PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:384.9 nTPM
FANTOM5:367.6 Scaled Tags Per Million
Pig:206.9 nTPM
Mouse:263.5 nTPM
Allen mouse:6.6 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 384.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 282.0
1984 Male, age 76, both hemispheres 301.1
2090 Male, age 80, both hemispheres 280.9
2188 Female, age 91, both hemispheres 277.2
2301 Female, age 85, both hemispheres 268.6
Area postrema
nTPM: 256.2
2054 Male, age 76, both hemispheres 261.1
2799 Male, age 61, both hemispheres 258.1
2306 Male, age 80, both hemispheres 249.3
Dorsal cochlear nucleus
nTPM: 307.2
2802 Male, age 74, right hemisphere 326.7
2187 Female, age 91, both hemispheres 325.6
2370 Male, age 61, both hemispheres 312.0
2058 Male, age 76, both hemispheres 298.8
2378 Male, age 80, both hemispheres 272.7
Dorsal medullary reticular nucleus
nTPM: 319.6
2040 Female, age 85, both hemispheres 397.1
2373 Male, age 61, both hemispheres 287.7
2088 Male, age 76, both hemispheres 274.2
Dorsal motor vagal complex
nTPM: 296.8
2813 Female, age 72, unknown 342.3
2133 Female, age 91, both hemispheres 338.3
2844 Male, age 55, unknown 326.8
2000 Male, age 74, unknown 317.5
2797 Male, age 61, both hemispheres 302.0
2643 Male, age 74, both hemispheres 283.4
2185 Male, age 76, both hemispheres 262.0
2807 Female, age 85, both hemispheres 202.0
Dorsal tegmental nucleus
nTPM: 298.4
2358 Male, age 61, both hemispheres 340.5
2083 Male, age 80, both hemispheres 319.9
2326 Male, age 74, both hemispheres 268.4
1936 Male, age 76, left hemisphere 264.6
Dorsolateral tegmental area
nTPM: 294.7
2654 Male, age 80, both hemispheres 346.6
2751 Female, age 85, both hemispheres 312.8
2141 Male, age 76, both hemispheres 304.5
2360 Male, age 74, both hemispheres 256.7
2337 Male, age 61, both hemispheres 252.9
Gigantocellular reticular nuclei, medullary
nTPM: 302.1
1876 Female, age 85, both hemispheres 350.1
2462 Male, age 74, both hemispheres 326.7
2387 Female, age 91, both hemispheres 316.5
2022 Male, age 76, right hemisphere 292.1
2310 Male, age 80, both hemispheres 265.5
2314 Male, age 61, both hemispheres 261.7
Gigantocellular reticular nuclei, pars
nTPM: 299.2
2168 Male, age 76, both hemispheres 345.1
2336 Male, age 61, both hemispheres 325.8
2084 Female, age 85, both hemispheres 322.8
2706 Male, age 80, both hemispheres 260.3
2330 Male, age 80, both hemispheres 242.1
Inferior olive
nTPM: 307.7
2628 Female, age 91, both hemispheres 350.7
2563 Male, age 74, both hemispheres 336.5
2085 Female, age 85, both hemispheres 302.5
2178 Male, age 61, both hemispheres 281.4
2379 Male, age 80, both hemispheres 267.3
Kolliker-Fuse nucleus
nTPM: 296.9
2793 Female, age 91, left hemisphere 327.3
2163 Male, age 80, both hemispheres 325.4
2315 Male, age 76, right hemisphere 238.0
Lateral lemniscal nuclei
nTPM: 323.4
2169 Male, age 76, both hemispheres 388.3
2746 Female, age 85, left hemisphere 339.6
2453 Male, age 74, right hemisphere 314.0
2036 Male, age 80, both hemispheres 311.2
2320 Female, age 91, left hemisphere 263.7
Lateral medullary reticular nucleus
nTPM: 314.3
2044 Male, age 76, both hemispheres 356.0
2374 Male, age 61, both hemispheres 341.8
2804 Female, age 91, both hemispheres 312.3
2190 Female, age 85, both hemispheres 298.4
2305 Male, age 74, both hemispheres 295.9
2852 Male, age 80, both hemispheres 281.7
Lateral parabrachial nucleus
nTPM: 300.0
2139 Female, age 85, right hemisphere 362.1
2013 Male, age 80, both hemispheres 320.2
2790 Male, age 61, both hemispheres 273.8
2792 Male, age 76, both hemispheres 244.0
Lateral vestibular nucleus
nTPM: 287.6
2311 Male, age 80, both hemispheres 290.2
2184 Male, age 76, both hemispheres 285.0
Locus coeruleus
nTPM: 384.9
2720 Male, age 74, both hemispheres 458.5
2014 Male, age 55, unknown 430.8
2123 Female, age 91, both hemispheres 418.2
1980 Male, age 76, both hemispheres 372.2
2162 Male, age 80, both hemispheres 354.2
2317 Female, age 72, unknown 341.4
2788 Male, age 74, unknown 318.7
Medial olivary nucleus
nTPM: 275.7
2851 Male, age 80, both hemispheres 313.2
1962 Male, age 76, both hemispheres 278.7
2138 Female, age 91, both hemispheres 278.4
1943 Male, age 61, both hemispheres 232.4
Medial parabrachial nucleus
nTPM: 322.1
2170 Female, age 91, both hemispheres 366.5
2854 Male, age 80, both hemispheres 356.5
2156 Male, age 61, both hemispheres 298.2
2463 Female, age 85, right hemisphere 296.1
2786 Male, age 76, both hemispheres 293.2
Medial periolivary nuclei
nTPM: 311.9
2171 Female, age 85, both hemispheres 377.9
2063 Male, age 76, both hemispheres 366.7
2791 Male, age 74, right hemisphere 281.3
2081 Male, age 80, both hemispheres 267.6
2458 Female, age 91, both hemispheres 266.2
Medial vestibular nucleus
nTPM: 344.3
2624 Male, age 61, both hemispheres 406.1
2801 Male, age 74, both hemispheres 377.9
2803 Female, age 91, both hemispheres 358.9
2743 Female, age 85, both hemispheres 324.5
2134 Male, age 76, both hemispheres 302.6
2093 Male, age 80, both hemispheres 295.6
Motor facial nucleus
nTPM: 318.8
2365 Male, age 74, right hemisphere 367.5
2062 Male, age 76, both hemispheres 363.6
2697 Female, age 85, both hemispheres 344.1
2795 Female, age 91, both hemispheres 307.5
2126 Male, age 61, both hemispheres 277.9
2327 Male, age 80, both hemispheres 252.4
Motor hypoglossal nucleus
nTPM: 329.3
2461 Male, age 61, both hemispheres 397.8
2125 Female, age 91, both hemispheres 356.4
2182 Male, age 80, both hemispheres 318.3
2132 Female, age 85, both hemispheres 317.5
2277 Male, age 76, both hemispheres 256.7
Motor trigeminal nucleus
nTPM: 280.9
2560 Male, age 74, both hemispheres 316.6
2079 Male, age 80, both hemispheres 286.5
2335 Male, age 61, both hemispheres 285.9
2309 Male, age 76, both hemispheres 269.3
2321 Female, age 91, both hemispheres 246.4
Nuclei of the trapezoid body
nTPM: 329.2
2159 Male, age 61, both hemispheres 377.2
1983 Male, age 76, both hemispheres 359.8
2735 Female, age 85, both hemispheres 350.2
2368 Female, age 91, both hemispheres 284.2
2166 Male, age 80, both hemispheres 274.6
Nucleus ambiguus
nTPM: 271.4
2096 Female, age 85, both hemispheres 287.2
2071 Male, age 76, both hemispheres 255.6
Nucleus cuneatus
nTPM: 281.7
2562 Male, age 61, both hemispheres 324.3
2131 Male, age 76, both hemispheres 322.6
2564 Male, age 74, both hemispheres 315.2
2100 Male, age 76, both hemispheres 287.8
2381 Male, age 80, both hemispheres 271.5
2805 Female, age 91, both hemispheres 269.1
2376 Male, age 61, both hemispheres 258.6
2380 Male, age 80, both hemispheres 252.4
2808 Female, age 85, both hemispheres 233.6
Nucleus gracilis
nTPM: 258.9
2627 Male, age 74, both hemispheres 332.2
2382 Male, age 80, both hemispheres 241.4
2299 Female, age 85, both hemispheres 203.0
Nucleus raphe magnus
nTPM: 339.1
2172 Female, age 85, both hemispheres 416.6
2160 Male, age 61, both hemispheres 388.8
2455 Male, age 74, both hemispheres 342.1
2051 Male, age 76, both hemispheres 323.8
2328 Male, age 80, both hemispheres 292.2
2459 Female, age 91, both hemispheres 271.1
Nucleus raphe obscurus
nTPM: 278.2
2845 Female, age 85, midline 313.3
2800 Male, age 61, midline 300.8
2142 Male, age 76, midline 220.6
Nucleus raphe pallidus
nTPM: 315.7
2183 Male, age 80, midline 342.3
1924 Male, age 61, midline 334.9
2145 Male, age 76, midline 269.9
Nucleus tractus solitarii
nTPM: 260.8
2656 Male, age 76, both hemispheres 315.2
2144 Female, age 91, right hemisphere 284.5
2191 Female, age 85, both hemispheres 223.0
2307 Male, age 80, both hemispheres 220.4
Paramedian reticular nucleus
nTPM: 323.2
2050 Female, age 85, both hemispheres 413.3
2057 Male, age 80, both hemispheres 313.5
2313 Male, age 61, both hemispheres 308.0
2052 Male, age 76, both hemispheres 257.9
Parvicellular reticular nuclei
nTPM: 301.1
2558 Male, age 74, both hemispheres 311.4
2119 Male, age 80, both hemispheres 308.9
2095 Male, age 76, both hemispheres 283.0
Parvicellular reticular nuclei, medullary
nTPM: 329.8
2189 Female, age 91, both hemispheres 349.5
2091 Female, age 85, both hemispheres 332.4
2181 Male, age 80, left hemisphere 307.4
Pedunculopontine tegmental nucleus
nTPM: 313.2
1921 Female, age 85, both hemispheres 348.9
2334 Male, age 80, both hemispheres 310.6
2338 Male, age 61, both hemispheres 280.1
Peritrigeminal nucleus
nTPM: 309.4
2067 Female, age 85, both hemispheres 327.5
2136 Male, age 76, both hemispheres 306.5
2179 Male, age 61, both hemispheres 294.2
Pontine nuclei
nTPM: 345.3
2787 Female, age 85, both hemispheres 469.0
1863 Male, age 55, unknown 421.0
1968 Male, age 76, left hemisphere 351.4
2727 Male, age 61, right hemisphere 332.5
2109 Female, age 72, unknown 331.3
2454 Male, age 74, left hemisphere 307.9
2319 Female, age 91, both hemispheres 283.9
2115 Male, age 80, left hemisphere 265.5
Pontine raphe nucleus
nTPM: 338.8
2122 Female, age 85, midline 353.8
2853 Male, age 76, midline 323.9
Posteroventral cochlear nucleus
nTPM: 271.0
2752 Female, age 85, both hemispheres 324.8
2070 Male, age 76, both hemispheres 284.9
2371 Male, age 61, both hemispheres 281.2
2341 Male, age 80, both hemispheres 239.5
2135 Female, age 91, both hemispheres 224.7
Prepositus hypoglossal nucleus
nTPM: 298.4
2855 Female, age 85, right hemisphere 321.7
2086 Male, age 80, both hemispheres 275.0
Principal sensory trigeminal nucleus
nTPM: 314.6
2158 Male, age 61, both hemispheres 388.3
2008 Male, age 80, left hemisphere 302.6
2367 Female, age 91, left hemisphere 292.6
2324 Male, age 76, both hemispheres 275.1
Reticular pontine nucleus, caudal
nTPM: 280.7
2092 Male, age 76, both hemispheres 297.9
2559 Male, age 74, both hemispheres 283.3
2332 Male, age 80, right hemisphere 282.8
2457 Female, age 91, both hemispheres 258.8
Reticular pontine nucleus, oral
nTPM: 335.4
2361 Male, age 74, both hemispheres 365.7
1939 Male, age 80, both hemispheres 355.7
2012 Female, age 85, both hemispheres 354.9
2167 Male, age 76, both hemispheres 317.6
2366 Female, age 91, both hemispheres 283.0
Reticulotegmental nucleus
nTPM: 299.3
2452 Male, age 74, both hemispheres 309.4
2322 Female, age 91, both hemispheres 304.2
2325 Male, age 76, both hemispheres 296.9
2333 Male, age 80, both hemispheres 286.8
Spinal trigeminal nucleus, caudal
nTPM: 288.7
2447 Male, age 76, both hemispheres 333.6
2390 Female, age 91, both hemispheres 329.7
2308 Male, age 80, both hemispheres 268.4
2312 Male, age 61, both hemispheres 259.9
2642 Male, age 74, both hemispheres 251.9
Spinal trigeminal nucleus, interpolar
nTPM: 358.5
2625 Male, age 61, both hemispheres 437.4
2066 Male, age 76, right hemisphere 378.0
2033 Male, age 80, both hemispheres 345.0
2389 Female, age 91, both hemispheres 320.7
2386 Female, age 85, both hemispheres 311.6
Spinal trigeminal nucleus, oral
nTPM: 288.5
1978 Male, age 76, both hemispheres 305.0
2737 Female, age 85, both hemispheres 287.4
2164 Male, age 80, both hemispheres 273.0
Spinal vestibular nucleus
nTPM: 320.3
2186 Female, age 91, both hemispheres 345.4
2796 Male, age 61, both hemispheres 345.0
2780 Male, age 80, both hemispheres 318.1
2748 Male, age 76, both hemispheres 314.8
2806 Female, age 85, both hemispheres 312.3
2384 Male, age 74, both hemispheres 286.4
Subcoeruleus area
nTPM: 323.3
2323 Female, age 91, left hemisphere 366.5
1958 Male, age 80, both hemispheres 346.3
2369 Female, age 85, left hemisphere 317.5
2089 Male, age 76, left hemisphere 295.0
2451 Male, age 74, both hemispheres 291.1
Superior olive
nTPM: 329.4
1875 Female, age 85, both hemispheres 406.7
2364 Male, age 74, right hemisphere 355.2
2020 Male, age 76, both hemispheres 310.1
2561 Female, age 91, both hemispheres 296.8
2329 Male, age 80, right hemisphere 278.1
Superior vestibular nucleus
nTPM: 284.4
2015 Male, age 80, both hemispheres 306.1
2383 Male, age 74, both hemispheres 287.5
2061 Male, age 76, both hemispheres 259.6
Ventral medullary reticular nucleus
nTPM: 302.7
2060 Male, age 76, both hemispheres 317.4
2372 Male, age 61, both hemispheres 288.0
Ventral periolivary nuclei
nTPM: 317.9
2130 Female, age 85, both hemispheres 395.8
2165 Male, age 80, both hemispheres 330.6
2023 Male, age 76, both hemispheres 290.0
2794 Female, age 91, left hemisphere 255.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 300.9
2741 Female, age 85, both hemispheres 331.1
1986 Male, age 76, both hemispheres 318.8
2180 Male, age 61, both hemispheres 307.9
2302 Female, age 91, both hemispheres 279.7
2118 Male, age 80, both hemispheres 267.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 322.9
2840 Female, age 85, both hemispheres 387.4
2359 Male, age 61, both hemispheres 334.9
2449 Male, age 74, both hemispheres 320.6
1959 Male, age 76, both hemispheres 317.6
2456 Female, age 91, both hemispheres 295.9
2161 Male, age 80, both hemispheres 281.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 367.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 296.9
FF:10182-103D2 60 years, female 328.6
FF:10165-103B3 76 years, female 265.3
Medulla oblongata
Scaled Tags Per Million: 282.9
FF:10038-101F2 18-64 years, mixed 342.6
FF:10174-103C3 60 years, female 270.1
FF:10155-103A2 76 years, female 236.0
Pons
Scaled Tags Per Million: 367.6
FF:10033-101E6 18-54 years, mixed 367.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 206.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 164.7
Samples: 4

Max nTPM: 177.3
Min nTPM: 155.8
Sample A Female 167.7
Sample B Female 158.0
Sample C Male 177.3
Sample D Male 155.8
Pons
nTPM: 206.9
Samples: 4

Max nTPM: 265.8
Min nTPM: 176.1
Sample A Female 265.8
Sample B Female 176.1
Sample C Male 198.7
Sample D Male 187.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 263.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 263.6
Samples: 4

Max nTPM: 270.4
Min nTPM: 255.2
Sample A Male 255.2
Sample B Male 267.9
Sample C Female 270.4
Sample D Female 260.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 6.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 5.7
61413 Antisense, RP_040407_01_C10, Mouse strain C57BL/6J (56 days, male) 10.1
70786827 Antisense, RP_050706_03_D02, Mouse strain C57BL/6J (56 days, male) 4.8
68203457 Antisense, RP_041208_01_A04, Mouse strain C57BL/6J (56 days, male) 2.3
Pons
Expression energy: 6.6
61413 Antisense, RP_040407_01_C10, Mouse strain C57BL/6J (56 days, male) 13.3
70786827 Antisense, RP_050706_03_D02, Mouse strain C57BL/6J (56 days, male) 4.3
68203457 Antisense, RP_041208_01_A04, Mouse strain C57BL/6J (56 days, male) 2.2

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