PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:224.4 nTPM
FANTOM5:73.5 Scaled Tags Per Million
Pig:78.3 nTPM
Mouse:64.5 nTPM
Allen mouse:9.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 224.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 113.8
2301 Female, age 85, both hemispheres 134.4
1984 Male, age 76, both hemispheres 124.7
2090 Male, age 80, both hemispheres 117.1
2188 Female, age 91, both hemispheres 78.8
Area postrema
nTPM: 224.4
2799 Male, age 61, both hemispheres 296.7
2054 Male, age 76, both hemispheres 229.0
2306 Male, age 80, both hemispheres 147.6
Dorsal cochlear nucleus
nTPM: 166.0
2802 Male, age 74, right hemisphere 197.3
2370 Male, age 61, both hemispheres 183.8
2058 Male, age 76, both hemispheres 173.2
2378 Male, age 80, both hemispheres 165.1
2187 Female, age 91, both hemispheres 110.4
Dorsal medullary reticular nucleus
nTPM: 144.6
2088 Male, age 76, both hemispheres 156.0
2373 Male, age 61, both hemispheres 154.7
2040 Female, age 85, both hemispheres 123.2
Dorsal motor vagal complex
nTPM: 223.5
2797 Male, age 61, both hemispheres 368.5
2844 Male, age 55, unknown 264.3
2643 Male, age 74, both hemispheres 236.8
2813 Female, age 72, unknown 233.4
2185 Male, age 76, both hemispheres 194.5
2133 Female, age 91, both hemispheres 179.1
2000 Male, age 74, unknown 159.5
2807 Female, age 85, both hemispheres 151.7
Dorsal tegmental nucleus
nTPM: 141.7
1936 Male, age 76, left hemisphere 159.2
2326 Male, age 74, both hemispheres 143.1
2083 Male, age 80, both hemispheres 140.3
2358 Male, age 61, both hemispheres 124.2
Dorsolateral tegmental area
nTPM: 125.6
2141 Male, age 76, both hemispheres 180.0
2360 Male, age 74, both hemispheres 138.3
2654 Male, age 80, both hemispheres 135.4
2751 Female, age 85, both hemispheres 113.3
2337 Male, age 61, both hemispheres 60.8
Gigantocellular reticular nuclei, medullary
nTPM: 151.5
2462 Male, age 74, both hemispheres 199.2
2310 Male, age 80, both hemispheres 172.0
2387 Female, age 91, both hemispheres 152.0
2314 Male, age 61, both hemispheres 137.9
2022 Male, age 76, right hemisphere 125.2
1876 Female, age 85, both hemispheres 122.5
Gigantocellular reticular nuclei, pars
nTPM: 174.1
2168 Male, age 76, both hemispheres 246.6
2706 Male, age 80, both hemispheres 184.5
2330 Male, age 80, both hemispheres 177.9
2084 Female, age 85, both hemispheres 136.6
2336 Male, age 61, both hemispheres 124.9
Inferior olive
nTPM: 194.3
2379 Male, age 80, both hemispheres 225.4
2085 Female, age 85, both hemispheres 200.1
2563 Male, age 74, both hemispheres 189.7
2628 Female, age 91, both hemispheres 187.6
2178 Male, age 61, both hemispheres 168.8
Kolliker-Fuse nucleus
nTPM: 140.0
2315 Male, age 76, right hemisphere 183.9
2163 Male, age 80, both hemispheres 131.8
2793 Female, age 91, left hemisphere 104.2
Lateral lemniscal nuclei
nTPM: 179.8
2036 Male, age 80, both hemispheres 237.5
2169 Male, age 76, both hemispheres 207.3
2746 Female, age 85, left hemisphere 192.0
2453 Male, age 74, right hemisphere 155.5
2320 Female, age 91, left hemisphere 106.7
Lateral medullary reticular nucleus
nTPM: 145.0
2804 Female, age 91, both hemispheres 229.2
2374 Male, age 61, both hemispheres 163.9
2044 Male, age 76, both hemispheres 150.8
2190 Female, age 85, both hemispheres 146.6
2852 Male, age 80, both hemispheres 106.3
2305 Male, age 74, both hemispheres 73.3
Lateral parabrachial nucleus
nTPM: 162.5
2139 Female, age 85, right hemisphere 251.3
2013 Male, age 80, both hemispheres 159.6
2790 Male, age 61, both hemispheres 123.4
2792 Male, age 76, both hemispheres 115.7
Lateral vestibular nucleus
nTPM: 147.9
2184 Male, age 76, both hemispheres 156.8
2311 Male, age 80, both hemispheres 139.1
Locus coeruleus
nTPM: 210.7
2317 Female, age 72, unknown 239.9
2014 Male, age 55, unknown 233.3
2123 Female, age 91, both hemispheres 218.5
1980 Male, age 76, both hemispheres 214.0
2162 Male, age 80, both hemispheres 197.5
2788 Male, age 74, unknown 194.8
2720 Male, age 74, both hemispheres 176.8
Medial olivary nucleus
nTPM: 125.8
2138 Female, age 91, both hemispheres 195.6
2851 Male, age 80, both hemispheres 133.6
1962 Male, age 76, both hemispheres 101.4
1943 Male, age 61, both hemispheres 72.5
Medial parabrachial nucleus
nTPM: 123.9
2854 Male, age 80, both hemispheres 137.3
2786 Male, age 76, both hemispheres 137.0
2156 Male, age 61, both hemispheres 127.6
2463 Female, age 85, right hemisphere 120.3
2170 Female, age 91, both hemispheres 97.1
Medial periolivary nuclei
nTPM: 183.2
2171 Female, age 85, both hemispheres 251.2
2063 Male, age 76, both hemispheres 243.6
2791 Male, age 74, right hemisphere 170.9
2081 Male, age 80, both hemispheres 133.5
2458 Female, age 91, both hemispheres 116.5
Medial vestibular nucleus
nTPM: 154.5
2624 Male, age 61, both hemispheres 170.5
2134 Male, age 76, both hemispheres 170.4
2743 Female, age 85, both hemispheres 168.5
2093 Male, age 80, both hemispheres 143.6
2801 Male, age 74, both hemispheres 143.3
2803 Female, age 91, both hemispheres 130.6
Motor facial nucleus
nTPM: 188.5
2062 Male, age 76, both hemispheres 264.0
2327 Male, age 80, both hemispheres 222.3
2795 Female, age 91, both hemispheres 214.3
2365 Male, age 74, right hemisphere 156.9
2697 Female, age 85, both hemispheres 154.0
2126 Male, age 61, both hemispheres 119.4
Motor hypoglossal nucleus
nTPM: 140.1
2277 Male, age 76, both hemispheres 216.2
2461 Male, age 61, both hemispheres 146.6
2125 Female, age 91, both hemispheres 134.0
2132 Female, age 85, both hemispheres 106.1
2182 Male, age 80, both hemispheres 97.6
Motor trigeminal nucleus
nTPM: 143.3
2079 Male, age 80, both hemispheres 205.7
2309 Male, age 76, both hemispheres 150.7
2560 Male, age 74, both hemispheres 134.0
2335 Male, age 61, both hemispheres 121.6
2321 Female, age 91, both hemispheres 104.5
Nuclei of the trapezoid body
nTPM: 201.5
2735 Female, age 85, both hemispheres 281.9
1983 Male, age 76, both hemispheres 229.6
2166 Male, age 80, both hemispheres 179.9
2368 Female, age 91, both hemispheres 169.6
2159 Male, age 61, both hemispheres 146.6
Nucleus ambiguus
nTPM: 152.9
2071 Male, age 76, both hemispheres 163.5
2096 Female, age 85, both hemispheres 142.3
Nucleus cuneatus
nTPM: 169.5
2805 Female, age 91, both hemispheres 241.2
2562 Male, age 61, both hemispheres 234.0
2564 Male, age 74, both hemispheres 216.1
2100 Male, age 76, both hemispheres 175.1
2131 Male, age 76, both hemispheres 151.6
2376 Male, age 61, both hemispheres 141.2
2380 Male, age 80, both hemispheres 128.7
2381 Male, age 80, both hemispheres 121.1
2808 Female, age 85, both hemispheres 116.4
Nucleus gracilis
nTPM: 145.0
2627 Male, age 74, both hemispheres 175.2
2299 Female, age 85, both hemispheres 156.9
2382 Male, age 80, both hemispheres 103.1
Nucleus raphe magnus
nTPM: 183.8
2172 Female, age 85, both hemispheres 260.4
2328 Male, age 80, both hemispheres 191.2
2051 Male, age 76, both hemispheres 186.1
2160 Male, age 61, both hemispheres 182.0
2455 Male, age 74, both hemispheres 168.7
2459 Female, age 91, both hemispheres 114.6
Nucleus raphe obscurus
nTPM: 116.9
2800 Male, age 61, midline 128.9
2845 Female, age 85, midline 120.5
2142 Male, age 76, midline 101.3
Nucleus raphe pallidus
nTPM: 89.4
2183 Male, age 80, midline 101.5
1924 Male, age 61, midline 83.7
2145 Male, age 76, midline 83.0
Nucleus tractus solitarii
nTPM: 182.0
2656 Male, age 76, both hemispheres 218.5
2144 Female, age 91, right hemisphere 184.8
2191 Female, age 85, both hemispheres 162.5
2307 Male, age 80, both hemispheres 162.1
Paramedian reticular nucleus
nTPM: 122.1
2050 Female, age 85, both hemispheres 153.9
2057 Male, age 80, both hemispheres 119.1
2313 Male, age 61, both hemispheres 117.2
2052 Male, age 76, both hemispheres 98.3
Parvicellular reticular nuclei
nTPM: 137.9
2558 Male, age 74, both hemispheres 168.0
2095 Male, age 76, both hemispheres 135.6
2119 Male, age 80, both hemispheres 109.9
Parvicellular reticular nuclei, medullary
nTPM: 153.0
2181 Male, age 80, left hemisphere 176.0
2091 Female, age 85, both hemispheres 151.9
2189 Female, age 91, both hemispheres 131.0
Pedunculopontine tegmental nucleus
nTPM: 138.4
1921 Female, age 85, both hemispheres 163.8
2334 Male, age 80, both hemispheres 161.7
2338 Male, age 61, both hemispheres 89.8
Peritrigeminal nucleus
nTPM: 142.5
2067 Female, age 85, both hemispheres 152.7
2136 Male, age 76, both hemispheres 144.7
2179 Male, age 61, both hemispheres 130.1
Pontine nuclei
nTPM: 140.6
2787 Female, age 85, both hemispheres 243.6
1968 Male, age 76, left hemisphere 185.7
1863 Male, age 55, unknown 168.7
2115 Male, age 80, left hemisphere 147.7
2109 Female, age 72, unknown 115.9
2727 Male, age 61, right hemisphere 115.9
2319 Female, age 91, both hemispheres 86.7
2454 Male, age 74, left hemisphere 60.8
Pontine raphe nucleus
nTPM: 177.3
2122 Female, age 85, midline 180.6
2853 Male, age 76, midline 174.1
Posteroventral cochlear nucleus
nTPM: 111.0
2371 Male, age 61, both hemispheres 174.8
2752 Female, age 85, both hemispheres 139.7
2070 Male, age 76, both hemispheres 134.9
2341 Male, age 80, both hemispheres 63.3
2135 Female, age 91, both hemispheres 42.3
Prepositus hypoglossal nucleus
nTPM: 170.2
2086 Male, age 80, both hemispheres 188.7
2855 Female, age 85, right hemisphere 151.7
Principal sensory trigeminal nucleus
nTPM: 158.8
2008 Male, age 80, left hemisphere 211.4
2158 Male, age 61, both hemispheres 167.6
2324 Male, age 76, both hemispheres 158.2
2367 Female, age 91, left hemisphere 98.2
Reticular pontine nucleus, caudal
nTPM: 143.9
2092 Male, age 76, both hemispheres 193.8
2332 Male, age 80, right hemisphere 191.3
2457 Female, age 91, both hemispheres 109.2
2559 Male, age 74, both hemispheres 81.3
Reticular pontine nucleus, oral
nTPM: 123.8
2012 Female, age 85, both hemispheres 169.6
2167 Male, age 76, both hemispheres 143.5
1939 Male, age 80, both hemispheres 126.7
2366 Female, age 91, both hemispheres 89.9
2361 Male, age 74, both hemispheres 89.5
Reticulotegmental nucleus
nTPM: 145.4
2325 Male, age 76, both hemispheres 200.2
2333 Male, age 80, both hemispheres 139.3
2322 Female, age 91, both hemispheres 122.8
2452 Male, age 74, both hemispheres 119.2
Spinal trigeminal nucleus, caudal
nTPM: 142.4
2642 Male, age 74, both hemispheres 156.7
2447 Male, age 76, both hemispheres 150.8
2390 Female, age 91, both hemispheres 149.2
2312 Male, age 61, both hemispheres 128.0
2308 Male, age 80, both hemispheres 127.4
Spinal trigeminal nucleus, interpolar
nTPM: 153.9
2066 Male, age 76, right hemisphere 175.2
2625 Male, age 61, both hemispheres 171.8
2389 Female, age 91, both hemispheres 161.9
2386 Female, age 85, both hemispheres 137.9
2033 Male, age 80, both hemispheres 122.9
Spinal trigeminal nucleus, oral
nTPM: 119.0
1978 Male, age 76, both hemispheres 121.7
2737 Female, age 85, both hemispheres 119.8
2164 Male, age 80, both hemispheres 115.5
Spinal vestibular nucleus
nTPM: 132.3
2384 Male, age 74, both hemispheres 141.7
2806 Female, age 85, both hemispheres 141.1
2796 Male, age 61, both hemispheres 135.5
2186 Female, age 91, both hemispheres 132.8
2780 Male, age 80, both hemispheres 124.0
2748 Male, age 76, both hemispheres 118.7
Subcoeruleus area
nTPM: 162.9
2089 Male, age 76, left hemisphere 208.3
2451 Male, age 74, both hemispheres 176.3
1958 Male, age 80, both hemispheres 165.7
2323 Female, age 91, left hemisphere 157.9
2369 Female, age 85, left hemisphere 106.3
Superior olive
nTPM: 169.7
1875 Female, age 85, both hemispheres 210.3
2329 Male, age 80, right hemisphere 179.8
2020 Male, age 76, both hemispheres 177.9
2364 Male, age 74, right hemisphere 143.0
2561 Female, age 91, both hemispheres 137.6
Superior vestibular nucleus
nTPM: 159.7
2061 Male, age 76, both hemispheres 176.7
2015 Male, age 80, both hemispheres 153.3
2383 Male, age 74, both hemispheres 149.2
Ventral medullary reticular nucleus
nTPM: 168.8
2372 Male, age 61, both hemispheres 203.0
2060 Male, age 76, both hemispheres 134.5
Ventral periolivary nuclei
nTPM: 206.3
2130 Female, age 85, both hemispheres 283.7
2165 Male, age 80, both hemispheres 230.1
2023 Male, age 76, both hemispheres 164.9
2794 Female, age 91, left hemisphere 146.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 145.4
2302 Female, age 91, both hemispheres 199.8
2180 Male, age 61, both hemispheres 142.8
1986 Male, age 76, both hemispheres 135.3
2741 Female, age 85, both hemispheres 129.2
2118 Male, age 80, both hemispheres 119.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 160.4
1959 Male, age 76, both hemispheres 197.3
2161 Male, age 80, both hemispheres 188.7
2449 Male, age 74, both hemispheres 158.6
2456 Female, age 91, both hemispheres 144.7
2359 Male, age 61, both hemispheres 139.6
2840 Female, age 85, both hemispheres 133.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 73.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 61.7
FF:10182-103D2 60 years, female 72.1
FF:10165-103B3 76 years, female 51.3
Medulla oblongata
Scaled Tags Per Million: 45.2
FF:10038-101F2 18-64 years, mixed 64.7
FF:10155-103A2 76 years, female 38.5
FF:10174-103C3 60 years, female 32.3
Pons
Scaled Tags Per Million: 73.5
FF:10033-101E6 18-54 years, mixed 73.5

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 78.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 78.3
Samples: 4

Max nTPM: 83.9
Min nTPM: 73.1
Sample A Female 73.9
Sample B Female 82.3
Sample C Male 83.9
Sample D Male 73.1
Pons
nTPM: 74.1
Samples: 4

Max nTPM: 83.3
Min nTPM: 70.8
Sample A Female 71.1
Sample B Female 83.3
Sample C Male 71.2
Sample D Male 70.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 64.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 64.5
Samples: 4

Max nTPM: 67.2
Min nTPM: 61.7
Sample A Male 65.2
Sample B Male 67.2
Sample C Female 61.7
Sample D Female 63.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 9.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 9.2
69236777 Antisense, RP_050331_01_B04, Mouse strain C57BL/6J (56 days, male) 12.0
74988667 Antisense, RP_060315_04_A03, Mouse strain C57BL/6J (56 days, male) 6.5
Pons
Expression energy: 8.6
69236777 Antisense, RP_050331_01_B04, Mouse strain C57BL/6J (56 days, male) 11.0
74988667 Antisense, RP_060315_04_A03, Mouse strain C57BL/6J (56 days, male) 6.1

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