HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:50.6 nTPM
HPA Brain:89.2 nTPM
GTEx:50.6 nTPM
FANTOM5:113.4 Scaled Tags Per Million
Pig:155.5 nTPM
Mouse:89.0 nTPM
Allen mouse:14.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021466Antibody HPA024424
Glial cells Not detectedNot detected
Neuronal cells LowLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 89.2
Sample id Sample description nTPM
Hippocampus
nTPM: 71.0
2621 Female, age 67, right hemisphere 85.0
1898 Male, age 80, left hemisphere 80.6
1855 Male, age 76, left hemisphere 80.2
2148 Female, age 91, left hemisphere 65.3
1911 Female, age 85, right hemisphere 59.2
2529 Female, age 94, left hemisphere 55.5
Dentate gyrus
nTPM: 70.7
2010 Male, age 76, both hemispheres 79.3
1927 Female, age 91, both hemispheres 77.2
2531 Female, age 67, both hemispheres 74.7
2246 Female, age 85, both hemispheres 73.1
2530 Female, age 94, left hemisphere 65.0
2528 Male, age 74, both hemispheres 54.9
Entorhinal gyrus
nTPM: 70.3
2613 Female, age 94, left hemisphere 89.4
1787 Male, age 76, left hemisphere 76.1
1938 Female, age 85, left hemisphere 72.4
2764 Male, age 80, right hemisphere 71.6
2117 Female, age 91, right hemisphere 56.3
2686 Male, age 75, right hemisphere 56.2
Hippocampus, CA1
nTPM: 77.9
2749 Male, age 80, left hemisphere 99.3
2045 Male, age 76, both hemispheres 95.4
1873 Female, age 85, both hemispheres 75.6
2082 Female, age 91, right hemisphere 65.4
2527 Male, age 74, both hemispheres 53.8
Hippocampus, CA2
nTPM: 69.3
1892 Male, age 76, both hemispheres 87.9
1940 Female, age 85, left hemisphere 85.1
1963 Male, age 80, left hemisphere 69.4
2437 Female, age 94, left hemisphere 64.6
2113 Female, age 91, right hemisphere 63.5
2249 Male, age 74, both hemispheres 45.4
Hippocampus, CA3
nTPM: 76.2
2620 Female, age 94, left hemisphere 97.7
2137 Male, age 80, left hemisphere 93.2
1867 Male, age 76, both hemispheres 81.5
2861 Female, age 67, both hemispheres 72.2
1891 Female, age 85, both hemispheres 62.1
2436 Male, age 74, both hemispheres 50.7
Parahippocampal cortex
nTPM: 73.3
2693 Female, age 94, both hemispheres 89.0
1850 Male, age 80, both hemispheres 84.9
2018 Male, age 76, both hemispheres 81.8
2250 Female, age 67, right hemisphere 77.9
2245 Female, age 91, both hemispheres 76.4
1933 Female, age 85, both hemispheres 74.8
2532 Female, age 72, left hemisphere 71.7
2622 Female, age 67, right hemisphere 65.1
1990 Female, age 91, right hemisphere 63.9
2692 Male, age 74, both hemispheres 47.9
Perirhinal gyrus
nTPM: 89.2
2521 Female, age 94, right hemisphere 99.9
1841 Female, age 85, right hemisphere 94.8
1794 Male, age 80, right hemisphere 94.1
1847 Female, age 91, left hemisphere 86.3
2848 Male, age 76, right hemisphere 70.8
Subiculum
nTPM: 64.3
2042 Male, age 76, both hemispheres 71.4
1901 Male, age 80, both hemispheres 68.9
1977 Female, age 85, both hemispheres 68.3
2729 Female, age 91, right hemisphere 65.6
2438 Female, age 94, left hemisphere 56.8
2619 Male, age 74, both hemispheres 54.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 50.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 50.6
Samples: 197

Max nTPM: 93.5
Min nTPM: 18.2
Std nTPM: 16.8
Median nTPM: 49.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 93.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 86.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 86.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 85.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 84.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 82.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 82.4
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 82.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 81.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 81.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 79.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 113.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 113.4
FF:10169-103B7 60 years, female 132.9
FF:10153-102I9 76 years, female 94.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 155.5
Pig sample Sample description nTPM
Subiculum
nTPM: 122.3
Samples: 4

Max nTPM: 161.0
Min nTPM: 104.7
Sample A Female 161.0
Sample B Female 115.5
Sample C Male 108.0
Sample D Male 104.7
Dorsal hippocampus
nTPM: 146.8
Samples: 4

Max nTPM: 176.6
Min nTPM: 111.9
Sample A Female 176.6
Sample B Female 158.1
Sample C Male 111.9
Sample D Male 140.7
Entorhinal cortex
nTPM: 155.6
Samples: 4

Max nTPM: 185.9
Min nTPM: 141.7
Sample A Female 185.9
Sample B Female 150.3
Sample C Male 144.3
Sample D Male 141.7
Ventral hippocampus
nTPM: 121.7
Samples: 4

Max nTPM: 157.3
Min nTPM: 89.7
Sample A Female 110.0
Sample B Female 89.7
Sample C Male 129.6
Sample D Male 157.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 89.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 89.0
Samples: 4

Max nTPM: 104.4
Min nTPM: 82.2
Sample A Male 83.8
Sample B Male 85.7
Sample C Female 82.2
Sample D Female 104.4
Hippocampal formation
nTPM: 87.3
Samples: 4

Max nTPM: 93.4
Min nTPM: 78.5
Sample A Male 85.2
Sample B Male 93.4
Sample C Female 91.9
Sample D Female 78.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 14.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.4
69407122 Antisense, RP_050412_02_H10, Mouse strain C57BL/6J (56 days, male) 14.4

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