We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
LRP2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • LRP2
TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:15.9 nTPM
HPA Brain:34.8 nTPM
GTEx:15.9 nTPM
FANTOM5:27.4 Scaled Tags Per Million
Pig:2.8 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.8
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 25.6
1981 Female, age 72, midline 30.2
2816 Male, age 47, midline 29.8
2194 Female, age 79, both hemispheres 25.9
2048 Male, age 55, midline 24.2
2565 Male, age 75, midline 17.7
Cervical spinal cord, dorsal horn
nTPM: 34.8
2296 Male, age 66, both hemispheres 70.8
2173 Female, age 72, unknown 47.1
2069 Male, age 47, both hemispheres 33.3
1877 Male, age 55, unknown 24.6
2297 Male, age 75, both hemispheres 17.9
2721 Male, age 90, both hemispheres 15.2
Cervical spinal cord, ventral horn
nTPM: 30.2
2068 Male, age 55, unknown 40.4
2820 Female, age 79, both hemispheres 32.5
2480 Male, age 75, both hemispheres 28.3
2098 Female, age 72, unknown 28.2
2295 Male, age 66, both hemispheres 26.5
2809 Male, age 90, both hemispheres 25.0

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15.9
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 15.9
Samples: 159

Max nTPM: 42.8
Min nTPM: 2.6
Std nTPM: 7.1
Median nTPM: 14.7
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 42.8
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 42.1
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 37.4
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 35.2
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 31.8
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 31.8
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 30.1
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 28.5
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 28.2
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 28.1
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 27.3
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 27.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 27.1
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 26.4
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 25.3
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 24.6
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 24.4
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 24.2
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 24.1
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 23.9
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 23.7
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 23.6
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 23.1
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 23.1
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 22.3
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 22.2
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 22.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 22.1
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 21.9
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 21.8
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 21.6
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 21.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 21.4
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 21.3
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 21.2
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 21.1
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 21.1
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 20.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 19.9
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 19.6
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 19.5
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 19.4
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 19.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 19.3
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 19.3
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 19.3
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 18.8
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 18.6
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 18.5
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 18.2
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 18.1
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 18.1
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 18.0
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 17.9
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 17.7
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 17.5
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 17.4
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 17.3
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 17.0
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 16.9
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 16.6
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 16.4
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 16.3
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 16.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 16.2
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 15.8
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 15.6
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 15.5
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 15.5
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 15.5
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 15.3
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 15.2
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 15.2
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 15.2
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 15.1
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 15.1
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 14.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 14.7
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 14.7
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 14.7
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 14.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 14.6
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 14.5
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 14.4
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 14.2
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 14.1
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 14.1
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 13.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 13.6
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 13.5
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 13.5
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 13.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 13.4
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 13.3
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 13.1
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 13.0
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 12.9
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 12.9
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 12.8
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 12.6
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 12.6
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 12.6
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 12.5
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 12.4
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 12.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 12.4
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 12.4
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 11.9
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 11.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 11.8
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 11.8
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 11.7
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 11.6
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 11.3
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 11.2
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 11.1
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 11.0
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 11.0
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 11.0
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 11.0
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 10.9
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 10.9
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 10.8
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 10.6
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 10.6
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 10.5
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 10.4
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 10.4
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 10.1
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 10.1
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 10.0
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 9.9
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 9.7
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 9.6
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 9.6
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 9.3
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 9.3
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 8.8
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 8.8
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 8.7
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 8.5
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 8.5
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 8.4
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 8.2
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 7.7
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 7.4
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 7.3
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 7.1
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 6.6
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 6.4
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 5.9
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 5.6
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 5.6
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 5.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 5.0
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 4.6
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 4.4
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 4.2
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 2.6
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

27.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 27.4
FF:10159-103A6 76 years, female 34.4
FF:10181-103D1 60 years, female 20.4

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2.8
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 2.8
Samples: 4

Max nTPM: 4.5
Min nTPM: 1.7
Sample A Female 3.2
Sample B Female 4.5
Sample C Male 1.7
Sample D Male 1.7
Ventral spinal cord
nTPM: 2.7
Samples: 4

Max nTPM: 3.9
Min nTPM: 1.5
Sample A Female 3.4
Sample B Female 3.9
Sample C Male 1.5
Sample D Male 2.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org