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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:3.7 nTPM
HPA Brain:63.3 nTPM
GTEx:3.7 nTPM
FANTOM5:35.5 Scaled Tags Per Million
Pig:51.2 nTPM
Mouse:25.6 nTPM
Allen mouse:0.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA074393
Glial cells Not detected
Neuronal cells Not detected


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 22.7
2481 Female, age 94, left hemisphere 35.9
2288 Male, age 75, left hemisphere 25.9
1854 Male, age 80, left hemisphere 24.0
2289 Male, age 61, right hemisphere 21.6
1857 Female, age 85, left hemisphere 20.5
1781 Male, age 74, unknown 19.3
2290 Female, age 72, unknown 17.4
2846 Female, age 79, unknown 17.1
Globus pallidus, externus
nTPM: 63.3
1996 Male, age 80, right hemisphere 86.4
2646 Male, age 61, right hemisphere 79.5
2567 Female, age 72, unknown 60.6
2395 Male, age 75, both hemispheres 45.0
2772 Female, age 79, unknown 45.0
Globus pallidus, internus
nTPM: 59.9
2037 Male, age 80, right hemisphere 81.1
1818 Male, age 74, unknown 70.6
2483 Female, age 94, right hemisphere 64.4
2287 Male, age 75, right hemisphere 63.5
2566 Female, age 72, unknown 48.7
2111 Female, age 85, right hemisphere 48.5
2778 Female, age 91, both hemispheres 42.6
Nucleus accumbens
nTPM: 19.3
2732 Male, age 80, right hemisphere 25.5
2698 Female, age 72, unknown 24.8
1806 Female, age 85, left hemisphere 20.9
2286 Male, age 75, left hemisphere 20.2
1856 Female, age 91, right hemisphere 18.7
2824 Male, age 61, right hemisphere 15.0
2391 Female, age 94, left hemisphere 14.6
1783 Male, age 74, unknown 14.5
Nucleus basalis of Meynert
nTPM: 40.8
2569 Male, age 61, both hemispheres 87.1
2821 Male, age 75, both hemispheres 27.4
2484 Female, age 94, left hemisphere 26.5
2393 Male, age 80, right hemisphere 22.3
Nucleus of the diagonal band
nTPM: 21.7
1979 Male, age 74, unknown 39.5
1812 Female, age 91, both hemispheres 20.2
2029 Male, age 61, right hemisphere 18.9
2775 Male, age 80, right hemisphere 17.6
2195 Female, age 85, both hemispheres 12.2
Putamen
nTPM: 23.2
2647 Male, age 75, left hemisphere 40.5
2482 Female, age 94, left hemisphere 27.8
2489 Female, age 72, unknown 23.7
1829 Male, age 74, unknown 20.7
2466 Female, age 79, unknown 18.2
1838 Male, age 80, right hemisphere 17.1
1937 Female, age 91, right hemisphere 13.9
Septal nuclei
nTPM: 21.1
2199 Male, age 80, right hemisphere 48.1
2394 Male, age 61, left hemisphere 27.1
2059 Female, age 85, both hemispheres 20.7
2009 Female, age 91, both hemispheres 16.9
2629 Female, age 94, right hemisphere 15.1
2031 Female, age 72, unknown 11.7
1960 Male, age 74, unknown 8.1
Stria terminalis, bed nucleus
nTPM: 28.8
2201 Male, age 74, unknown 48.2
2486 Female, age 94, both hemispheres 20.1
1974 Female, age 91, both hemispheres 18.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 3.7
Samples: 246

Max nTPM: 17.6
Min nTPM: 0.8
Std nTPM: 1.7
Median nTPM: 3.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 17.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 11.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 9.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 9.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 6.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 6.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 6.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 6.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 6.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 6.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 6.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 6.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 6.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 6.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 6.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 6.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 6.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 6.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 6.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 6.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 6.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 5.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 5.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 5.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 5.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 5.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 5.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 5.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 5.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 5.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 5.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 5.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 5.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 5.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 5.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 5.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 5.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 5.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 5.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 5.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 5.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 5.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 5.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 5.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 5.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 5.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 4.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 4.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 4.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 4.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 4.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 4.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 4.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 4.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 4.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 4.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 4.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 4.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 4.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 4.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 4.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 4.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 4.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 4.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 4.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 4.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 4.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 4.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 4.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 4.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 4.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 4.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 4.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 4.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 4.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 4.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 4.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 4.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 4.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 4.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 4.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 4.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 4.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 4.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 4.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 4.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 4.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 4.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 4.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 4.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 4.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 4.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 4.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 4.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 4.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 4.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 4.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 4.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 4.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 4.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 3.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 3.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 3.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 3.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 3.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 3.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 3.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 3.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 3.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 3.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 3.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 3.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 3.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 3.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 3.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 3.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 3.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 3.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 3.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 3.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 3.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 3.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 3.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 3.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 3.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 3.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 3.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 3.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 3.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 3.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 3.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 3.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 3.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 3.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 3.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 3.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 3.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 3.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 3.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 3.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 3.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 3.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 3.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 3.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 3.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 3.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 3.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 3.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 3.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 3.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 3.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 3.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 3.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 3.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 3.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 3.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 3.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 2.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 2.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 2.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 2.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 2.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 2.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 2.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 2.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 2.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 2.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 2.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 2.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 2.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 2.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 2.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 2.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 2.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 2.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 2.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 2.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 2.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 2.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 2.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 2.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 2.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 2.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 2.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 2.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 2.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 2.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 2.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 2.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 2.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 2.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 2.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 2.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 2.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 2.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 2.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 2.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 2.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 2.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 2.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 2.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 2.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 2.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 2.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 2.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 2.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 2.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 2.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 2.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 2.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 2.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 2.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 2.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 2.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 2.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 1.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 1.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 1.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 1.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 1.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 1.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 1.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 1.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 1.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 1.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 1.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 1.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 1.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 1.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 0.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 0.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 0.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 3.6
Samples: 246

Max nTPM: 36.8
Min nTPM: 0.3
Std nTPM: 2.9
Median nTPM: 3.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 36.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 14.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 14.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 11.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 9.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 9.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 9.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 8.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 8.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 7.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 7.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 7.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 7.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 7.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 7.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 7.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 7.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 6.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 6.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 6.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 6.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 6.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 6.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 6.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 6.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 6.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 6.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 6.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 6.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 6.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 5.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 5.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 5.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 5.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 5.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 5.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 5.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 4.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 4.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 4.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 4.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 4.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 4.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 4.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 4.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 4.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 4.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 4.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 4.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 4.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 4.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 4.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 4.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 4.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 4.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 4.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 4.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 4.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 4.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 4.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 4.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 4.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 4.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 4.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 4.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 4.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 4.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 4.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 4.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 4.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 4.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 4.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 4.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 4.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 4.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 3.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 3.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 3.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 3.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 3.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 3.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 3.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 3.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 3.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 3.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 3.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 3.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 3.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 3.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 3.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 3.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 3.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 3.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 3.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 3.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 3.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 3.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 3.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 3.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 3.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 3.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 3.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 3.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 3.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 3.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 3.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 3.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 3.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 3.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 3.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 3.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 3.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 3.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 3.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 3.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 3.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 3.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 3.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 3.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 3.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 3.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 3.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 3.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 3.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 3.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 2.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 2.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 2.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 2.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 2.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 2.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 2.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 2.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 2.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 2.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 2.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 2.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 2.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 2.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 2.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 2.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 2.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 2.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 2.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 2.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 2.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 2.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 2.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 2.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 2.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 2.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 2.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 2.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 2.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 2.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 2.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 2.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 2.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 2.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 2.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 2.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 2.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 2.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 2.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 2.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 2.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 2.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 2.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 2.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 2.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 2.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 2.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 2.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 2.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 2.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 2.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 2.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 2.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 2.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 2.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 2.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 2.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 2.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 2.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 2.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 2.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 2.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 2.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 2.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 2.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 2.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 2.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 2.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 2.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 2.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 1.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 1.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 1.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 1.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 1.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 1.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 1.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 1.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 1.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 1.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 1.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 1.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 1.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 1.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 1.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 1.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 1.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 1.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 1.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 1.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 1.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 1.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 1.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 1.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 1.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 1.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 1.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 1.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 1.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 1.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 1.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 1.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 1.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 1.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 1.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 1.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 1.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 1.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 1.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 1.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 1.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 1.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 1.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 0.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 0.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 0.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 0.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 0.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 0.3
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Brain - Putamen (basal ganglia)
Average nTPM: 3.6
Samples: 205

Max nTPM: 9.0
Min nTPM: 0.6
Std nTPM: 1.8
Median nTPM: 3.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 9.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 8.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 8.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 8.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 8.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 8.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 8.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 7.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 7.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 7.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 7.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 6.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 6.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 6.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 6.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 6.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 6.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 6.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 6.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 6.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 6.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 6.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 6.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 5.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 5.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 5.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 5.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 5.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 5.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 5.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 5.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 5.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 5.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 5.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 5.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 5.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 5.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 5.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 5.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 5.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 5.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 5.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 5.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 5.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 5.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 5.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 4.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 4.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 4.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 4.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 4.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 4.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 4.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 4.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 4.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 4.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 4.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 4.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 4.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 4.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 4.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 4.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 4.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 4.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 4.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 4.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 4.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 4.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 4.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 4.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 4.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 4.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 4.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 4.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 4.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 4.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 4.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 3.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 3.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 3.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 3.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 3.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 3.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 3.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 3.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 3.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 3.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 3.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 3.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 3.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 3.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 3.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 3.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 3.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 3.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 3.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 3.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 3.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 3.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 3.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 3.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 3.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 3.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 3.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 3.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 3.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 3.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 3.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 3.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 3.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 3.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 3.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 3.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 3.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 2.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 2.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 2.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 2.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 2.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 2.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 2.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 2.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 2.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 2.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 2.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 2.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 2.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 2.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 2.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 2.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 2.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 2.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 2.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 2.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 2.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 2.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 2.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 2.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 2.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 2.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 2.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 2.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 2.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 2.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 2.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 2.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 2.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 2.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 2.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 2.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 2.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 2.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 2.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 2.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 2.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 2.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 2.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 2.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 2.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 2.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 2.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 2.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 2.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 2.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 2.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 2.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 2.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 1.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 1.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 1.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 1.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 1.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 1.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 1.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 1.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 1.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 1.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 1.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 1.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 1.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 1.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 1.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 1.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 1.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 1.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 1.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 0.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 0.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 0.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 0.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 0.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 0.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 0.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

35.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 22.5
FF:10164-103B2 76 years, female 22.5
Nucleus accumbens
Scaled Tags Per Million: 20.1
FF:10037-101F1 23-56 years, mixed 20.1
Putamen
Scaled Tags Per Million: 26.8
FF:10176-103C5 60 years, female 26.8
Globus pallidus
Scaled Tags Per Million: 35.5
FF:10175-103C4 60 years, female 37.6
FF:10161-103A8 76 years, female 33.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.2
Pig sample Sample description nTPM
Caudate
nTPM: 41.5
Samples: 4

Max nTPM: 52.5
Min nTPM: 30.3
Sample A Female 52.5
Sample B Female 45.6
Sample C Male 37.6
Sample D Male 30.3
Putamen
nTPM: 46.5
Samples: 4

Max nTPM: 55.0
Min nTPM: 35.0
Sample A Female 54.4
Sample B Female 41.6
Sample C Male 55.0
Sample D Male 35.0
Septum
nTPM: 51.2
Samples: 4

Max nTPM: 63.5
Min nTPM: 41.4
Sample A Female 41.4
Sample B Female 43.3
Sample C Male 56.7
Sample D Male 63.5
Ventral pallidum
nTPM: 43.3
Samples: 4

Max nTPM: 58.5
Min nTPM: 29.1
Sample A Female 36.4
Sample B Female 49.3
Sample C Male 58.5
Sample D Male 29.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

25.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 14.7
Samples: 4

Max nTPM: 22.4
Min nTPM: 11.2
Sample A Male 22.4
Sample B Male 12.7
Sample C Female 11.2
Sample D Female 12.3
Septum
nTPM: 25.6
Samples: 4

Max nTPM: 31.6
Min nTPM: 20.4
Sample A Male 20.4
Sample B Male 24.6
Sample C Female 31.6
Sample D Female 25.6
Ventral forebrain
nTPM: 14.1
Samples: 4

Max nTPM: 19.0
Min nTPM: 11.7
Sample A Male 12.9
Sample B Male 19.0
Sample C Female 11.7
Sample D Female 12.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.8
74431478 Antisense, RP_060207_02_A10, Mouse strain C57BL/6J (56 days, male) 0.8
Pallidum
Expression energy: 0.1
74431478 Antisense, RP_060207_02_A10, Mouse strain C57BL/6J (56 days, male) 0.1

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