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OPHN1
HPA
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  • SUMMARY

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  • OPHN1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

OPHN1
Synonyms ARHGAP41, MRX60, OPN1
Gene descriptioni

Full gene name according to HGNC.

Oligophrenin 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome X
Cytoband q12
Chromosome location (bp) 67949349 - 68433913
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000079482 (version 109)
Entrez gene 4983
HGNC HGNC:8148
UniProt O60890 (UniProt - Evidence at protein level)
neXtProt NX_O60890
GeneCards OPHN1
Antibodypedia OPHN1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Stimulates GTP hydrolysis of members of the Rho family. Its action on RHOA activity and signaling is implicated in growth and stabilization of dendritic spines, and therefore in synaptic function. Critical for the stabilization of AMPA receptors at postsynaptic sites. Critical for the regulation of synaptic vesicle endocytosis at presynaptic terminals. Required for the localization of NR1D1 to dendrites, can suppress its repressor activity and protect it from proteasomal degradation (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

GTPase activation
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Endocytosis, Neurogenesis
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a Rho-GTPase-activating protein that promotes GTP hydrolysis of Rho subfamily members. Rho proteins are important mediators of intracellular signal transduction, which affects cell migration and cell morphogenesis. Mutations in this gene are responsible for OPHN1-related X-linked cognitive disability with cerebellar hypoplasia and distinctive facial dysmorhphism. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
OPHN1-201
ENSP00000347710
ENST00000355520
O60890
[Direct mapping] Oligophrenin-1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005096 [GTPase activator activity]
GO:0005543 [phospholipid binding]
GO:0005737 [cytoplasm]
GO:0006897 [endocytosis]
GO:0006930 [substrate-dependent cell migration, cell extension]
GO:0007165 [signal transduction]
GO:0007399 [nervous system development]
GO:0007411 [axon guidance]
GO:0015629 [actin cytoskeleton]
GO:0021707 [cerebellar granule cell differentiation]
GO:0021895 [cerebral cortex neuron differentiation]
GO:0030036 [actin cytoskeleton organization]
GO:0030100 [regulation of endocytosis]
GO:0030182 [neuron differentiation]
GO:0030424 [axon]
GO:0030425 [dendrite]
GO:0031175 [neuron projection development]
GO:0034329 [cell junction assembly]
GO:0035023 [regulation of Rho protein signal transduction]
GO:0035255 [ionotropic glutamate receptor binding]
GO:0042995 [cell projection]
GO:0043195 [terminal bouton]
GO:0043197 [dendritic spine]
GO:0045198 [establishment of epithelial cell apical/basal polarity]
GO:0045202 [synapse]
GO:0048488 [synaptic vesicle endocytosis]
GO:0048667 [cell morphogenesis involved in neuron differentiation]
GO:0051966 [regulation of synaptic transmission, glutamatergic]
GO:0098793 [presynapse]
GO:0098794 [postsynapse]
GO:0098880 [maintenance of postsynaptic specialization structure]
GO:0098978 [glutamatergic synapse]
GO:0099149 [regulation of postsynaptic neurotransmitter receptor internalization]
GO:1900242 [regulation of synaptic vesicle endocytosis]
GO:1901799 [negative regulation of proteasomal protein catabolic process]
Show all
802 aa
91.6 kDa
No 0
OPHN1-202
ENSP00000505570
ENST00000467444
A0A7P0T9G2
[Direct mapping] Oligophrenin-1
Show all
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005096 [GTPase activator activity]
GO:0007165 [signal transduction]
Show all
227 aa
26.3 kDa
No 0
OPHN1-205
ENSP00000506478
ENST00000491714
A0A7P0TBB6
[Direct mapping] Oligophrenin-1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
68 aa
8 kDa
No 0
OPHN1-207
ENSP00000505800
ENST00000679748
A0A7P0Z4E9
[Direct mapping] Oligophrenin-1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005096 [GTPase activator activity]
GO:0007165 [signal transduction]
Show all
694 aa
80 kDa
No 0
OPHN1-208
ENSP00000505810
ENST00000679822
A0A7P0T9W4
[Direct mapping] Oligophrenin-1
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005096 [GTPase activator activity]
GO:0007165 [signal transduction]
Show all
641 aa
74.5 kDa
No 0
OPHN1-215
ENSP00000505365
ENST00000680612
A0A7P0T8V5
[Direct mapping] Oligophrenin-1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005096 [GTPase activator activity]
GO:0007165 [signal transduction]
Show all
597 aa
69.9 kDa
No 0
OPHN1-216
ENSP00000505428
ENST00000680804
A0A7P0TBB6
[Direct mapping] Oligophrenin-1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
68 aa
8 kDa
No 0
OPHN1-219
ENSP00000506619
ENST00000681408
A0A7P0TBH4
[Direct mapping] Oligophrenin-1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005096 [GTPase activator activity]
GO:0007165 [signal transduction]
Show all
767 aa
87.6 kDa
No 0

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