.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 30.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 30.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 30.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 29.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 29.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 29.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 29.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 28.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 28.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 27.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 27.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 27.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 27.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 26.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 26.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 26.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 26.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 25.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 25.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 25.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 25.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 25.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 25.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 25.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 25.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 25.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 24.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 24.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 24.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 24.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 23.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 23.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 22.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 22.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 22.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 22.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 22.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 22.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 22.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 21.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 21.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 21.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 21.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 20.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 20.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 20.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 19.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 19.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 19.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 18.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 18.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 18.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 17.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 17.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 17.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 16.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 16.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 15.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 15.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 15.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 15.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 14.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 14.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 14.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 14.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 14.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 14.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 12.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 12.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 12.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 12.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 11.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 11.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 11.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 11.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 10.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 10.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 10.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 9.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 9.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 9.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 8.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 8.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 8.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 7.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 7.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 7.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 7.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 7.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 7.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 7.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 6.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 6.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 6.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 5.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 5.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 5.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 5.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 5.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 4.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 4.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 4.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 4.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 2.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 2.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 2.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 2.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 2.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 2.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 0.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 0.7
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Brain - Putamen (basal ganglia)
Average nTPM: 26.7
Samples: 205

Max nTPM: 72.2
Min nTPM: 0.2
Std nTPM: 15.6
Median nTPM: 25.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 72.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 66.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 65.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 65.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 64.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 62.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 56.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 56.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 56.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 56.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 56.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 55.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 54.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 52.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 51.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 49.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 49.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 47.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 47.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 46.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 46.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 44.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 44.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 44.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 43.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 43.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 43.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 43.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 43.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 42.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 42.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 41.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 41.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 41.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 40.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 40.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 40.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 39.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 39.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 39.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 39.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 39.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 39.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 39.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 38.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 38.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 38.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 38.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 38.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 37.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 37.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 37.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 37.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 37.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 36.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 36.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 36.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 36.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 36.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 35.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 35.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 35.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 34.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 34.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 34.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 34.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 33.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 33.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 33.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 33.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 33.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 32.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 32.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 32.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 32.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 32.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 32.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 31.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 31.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 31.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 31.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 31.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 31.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 31.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 30.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 30.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 30.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 30.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 29.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 29.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 29.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 29.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 29.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 28.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 28.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 28.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 28.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 27.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 27.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 26.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 26.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 25.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 25.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 25.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 25.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 25.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 25.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 24.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 24.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 24.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 24.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 24.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 23.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 23.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 23.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 23.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 23.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 23.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 23.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 22.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 22.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 22.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 22.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 22.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 22.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 21.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 21.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 21.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 20.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 20.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 20.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 20.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 19.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 19.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 19.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 18.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 18.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 18.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 17.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 17.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 17.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 17.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 17.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 17.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 16.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 16.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 16.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 15.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 15.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 15.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 14.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 14.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 14.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 13.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 13.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 13.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 12.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 12.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 12.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 12.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 12.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 11.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 11.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 10.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 10.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 10.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 10.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 10.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 9.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 9.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 8.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 8.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 8.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 8.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 8.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 8.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 7.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 7.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 7.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 7.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 7.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 6.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 6.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 5.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 5.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 5.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 5.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 5.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 5.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 5.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 4.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 4.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 4.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 4.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 3.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 3.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 3.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 3.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 2.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 2.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 2.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 0.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 0.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 0.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

309.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 298.7
FF:10164-103B2 76 years, female 298.7
Nucleus accumbens
Scaled Tags Per Million: 256.4
FF:10037-101F1 23-56 years, mixed 256.4
Putamen
Scaled Tags Per Million: 309.4
FF:10176-103C5 60 years, female 309.4
Globus pallidus
Scaled Tags Per Million: 58.4
FF:10175-103C4 60 years, female 78.4
FF:10161-103A8 76 years, female 38.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

169.3
Pig sample Sample description nTPM
Caudate
nTPM: 131.8
Samples: 4

Max nTPM: 173.8
Min nTPM: 113.2
Sample A Female 113.2
Sample B Female 116.3
Sample C Male 173.8
Sample D Male 123.7
Putamen
nTPM: 169.3
Samples: 4

Max nTPM: 273.7
Min nTPM: 55.3
Sample A Female 55.3
Sample B Female 157.8
Sample C Male 273.7
Sample D Male 190.3
Septum
nTPM: 65.4
Samples: 4

Max nTPM: 92.2
Min nTPM: 27.2
Sample A Female 80.8
Sample B Female 92.2
Sample C Male 27.2
Sample D Male 61.2
Ventral pallidum
nTPM: 96.6
Samples: 4

Max nTPM: 140.0
Min nTPM: 57.6
Sample A Female 97.3
Sample B Female 140.0
Sample C Male 57.6
Sample D Male 91.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

197.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 197.6
Samples: 4

Max nTPM: 216.1
Min nTPM: 178.8
Sample A Male 213.9
Sample B Male 216.1
Sample C Female 178.8
Sample D Female 181.7
Septum
nTPM: 75.1
Samples: 4

Max nTPM: 83.7
Min nTPM: 67.2
Sample A Male 83.7
Sample B Male 69.1
Sample C Female 67.2
Sample D Female 80.3
Ventral forebrain
nTPM: 144.6
Samples: 4

Max nTPM: 155.1
Min nTPM: 135.5
Sample A Male 155.1
Sample B Male 135.5
Sample C Female 142.1
Sample D Female 145.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 7.8
71280790 Antisense, RP_050818_01_F02, Mouse strain C57BL/6J (56 days, male) 10.2
100145385 Antisense, RP_110519_02_F02, Mouse strain C57BL/6J (56 days, male) 5.4
Pallidum
Expression energy: 4.2
71280790 Antisense, RP_050818_01_F02, Mouse strain C57BL/6J (56 days, male) 6.0
100145385 Antisense, RP_110519_02_F02, Mouse strain C57BL/6J (56 days, male) 2.4

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