We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SMARCA2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • SMARCA2
BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: High
Cells in molecular layer: Medium
Purkinje cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:45.9 nTPM
HPA Brain:333.6 nTPM
GTEx:45.9 nTPM
FANTOM5:143.9 Scaled Tags Per Million
Mouse:65.5 nTPM

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA029981Antibody CAB037276
Purkinje cells HighMedium
Cells in granular layer HighMedium
Cells in molecular layer MediumMedium





CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

333.6
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 330.3
2006 Male, age 61, right hemisphere 449.5
1769 Male, age 76, right hemisphere 376.4
2055 Female, age 91, right hemisphere 351.6
2101 Male, age 74, right hemisphere 332.9
1774 Male, age 80, left hemisphere 298.8
1788 Male, age 55, unknown 294.8
2003 Female, age 85, right hemisphere 284.8
1768 Female, age 72, unknown 253.5
Cerebellar nuclei
nTPM: 213.5
2175 Male, age 61, right hemisphere 284.0
1966 Female, age 91, left hemisphere 231.7
2318 Male, age 74, left hemisphere 225.2
2177 Female, age 85, both hemispheres 212.9
2783 Female, age 72, unknown 207.6
2005 Male, age 80, left hemisphere 195.7
1879 Male, age 55, unknown 193.1
1871 Male, age 74, unknown 189.1
2882 Male, age 76, left hemisphere 181.9
Flocculonodular lobe
nTPM: 333.6
2176 Female, age 91, right hemisphere 382.2
2004 Male, age 61, right hemisphere 351.6
1792 Male, age 74, unknown 349.6
1767 Male, age 76, left hemisphere 345.8
1771 Male, age 80, left hemisphere 338.2
1765 Male, age 55, unknown 293.3
1835 Female, age 85, right hemisphere 274.6
Vermis
nTPM: 308.7
1770 Male, age 76, left hemisphere 361.3
1778 Female, age 91, left hemisphere 351.3
1988 Female, age 85, left hemisphere 346.4
1751 Male, age 74, right hemisphere 317.9
1928 Female, age 72, unknown 305.8
1825 Male, age 74, unknown 302.8
2834 Male, age 80, left hemisphere 287.5
1766 Male, age 55, unknown 285.7
2460 Male, age 61, both hemispheres 219.2

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.9
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 45.9
Samples: 215

Max nTPM: 76.3
Min nTPM: 15.3
Std nTPM: 10.8
Median nTPM: 46.7
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 76.3
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 72.2
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 70.2
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 69.5
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 67.9
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 67.4
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 67.4
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 67.3
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 63.6
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 63.0
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 62.3
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 61.6
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 61.6
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 61.6
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 61.4
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 60.1
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 60.1
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 59.4
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 59.4
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 58.9
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 58.7
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 58.6
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 58.5
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 57.9
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 57.9
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 57.5
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 57.5
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 57.5
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 57.4
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 57.3
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 56.9
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 56.8
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 56.6
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 56.2
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 55.8
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 55.6
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 55.4
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 55.2
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 54.9
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 54.8
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 54.7
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 54.6
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 54.5
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 54.4
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 54.4
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 54.4
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 53.9
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 53.8
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 53.7
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 53.0
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 52.9
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 52.8
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 52.6
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 52.4
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 52.2
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 52.0
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 52.0
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 51.2
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 51.2
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 51.1
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 51.0
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 50.9
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 50.7
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 50.7
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 50.5
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 50.5
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 50.4
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 50.3
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 50.1
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 50.0
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 49.8
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 49.8
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 49.7
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 49.5
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 49.5
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 49.4
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 49.4
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 49.3
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 49.3
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 49.3
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 49.2
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 49.2
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 49.1
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 49.1
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 48.8
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 48.8
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 48.7
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 48.6
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 48.4
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 48.4
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 48.3
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 48.3
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 48.3
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 48.3
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 48.3
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 48.0
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 47.9
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 47.8
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 47.6
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 47.4
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 47.2
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 47.2
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 47.1
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 46.8
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 46.8
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 46.8
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 46.7
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 46.7
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 46.6
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 46.4
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 46.3
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 46.2
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 45.9
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 45.9
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 45.9
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 45.5
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 45.4
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 45.4
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 45.4
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 45.3
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 45.1
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 44.9
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 44.9
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 44.8
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 44.7
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 44.7
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 44.7
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 44.6
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 44.6
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 44.6
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 44.5
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 44.5
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 44.3
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 44.0
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 44.0
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 43.6
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 43.6
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 43.6
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 43.4
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 43.2
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 43.2
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 42.9
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 42.8
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 42.8
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 42.7
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 42.6
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 42.5
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 42.5
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 42.3
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 42.2
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 42.0
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 41.9
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 41.9
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 41.8
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 41.7
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 41.1
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 41.1
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 40.5
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 40.3
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 40.2
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 39.7
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 39.7
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 39.6
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 39.4
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 39.2
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 39.0
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 38.6
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 38.5
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 38.5
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 38.2
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 38.1
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 38.0
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 37.9
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 37.8
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 37.6
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 37.5
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 37.2
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 37.0
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 37.0
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 36.9
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 36.8
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 36.8
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 36.7
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 36.6
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 36.3
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 36.1
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 35.7
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 34.8
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 34.4
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 34.0
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 33.9
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 33.9
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 32.8
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 32.4
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 31.9
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 31.6
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 31.3
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 31.1
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 30.6
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 30.4
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 28.7
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 28.3
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 26.5
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 26.5
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 26.3
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 25.8
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 21.0
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 19.9
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 19.5
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 17.7
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 16.0
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 16.0
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 15.6
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 15.4
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 15.3
Show allShow less
Brain - Cerebellum
Average nTPM: 37.8
Samples: 241

Max nTPM: 77.1
Min nTPM: 14.8
Std nTPM: 7.7
Median nTPM: 37.4
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 77.1
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 66.2
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 66.2
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 56.0
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 55.2
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 53.6
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 53.5
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 52.4
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 51.2
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 50.9
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 50.4
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 50.1
GTEX-WL46-2826-SM-3LK81 50-59 years, male 49.6
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 49.5
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 48.6
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 48.3
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 48.2
GTEX-145LS-3026-SM-5O99S 60-69 years, female 48.0
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 47.8
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 47.7
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 47.5
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 47.4
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 46.9
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 46.9
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 46.0
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 46.0
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 45.8
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 45.8
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 45.7
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 45.5
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 45.4
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 44.6
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 44.6
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 44.6
GTEX-12126-0926-SM-5FQTW 20-29 years, male 44.4
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 44.3
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 44.3
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 44.3
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 44.3
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 44.2
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 44.2
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 43.8
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 43.8
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 43.6
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 43.5
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 43.5
GTEX-1B933-3026-SM-731DB 50-59 years, female 43.5
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 43.2
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 43.1
GTEX-1192X-3226-SM-5987D 50-59 years, male 43.0
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 43.0
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 42.7
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 42.7
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 42.6
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 42.6
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 42.6
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 42.5
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 42.4
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 42.4
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 42.3
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 41.9
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 41.9
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 41.9
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 41.6
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 41.6
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 41.5
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 41.5
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 41.4
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 41.3
GTEX-18465-2926-SM-7KFSE 50-59 years, male 41.2
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 41.2
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 41.2
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 41.1
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 41.1
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 41.1
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 41.0
GTEX-15G19-2826-SM-6M48K 60-69 years, male 40.9
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 40.7
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 40.6
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 40.6
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 40.3
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 40.2
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 40.2
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 40.0
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 39.8
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 39.7
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 39.7
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 39.7
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 39.7
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 39.7
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 39.6
GTEX-11ONC-3026-SM-5985W 60-69 years, male 39.5
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 39.5
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 39.5
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 39.3
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 39.2
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 39.2
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 39.0
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 38.9
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 38.8
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 38.7
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 38.7
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 38.7
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 38.5
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 38.5
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 38.5
GTEX-14ABY-3026-SM-664NE 50-59 years, male 38.2
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 38.2
GTEX-14E6D-2926-SM-664OP 50-59 years, male 38.1
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 38.1
GTEX-13112-2926-SM-5DUWT 50-59 years, male 37.9
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 37.9
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 37.9
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 37.8
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 37.8
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 37.7
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 37.6
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 37.6
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 37.6
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 37.5
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 37.4
GTEX-RU72-2926-SM-2TF66 50-59 years, female 37.4
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 37.3
GTEX-144GL-2926-SM-5O99F 50-59 years, male 37.1
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 37.1
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 37.0
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 37.0
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 37.0
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 37.0
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 36.9
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 36.9
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 36.9
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 36.7
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 36.7
GTEX-11NUK-3026-SM-5986K 50-59 years, male 36.5
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 36.5
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 36.4
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 36.4
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 36.3
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 36.3
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 36.3
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 36.2
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 36.1
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 36.0
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 36.0
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 36.0
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 36.0
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 35.9
GTEX-17EVP-2926-SM-793BU 40-49 years, male 35.8
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 35.7
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 35.7
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 35.6
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 35.5
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 35.3
GTEX-14PN4-3026-SM-664O4 50-59 years, male 35.2
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 35.1
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 35.1
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 35.0
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 35.0
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 35.0
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 34.9
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 34.8
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 34.8
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 34.7
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 34.7
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 34.5
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 34.5
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 34.3
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 34.3
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 34.2
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 34.0
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 33.9
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 33.8
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 33.8
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 33.6
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 33.5
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 33.4
GTEX-11DYG-2926-SM-5H132 60-69 years, male 33.3
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 33.3
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 33.2
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 33.1
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 33.0
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 32.9
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 32.9
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 32.7
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 32.7
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 32.6
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 32.5
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 32.2
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 32.2
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 32.1
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 32.1
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 31.9
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 31.9
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 31.9
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 31.8
GTEX-X261-3126-SM-4PQZC 50-59 years, male 31.6
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 31.6
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 31.4
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 31.2
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 31.1
GTEX-17HII-2926-SM-79OMK 50-59 years, male 30.9
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 30.7
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 30.7
GTEX-11EI6-2926-SM-5985U 60-69 years, male 30.6
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 30.6
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 30.3
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 30.1
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 30.1
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 29.9
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 29.8
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 29.6
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 29.5
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 29.4
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 29.4
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 29.4
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 29.3
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 29.2
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 29.2
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 29.1
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 29.1
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 28.8
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 28.8
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 28.8
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 28.1
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 28.0
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 27.6
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 26.8
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 26.5
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 26.1
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 25.0
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 24.6
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 24.2
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 24.1
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 21.8
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 20.9
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 20.7
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 19.9
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 18.4
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 17.6
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 14.8
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

143.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 143.9
FF:10166-103B4 76 years, female 179.4
FF:10083-102B2 22-68 years, mixed 108.4

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.5
Mouse sample Sample description nTPM
Cerebellum
nTPM: 65.5
Samples: 4

Max nTPM: 74.8
Min nTPM: 57.4
Sample A Male 74.8
Sample B Male 57.4
Sample C Female 65.9
Sample D Female 63.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org