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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:54.0 nTPM
HPA Brain:182.6 nTPM
GTEx:54.0 nTPM
FANTOM5:59.0 Scaled Tags Per Million
Pig:63.0 nTPM
Mouse:134.3 nTPM
Allen mouse:9.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA049877
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

182.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 127.7
2481 Female, age 94, left hemisphere 173.5
2290 Female, age 72, unknown 146.9
2289 Male, age 61, right hemisphere 137.2
1857 Female, age 85, left hemisphere 135.5
2288 Male, age 75, left hemisphere 124.7
1854 Male, age 80, left hemisphere 123.7
1781 Male, age 74, unknown 109.9
2846 Female, age 79, unknown 69.8
Globus pallidus, externus
nTPM: 155.5
2646 Male, age 61, right hemisphere 223.3
2567 Female, age 72, unknown 159.7
1996 Male, age 80, right hemisphere 151.2
2772 Female, age 79, unknown 128.2
2395 Male, age 75, both hemispheres 115.3
Globus pallidus, internus
nTPM: 148.1
2483 Female, age 94, right hemisphere 229.1
1818 Male, age 74, unknown 190.3
2566 Female, age 72, unknown 154.5
2037 Male, age 80, right hemisphere 147.3
2287 Male, age 75, right hemisphere 134.8
2778 Female, age 91, both hemispheres 96.9
2111 Female, age 85, right hemisphere 83.6
Nucleus accumbens
nTPM: 123.0
2732 Male, age 80, right hemisphere 148.8
2286 Male, age 75, left hemisphere 140.6
1806 Female, age 85, left hemisphere 128.0
2698 Female, age 72, unknown 123.8
1856 Female, age 91, right hemisphere 115.6
1783 Male, age 74, unknown 112.8
2824 Male, age 61, right hemisphere 111.5
2391 Female, age 94, left hemisphere 102.6
Nucleus basalis of Meynert
nTPM: 127.2
2569 Male, age 61, both hemispheres 271.2
2484 Female, age 94, left hemisphere 93.2
2393 Male, age 80, right hemisphere 76.1
2821 Male, age 75, both hemispheres 68.3
Nucleus of the diagonal band
nTPM: 176.0
1979 Male, age 74, unknown 247.3
1812 Female, age 91, both hemispheres 172.4
2775 Male, age 80, right hemisphere 165.0
2195 Female, age 85, both hemispheres 162.6
2029 Male, age 61, right hemisphere 132.4
Putamen
nTPM: 92.1
2647 Male, age 75, left hemisphere 122.9
2482 Female, age 94, left hemisphere 112.1
1937 Female, age 91, right hemisphere 101.5
1838 Male, age 80, right hemisphere 89.6
1829 Male, age 74, unknown 88.3
2489 Female, age 72, unknown 69.4
2466 Female, age 79, unknown 60.9
Septal nuclei
nTPM: 182.6
2059 Female, age 85, both hemispheres 232.5
2199 Male, age 80, right hemisphere 210.8
2394 Male, age 61, left hemisphere 208.4
2009 Female, age 91, both hemispheres 171.1
1960 Male, age 74, unknown 169.8
2031 Female, age 72, unknown 145.5
2629 Female, age 94, right hemisphere 139.8
Stria terminalis, bed nucleus
nTPM: 178.1
2201 Male, age 74, unknown 223.5
1974 Female, age 91, both hemispheres 167.5
2486 Female, age 94, both hemispheres 143.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 53.3
Samples: 246

Max nTPM: 135.2
Min nTPM: 7.8
Std nTPM: 21.3
Median nTPM: 51.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 135.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 118.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 112.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 111.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 109.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 107.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 107.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 103.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 102.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 101.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 99.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 96.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 92.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 91.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 90.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 89.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 88.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 88.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 87.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 86.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 85.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 84.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 84.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 83.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 83.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 80.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 78.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 77.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 77.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 76.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 76.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 74.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 74.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 73.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 71.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 71.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 71.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 70.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 70.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 70.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 69.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 69.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 68.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 67.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 67.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 67.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 67.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 67.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 67.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 66.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 66.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 66.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 66.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 65.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 65.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 65.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 65.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 65.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 64.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 64.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 64.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 64.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 63.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 63.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 63.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 62.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 62.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 62.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 62.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 62.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 62.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 62.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 62.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 62.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 62.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 62.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 61.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 61.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 61.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 61.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 61.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 61.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 61.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 60.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 60.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 60.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 59.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 59.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 59.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 58.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 58.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 58.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 58.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 57.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 57.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 56.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 56.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 56.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 56.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 56.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 55.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 55.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 55.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 55.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 55.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 55.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 55.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 55.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 55.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 55.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 54.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 54.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 54.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 54.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 54.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 54.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 54.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 53.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 52.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 52.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 51.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 51.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 51.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 51.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 51.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 51.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 51.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 50.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 50.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 50.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 50.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 49.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 49.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 48.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 48.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 48.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 48.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 48.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 48.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 48.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 47.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 47.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 47.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 47.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 47.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 46.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 46.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 46.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 46.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 46.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 45.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 45.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 45.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 45.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 45.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 44.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 44.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 44.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 44.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 44.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 44.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 44.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 44.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 43.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 43.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 43.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 42.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 42.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 42.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 42.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 41.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 41.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 41.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 41.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 41.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 41.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 40.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 40.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 40.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 40.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 40.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 39.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 39.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 39.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 39.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 39.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 39.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 39.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 38.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 38.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 38.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 37.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 37.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 37.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 36.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 36.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 36.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 35.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 35.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 35.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 35.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 35.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 34.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 34.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 34.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 34.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 33.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 33.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 33.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 33.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 33.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 32.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 31.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 31.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 31.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 31.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 31.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 30.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 30.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 29.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 29.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 28.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 27.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 27.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 27.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 27.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 26.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 26.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 24.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 24.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 24.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 23.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 22.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 20.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 20.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 19.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 17.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 17.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 17.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 16.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 16.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 14.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 11.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 9.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 8.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 7.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 54.0
Samples: 246

Max nTPM: 136.0
Min nTPM: 13.6
Std nTPM: 24.2
Median nTPM: 49.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 136.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 132.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 124.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 121.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 120.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 119.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 118.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 118.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 113.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 113.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 112.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 109.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 109.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 107.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 105.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 104.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 100.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 100.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 99.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 99.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 99.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 99.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 98.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 95.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 94.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 93.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 91.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 86.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 85.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 85.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 82.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 82.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 82.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 80.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 78.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 77.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 76.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 75.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 72.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 70.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 70.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 70.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 70.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 69.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 69.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 69.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 69.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 69.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 69.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 68.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 67.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 67.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 67.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 66.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 66.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 65.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 65.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 64.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 64.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 63.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 63.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 62.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 62.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 62.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 62.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 62.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 62.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 61.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 61.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 61.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 61.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 61.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 60.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 60.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 58.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 58.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 57.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 57.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 56.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 56.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 56.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 55.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 55.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 55.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 54.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 54.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 54.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 54.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 54.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 54.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 53.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 53.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 53.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 53.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 53.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 53.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 53.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 53.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 52.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 52.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 52.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 52.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 52.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 52.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 52.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 52.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 51.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 51.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 51.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 51.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 51.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 51.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 50.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 50.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 50.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 50.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 50.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 50.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 50.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 49.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 49.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 49.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 49.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 49.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 49.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 48.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 48.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 48.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 48.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 48.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 47.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 47.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 47.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 47.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 47.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 46.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 45.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 45.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 45.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 45.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 45.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 45.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 45.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 45.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 44.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 44.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 44.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 44.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 44.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 44.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 43.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 43.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 43.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 43.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 43.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 42.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 42.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 42.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 41.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 41.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 41.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 41.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 41.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 41.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 41.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 40.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 40.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 40.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 39.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 39.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 39.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 39.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 39.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 39.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 38.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 38.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 38.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 38.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 38.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 38.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 38.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 38.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 38.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 38.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 37.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 37.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 37.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 37.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 37.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 37.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 37.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 37.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 37.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 37.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 35.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 35.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 35.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 34.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 34.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 34.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 34.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 34.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 33.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 33.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 33.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 33.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 32.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 32.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 32.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 32.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 31.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 30.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 30.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 29.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 29.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 29.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 29.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 29.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 29.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 28.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 28.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 28.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 28.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 28.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 28.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 28.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 27.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 27.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 27.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 27.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 25.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 25.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 24.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 24.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 24.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 23.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 23.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 23.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 22.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 22.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 21.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 19.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 19.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 19.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 18.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 13.6
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Brain - Putamen (basal ganglia)
Average nTPM: 35.2
Samples: 205

Max nTPM: 89.6
Min nTPM: 4.2
Std nTPM: 15.5
Median nTPM: 33.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 89.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 86.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 82.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 82.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 80.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 79.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 76.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 74.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 73.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 67.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 64.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 62.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 58.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 58.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 56.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 56.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 53.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 52.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 52.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 52.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 51.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 50.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 50.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 49.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 49.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 49.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 48.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 48.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 48.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 48.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 47.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 47.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 47.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 46.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 46.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 46.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 45.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 45.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 45.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 45.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 44.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 44.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 44.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 44.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 43.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 43.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 43.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 43.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 43.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 43.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 42.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 42.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 42.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 42.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 41.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 41.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 41.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 41.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 41.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 41.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 41.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 41.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 41.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 41.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 40.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 40.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 40.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 40.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 40.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 40.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 40.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 40.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 40.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 39.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 39.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 39.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 39.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 38.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 38.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 38.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 38.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 38.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 38.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 38.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 38.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 37.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 36.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 36.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 36.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 36.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 36.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 36.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 35.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 35.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 35.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 35.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 35.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 35.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 34.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 34.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 34.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 34.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 33.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 33.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 32.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 32.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 32.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 32.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 32.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 32.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 31.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 31.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 31.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 31.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 31.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 31.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 31.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 31.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 30.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 30.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 30.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 30.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 30.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 30.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 30.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 30.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 29.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 29.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 29.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 29.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 29.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 29.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 28.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 28.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 28.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 28.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 28.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 27.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 27.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 27.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 27.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 27.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 27.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 26.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 26.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 26.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 26.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 26.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 26.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 26.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 26.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 26.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 25.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 25.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 25.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 25.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 25.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 24.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 24.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 24.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 24.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 24.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 23.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 23.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 23.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 23.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 23.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 23.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 23.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 23.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 22.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 22.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 22.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 21.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 21.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 21.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 20.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 20.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 20.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 19.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 18.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 18.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 18.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 18.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 17.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 17.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 16.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 16.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 15.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 15.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 12.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 11.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 11.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 11.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 10.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 10.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 8.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 7.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 7.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 7.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 6.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 6.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 5.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 4.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 4.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

59.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 59.0
FF:10164-103B2 76 years, female 59.0
Nucleus accumbens
Scaled Tags Per Million: 52.7
FF:10037-101F1 23-56 years, mixed 52.7
Putamen
Scaled Tags Per Million: 47.3
FF:10176-103C5 60 years, female 47.3
Globus pallidus
Scaled Tags Per Million: 40.7
FF:10175-103C4 60 years, female 43.1
FF:10161-103A8 76 years, female 38.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.0
Pig sample Sample description nTPM
Caudate
nTPM: 53.4
Samples: 4

Max nTPM: 60.3
Min nTPM: 45.8
Sample A Female 48.4
Sample B Female 59.2
Sample C Male 60.3
Sample D Male 45.8
Putamen
nTPM: 38.5
Samples: 4

Max nTPM: 46.1
Min nTPM: 31.8
Sample A Female 46.1
Sample B Female 31.8
Sample C Male 36.5
Sample D Male 39.6
Septum
nTPM: 63.0
Samples: 4

Max nTPM: 87.0
Min nTPM: 48.2
Sample A Female 48.2
Sample B Female 52.6
Sample C Male 87.0
Sample D Male 64.2
Ventral pallidum
nTPM: 55.0
Samples: 4

Max nTPM: 88.1
Min nTPM: 35.5
Sample A Female 35.5
Sample B Female 55.1
Sample C Male 88.1
Sample D Male 41.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

134.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 71.6
Samples: 4

Max nTPM: 78.9
Min nTPM: 68.8
Sample A Male 69.0
Sample B Male 68.8
Sample C Female 69.6
Sample D Female 78.9
Septum
nTPM: 134.3
Samples: 4

Max nTPM: 146.4
Min nTPM: 125.0
Sample A Male 126.1
Sample B Male 146.4
Sample C Female 125.0
Sample D Female 139.8
Ventral forebrain
nTPM: 80.7
Samples: 4

Max nTPM: 91.6
Min nTPM: 73.1
Sample A Male 73.1
Sample B Male 91.6
Sample C Female 78.6
Sample D Female 79.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 7.6
69236777 Antisense, RP_050331_01_B04, Mouse strain C57BL/6J (56 days, male) 9.9
74988667 Antisense, RP_060315_04_A03, Mouse strain C57BL/6J (56 days, male) 5.4
Pallidum
Expression energy: 9.3
69236777 Antisense, RP_050331_01_B04, Mouse strain C57BL/6J (56 days, male) 11.2
74988667 Antisense, RP_060315_04_A03, Mouse strain C57BL/6J (56 days, male) 7.5

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