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HSP90AA1
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  • HSP90AA1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:586.5 nTPM
FANTOM5:1404.3 Scaled Tags Per Million
Pig:813.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB002058
Glial cells Not detected
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

586.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 586.5
Samples: 246

Max nTPM: 3349.9
Min nTPM: 286.8
Std nTPM: 345.5
Median nTPM: 495.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 3349.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 2619.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 2075.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 2054.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 1911.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1522.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1508.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1410.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 1407.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 1208.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1186.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1143.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1118.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 1107.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1107.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1100.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1097.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1077.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 971.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 947.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 945.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 936.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 932.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 914.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 892.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 887.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 859.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 830.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 815.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 812.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 795.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 794.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 776.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 764.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 758.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 748.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 734.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 722.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 718.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 718.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 703.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 702.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 699.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 687.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 676.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 675.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 674.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 647.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 641.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 641.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 633.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 631.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 629.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 628.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 627.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 620.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 617.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 617.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 616.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 613.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 612.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 609.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 607.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 601.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 601.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 596.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 594.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 593.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 584.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 581.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 577.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 575.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 572.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 567.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 563.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 561.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 561.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 559.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 559.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 558.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 556.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 551.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 549.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 548.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 547.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 546.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 542.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 538.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 537.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 535.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 535.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 535.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 534.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 533.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 533.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 531.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 529.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 526.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 522.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 521.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 521.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 518.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 517.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 516.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 514.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 514.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 513.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 513.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 511.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 510.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 510.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 506.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 504.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 504.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 503.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 502.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 501.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 501.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 501.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 496.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 496.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 495.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 495.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 495.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 494.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 494.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 494.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 493.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 493.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 492.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 491.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 491.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 488.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 487.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 484.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 484.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 479.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 479.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 478.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 477.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 473.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 472.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 470.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 469.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 466.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 464.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 463.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 462.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 462.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 461.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 461.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 460.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 459.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 459.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 457.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 456.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 455.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 451.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 450.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 447.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 447.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 447.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 446.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 446.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 442.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 440.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 439.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 438.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 437.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 435.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 435.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 435.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 433.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 431.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 430.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 430.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 427.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 427.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 426.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 422.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 417.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 415.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 415.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 415.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 414.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 413.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 413.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 411.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 410.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 409.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 407.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 407.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 407.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 406.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 404.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 401.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 401.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 397.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 397.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 396.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 395.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 395.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 394.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 394.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 392.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 391.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 391.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 389.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 386.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 385.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 383.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 381.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 381.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 378.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 377.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 376.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 375.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 375.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 373.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 372.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 372.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 371.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 368.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 367.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 366.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 364.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 362.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 361.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 357.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 356.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 355.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 352.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 348.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 337.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 337.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 332.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 331.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 331.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 324.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 322.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 320.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 310.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 307.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 299.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 290.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 286.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1404.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1404.3
FF:10164-103B2 76 years, female 1404.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

813.6
Pig sample Sample description nTPM
Caudate
nTPM: 813.6
Samples: 4

Max nTPM: 884.6
Min nTPM: 756.9
Sample A Female 808.5
Sample B Female 804.3
Sample C Male 884.6
Sample D Male 756.9

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