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EPB41L2
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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:133.8 nTPM
HPA Brain:205.1 nTPM
GTEx:133.8 nTPM
FANTOM5:302.6 Scaled Tags Per Million
Pig:205.4 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

205.1
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 175.9
2816 Male, age 47, midline 189.6
1981 Female, age 72, midline 186.8
2048 Male, age 55, midline 186.6
2194 Female, age 79, both hemispheres 169.2
2565 Male, age 75, midline 147.1
Cervical spinal cord, dorsal horn
nTPM: 200.4
2296 Male, age 66, both hemispheres 239.2
2173 Female, age 72, unknown 219.1
2069 Male, age 47, both hemispheres 210.7
1877 Male, age 55, unknown 195.7
2721 Male, age 90, both hemispheres 170.1
2297 Male, age 75, both hemispheres 167.6
Cervical spinal cord, ventral horn
nTPM: 205.1
2098 Female, age 72, unknown 227.5
2809 Male, age 90, both hemispheres 224.8
2068 Male, age 55, unknown 204.4
2295 Male, age 66, both hemispheres 203.7
2480 Male, age 75, both hemispheres 196.9
2820 Female, age 79, both hemispheres 173.2

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

133.8
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 133.8
Samples: 159

Max nTPM: 317.3
Min nTPM: 51.1
Std nTPM: 39.8
Median nTPM: 127.2
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 317.3
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 273.5
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 235.2
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 220.6
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 215.2
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 210.5
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 209.7
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 206.8
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 201.4
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 198.3
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 197.6
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 194.2
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 189.1
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 187.8
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 185.2
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 185.0
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 184.8
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 182.4
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 178.0
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 177.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 176.7
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 175.5
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 173.6
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 173.5
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 172.9
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 170.6
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 169.2
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 168.7
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 167.1
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 164.7
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 163.9
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 162.8
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 161.7
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 160.6
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 160.6
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 158.9
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 157.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 156.6
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 156.4
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 156.1
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 152.2
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 151.5
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 150.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 150.2
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 149.2
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 147.6
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 146.9
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 146.0
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 146.0
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 145.9
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 145.8
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 145.4
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 144.1
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 143.4
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 143.3
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 143.2
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 142.6
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 141.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 140.1
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 139.8
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 139.2
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 138.8
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 138.8
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 138.4
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 137.8
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 137.2
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 136.9
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 136.7
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 134.3
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 132.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 132.3
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 131.9
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 131.9
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 131.0
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 130.0
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 129.8
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 129.0
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 128.4
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 128.1
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 127.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 127.2
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 127.0
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 126.1
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 125.9
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 125.7
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 125.5
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 125.1
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 124.9
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 122.6
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 122.4
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 121.9
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 121.9
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 121.8
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 121.5
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 121.2
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 121.1
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 121.0
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 120.4
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 120.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 119.9
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 119.4
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 119.1
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 117.5
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 117.3
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 117.2
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 117.0
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 116.0
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 115.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 114.8
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 114.0
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 112.9
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 112.8
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 111.9
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 111.5
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 111.0
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 110.2
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 109.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 109.6
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 108.6
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 108.4
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 107.8
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 107.4
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 106.9
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 106.3
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 106.0
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 105.7
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 104.9
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 104.7
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 104.4
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 102.9
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 102.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 100.9
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 100.8
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 99.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 98.6
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 98.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 98.3
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 97.5
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 97.3
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 94.7
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 93.2
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 93.2
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 92.9
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 89.3
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 86.3
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 85.7
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 85.0
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 84.9
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 83.0
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 81.7
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 75.3
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 70.8
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 70.1
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 68.2
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 67.6
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 67.0
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 53.7
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 53.4
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 51.1
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

302.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 302.6
FF:10181-103D1 60 years, female 384.0
FF:10159-103A6 76 years, female 221.2

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

205.4
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 205.5
Samples: 4

Max nTPM: 257.7
Min nTPM: 137.3
Sample A Female 137.3
Sample B Female 236.9
Sample C Male 257.7
Sample D Male 189.9
Ventral spinal cord
nTPM: 184.0
Samples: 4

Max nTPM: 204.0
Min nTPM: 161.2
Sample A Female 161.2
Sample B Female 177.9
Sample C Male 192.7
Sample D Male 204.0

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