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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
706.9
nTPM
FANTOM5:
784.0
Scaled Tags Per Million
Pig:
185.4
nTPM
Allen mouse:
0.5
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
706.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 667.7
2188
Female, age 91, both hemispheres
891.0
2301
Female, age 85, both hemispheres
859.2
2090
Male, age 80, both hemispheres
592.9
1984
Male, age 76, both hemispheres
327.9
Dorsal cochlear nucleus nTPM: 576.0
2802
Male, age 74, right hemisphere
641.5
2378
Male, age 80, both hemispheres
609.3
2370
Male, age 61, both hemispheres
596.9
2187
Female, age 91, both hemispheres
572.2
2058
Male, age 76, both hemispheres
459.7
Dorsal tegmental nucleus nTPM: 600.6
2358
Male, age 61, both hemispheres
750.7
2083
Male, age 80, both hemispheres
649.3
2326
Male, age 74, both hemispheres
582.4
1936
Male, age 76, left hemisphere
420.2
Dorsolateral tegmental area nTPM: 576.4
2337
Male, age 61, both hemispheres
1085.7
2654
Male, age 80, both hemispheres
664.1
2751
Female, age 85, both hemispheres
528.3
2360
Male, age 74, both hemispheres
331.1
2141
Male, age 76, both hemispheres
273.0
Kolliker-Fuse nucleus nTPM: 576.5
2793
Female, age 91, left hemisphere
839.8
2163
Male, age 80, both hemispheres
549.5
2315
Male, age 76, right hemisphere
340.0
Lateral lemniscal nuclei nTPM: 445.0
2320
Female, age 91, left hemisphere
600.6
2036
Male, age 80, both hemispheres
513.4
2453
Male, age 74, right hemisphere
426.2
2169
Male, age 76, both hemispheres
369.9
2746
Female, age 85, left hemisphere
315.1
Lateral parabrachial nucleus nTPM: 584.3
2790
Male, age 61, both hemispheres
914.7
2792
Male, age 76, both hemispheres
717.5
2013
Male, age 80, both hemispheres
410.4
2139
Female, age 85, right hemisphere
294.7
Lateral vestibular nucleus nTPM: 615.5
2311
Male, age 80, both hemispheres
730.1
2184
Male, age 76, both hemispheres
500.9
Locus coeruleus nTPM: 267.5
2720
Male, age 74, both hemispheres
470.1
2162
Male, age 80, both hemispheres
366.0
2317
Female, age 72, unknown
229.1
2123
Female, age 91, both hemispheres
220.1
1980
Male, age 76, both hemispheres
206.0
2788
Male, age 74, unknown
191.3
2014
Male, age 55, unknown
189.8
Medial parabrachial nucleus nTPM: 591.6
2156
Male, age 61, both hemispheres
838.3
2170
Female, age 91, both hemispheres
615.3
2854
Male, age 80, both hemispheres
516.3
2463
Female, age 85, right hemisphere
498.8
2786
Male, age 76, both hemispheres
489.5
Medial periolivary nuclei nTPM: 416.1
2458
Female, age 91, both hemispheres
625.2
2081
Male, age 80, both hemispheres
466.0
2171
Female, age 85, both hemispheres
353.6
2063
Male, age 76, both hemispheres
337.9
2791
Male, age 74, right hemisphere
297.5
Motor facial nucleus nTPM: 511.2
2697
Female, age 85, both hemispheres
772.1
2795
Female, age 91, both hemispheres
598.2
2327
Male, age 80, both hemispheres
533.8
2126
Male, age 61, both hemispheres
513.6
2365
Male, age 74, right hemisphere
361.0
2062
Male, age 76, both hemispheres
288.7
Motor trigeminal nucleus nTPM: 564.7
2321
Female, age 91, both hemispheres
694.7
2335
Male, age 61, both hemispheres
625.2
2309
Male, age 76, both hemispheres
536.6
2560
Male, age 74, both hemispheres
486.3
2079
Male, age 80, both hemispheres
480.6
Nuclei of the trapezoid body nTPM: 459.5
2166
Male, age 80, both hemispheres
641.8
2368
Female, age 91, both hemispheres
609.2
2159
Male, age 61, both hemispheres
439.5
1983
Male, age 76, both hemispheres
317.2
2735
Female, age 85, both hemispheres
289.6
Nucleus raphe magnus nTPM: 395.8
2328
Male, age 80, both hemispheres
566.8
2459
Female, age 91, both hemispheres
509.1
2051
Male, age 76, both hemispheres
406.7
2455
Male, age 74, both hemispheres
352.8
2172
Female, age 85, both hemispheres
299.3
2160
Male, age 61, both hemispheres
240.0
Paramedian reticular nucleus nTPM: 511.5
2052
Male, age 76, both hemispheres
636.4
2313
Male, age 61, both hemispheres
516.9
2057
Male, age 80, both hemispheres
506.4
2050
Female, age 85, both hemispheres
386.2
Pedunculopontine tegmental nucleus nTPM: 553.0
2338
Male, age 61, both hemispheres
792.8
2334
Male, age 80, both hemispheres
535.0
1921
Female, age 85, both hemispheres
331.3
Pontine nuclei nTPM: 435.6
2319
Female, age 91, both hemispheres
690.5
2115
Male, age 80, left hemisphere
562.1
2454
Male, age 74, left hemisphere
428.0
1863
Male, age 55, unknown
418.0
1968
Male, age 76, left hemisphere
398.3
2109
Female, age 72, unknown
395.1
2787
Female, age 85, both hemispheres
345.3
2727
Male, age 61, right hemisphere
247.8
Pontine raphe nucleus nTPM: 315.6
2122
Female, age 85, midline
343.2
2853
Male, age 76, midline
288.0
Posteroventral cochlear nucleus nTPM: 706.9
2135
Female, age 91, both hemispheres
969.6
2341
Male, age 80, both hemispheres
942.3
2371
Male, age 61, both hemispheres
726.1
2070
Male, age 76, both hemispheres
488.5
2752
Female, age 85, both hemispheres
408.0
Principal sensory trigeminal nucleus nTPM: 437.7
2367
Female, age 91, left hemisphere
561.7
2324
Male, age 76, both hemispheres
521.5
2158
Male, age 61, both hemispheres
341.0
2008
Male, age 80, left hemisphere
326.6
Reticular pontine nucleus, caudal nTPM: 528.3
2457
Female, age 91, both hemispheres
639.9
2559
Male, age 74, both hemispheres
515.1
2332
Male, age 80, right hemisphere
497.1
2092
Male, age 76, both hemispheres
460.9
Reticular pontine nucleus, oral nTPM: 496.3
2366
Female, age 91, both hemispheres
834.9
1939
Male, age 80, both hemispheres
495.7
2167
Male, age 76, both hemispheres
449.5
2012
Female, age 85, both hemispheres
358.4
2361
Male, age 74, both hemispheres
342.9
Reticulotegmental nucleus nTPM: 549.2
2452
Male, age 74, both hemispheres
637.1
2333
Male, age 80, both hemispheres
586.2
2322
Female, age 91, both hemispheres
583.8
2325
Male, age 76, both hemispheres
389.8
Spinal trigeminal nucleus, oral nTPM: 459.7
2164
Male, age 80, both hemispheres
671.5
1978
Male, age 76, both hemispheres
383.8
2737
Female, age 85, both hemispheres
323.7
Subcoeruleus area nTPM: 475.1
2369
Female, age 85, left hemisphere
619.5
2451
Male, age 74, both hemispheres
574.5
1958
Male, age 80, both hemispheres
430.4
2089
Male, age 76, left hemisphere
389.7
2323
Female, age 91, left hemisphere
361.5
Superior olive nTPM: 500.3
2561
Female, age 91, both hemispheres
682.8
2329
Male, age 80, right hemisphere
618.2
2020
Male, age 76, both hemispheres
539.2
1875
Female, age 85, both hemispheres
355.8
2364
Male, age 74, right hemisphere
305.5
Ventral periolivary nuclei nTPM: 493.1
2794
Female, age 91, left hemisphere
621.5
2023
Male, age 76, both hemispheres
538.1
2165
Male, age 80, both hemispheres
498.2
2130
Female, age 85, both hemispheres
314.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 469.7
2456
Female, age 91, both hemispheres
594.8
2161
Male, age 80, both hemispheres
503.1
2359
Male, age 61, both hemispheres
480.4
2840
Female, age 85, both hemispheres
456.9
1959
Male, age 76, both hemispheres
448.5
2449
Male, age 74, both hemispheres
334.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
185.4
Pig sample
Sample description
nTPM
Pons nTPM: 185.4
Samples: 4
Max nTPM: 253.3
Min nTPM: 142.0
Sample A
Female
148.4
Sample B
Female
142.0
Sample C
Male
197.8
Sample D
Male
253.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
