We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ZCWPW1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • ZCWPW1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ZCWPW1
Synonyms DKFZp434N0510, FLJ10057, ZCW1
Gene descriptioni

Full gene name according to HGNC.

Zinc finger CW-type and PWWP domain containing 1
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 7
Cytoband q22.1
Chromosome location (bp) 100400826 - 100428992
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000078487 (version 109)
Entrez gene 55063
HGNC HGNC:23486
UniProt Q9H0M4 (UniProt - Evidence at protein level)
neXtProt NX_Q9H0M4
GeneCards ZCWPW1
Antibodypedia ZCWPW1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Dual histone methylation reader specific for PRDM9-catalyzed histone marks (H3K4me3 and H3K36me3) 1, 2. Facilitates the repair of PRDM9-induced meiotic double-strand breaks (DSBs) (By similarity). Essential for male fertility and spermatogenesis (By similarity). Required for meiosis prophase I progression in male but not in female germ cells (By similarity).... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Differentiation, Spermatogenesis
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables methyl-CpG binding activity and methylated histone binding activity. Predicted to be involved in meiosis I; positive regulation of DNA metabolic process; and spermatogenesis. Predicted to act upstream of or within homologous chromosome pairing at meiosis. Predicted to be located in XY body. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ZCWPW1-201
ENSP00000354210
ENST00000360951
Q9H0M4
[Direct mapping] Zinc finger CW-type PWWP domain protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005634 [nucleus]
GO:0005694 [chromosome]
GO:0007127 [meiosis I]
GO:0007129 [homologous chromosome pairing at meiosis]
GO:0007283 [spermatogenesis]
GO:0008270 [zinc ion binding]
GO:0008327 [methyl-CpG binding]
GO:0030154 [cell differentiation]
GO:0035064 [methylated histone binding]
GO:0045911 [positive regulation of DNA recombination]
GO:0046872 [metal ion binding]
GO:2000781 [positive regulation of double-strand break repair]
Show all
524 aa
59.3 kDa
No 0
ZCWPW1-202
ENSP00000381109
ENST00000398027
Q9H0M4
[Direct mapping] Zinc finger CW-type PWWP domain protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005694 [chromosome]
GO:0007127 [meiosis I]
GO:0007129 [homologous chromosome pairing at meiosis]
GO:0007283 [spermatogenesis]
GO:0008270 [zinc ion binding]
GO:0008327 [methyl-CpG binding]
GO:0030154 [cell differentiation]
GO:0035064 [methylated histone binding]
GO:0045911 [positive regulation of DNA recombination]
GO:0046872 [metal ion binding]
GO:2000781 [positive regulation of double-strand break repair]
Show all
648 aa
72 kDa
No 0
ZCWPW1-204
ENSP00000418351
ENST00000471336
H7C4V9
[Direct mapping] Zinc finger CW-type PWWP domain protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0008270 [zinc ion binding]
GO:0046872 [metal ion binding]
Show all
246 aa
28.5 kDa
No 0
ZCWPW1-205
ENSP00000419447
ENST00000472716
C9JUV7
[Direct mapping] Zinc finger CW-type PWWP domain protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
38 aa
4.7 kDa
No 0
ZCWPW1-208
ENSP00000419187
ENST00000490721
Q9H0M4
[Direct mapping] Zinc finger CW-type PWWP domain protein 1
Show all
A0A0S2Z5N7
[Target identity:100%; Query identity:100%] Zinc finger CW type with PWWP domain 1 isoform 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005694 [chromosome]
GO:0007127 [meiosis I]
GO:0007129 [homologous chromosome pairing at meiosis]
GO:0007283 [spermatogenesis]
GO:0008270 [zinc ion binding]
GO:0008327 [methyl-CpG binding]
GO:0030154 [cell differentiation]
GO:0035064 [methylated histone binding]
GO:0045911 [positive regulation of DNA recombination]
GO:0046872 [metal ion binding]
GO:2000781 [positive regulation of double-strand break repair]
Show all
477 aa
53.3 kDa
No 0
ZCWPW1-209
ENSP00000507762
ENST00000684423
A0A804HK41
[Direct mapping] Zinc finger CW-type PWWP domain protein 1; Zinc finger, CW type with PWWP domain 1, isoform CRA_a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0001741 [XY body]
GO:0005634 [nucleus]
GO:0006325 [chromatin organization]
GO:0007127 [meiosis I]
GO:0007129 [homologous chromosome pairing at meiosis]
GO:0007283 [spermatogenesis]
GO:0008270 [zinc ion binding]
GO:0035064 [methylated histone binding]
GO:0045911 [positive regulation of DNA recombination]
GO:0046872 [metal ion binding]
GO:0140566 [histone reader activity]
GO:2000781 [positive regulation of double-strand break repair]
Show all
649 aa
72.1 kDa
No 0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org