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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:53.1 nTPM
HPA Brain:106.6 nTPM
GTEx:53.1 nTPM
FANTOM5:72.9 Scaled Tags Per Million
Pig:31.7 nTPM
Mouse:71.9 nTPM
Allen mouse:7.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA064978Antibody CAB033965
Glial cells LowLow
Neuronal cells MediumMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

106.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 80.5
2481 Female, age 94, left hemisphere 99.8
2288 Male, age 75, left hemisphere 89.0
2290 Female, age 72, unknown 82.0
1857 Female, age 85, left hemisphere 80.2
2846 Female, age 79, unknown 74.7
1854 Male, age 80, left hemisphere 73.5
1781 Male, age 74, unknown 72.6
2289 Male, age 61, right hemisphere 71.8
Globus pallidus, externus
nTPM: 100.3
1996 Male, age 80, right hemisphere 118.6
2395 Male, age 75, both hemispheres 111.7
2772 Female, age 79, unknown 103.0
2646 Male, age 61, right hemisphere 91.0
2567 Female, age 72, unknown 77.3
Globus pallidus, internus
nTPM: 106.6
2287 Male, age 75, right hemisphere 128.0
2483 Female, age 94, right hemisphere 110.2
2778 Female, age 91, both hemispheres 109.1
2111 Female, age 85, right hemisphere 107.6
1818 Male, age 74, unknown 104.2
2037 Male, age 80, right hemisphere 102.1
2566 Female, age 72, unknown 84.8
Nucleus accumbens
nTPM: 83.3
2391 Female, age 94, left hemisphere 100.9
2286 Male, age 75, left hemisphere 96.0
1806 Female, age 85, left hemisphere 86.0
1783 Male, age 74, unknown 82.0
2698 Female, age 72, unknown 76.5
2732 Male, age 80, right hemisphere 76.4
2824 Male, age 61, right hemisphere 76.3
1856 Female, age 91, right hemisphere 72.5
Nucleus basalis of Meynert
nTPM: 81.7
2569 Male, age 61, both hemispheres 95.1
2484 Female, age 94, left hemisphere 82.4
2393 Male, age 80, right hemisphere 75.0
2821 Male, age 75, both hemispheres 74.4
Nucleus of the diagonal band
nTPM: 77.7
1812 Female, age 91, both hemispheres 97.6
2775 Male, age 80, right hemisphere 78.7
1979 Male, age 74, unknown 73.9
2029 Male, age 61, right hemisphere 72.9
2195 Female, age 85, both hemispheres 65.3
Putamen
nTPM: 76.3
2482 Female, age 94, left hemisphere 92.0
1829 Male, age 74, unknown 82.3
2466 Female, age 79, unknown 76.4
2647 Male, age 75, left hemisphere 76.1
1838 Male, age 80, right hemisphere 71.9
1937 Female, age 91, right hemisphere 69.7
2489 Female, age 72, unknown 65.5
Septal nuclei
nTPM: 76.2
2031 Female, age 72, unknown 88.3
2009 Female, age 91, both hemispheres 78.5
2199 Male, age 80, right hemisphere 77.8
2629 Female, age 94, right hemisphere 74.3
1960 Male, age 74, unknown 72.4
2394 Male, age 61, left hemisphere 71.7
2059 Female, age 85, both hemispheres 70.5
Stria terminalis, bed nucleus
nTPM: 70.7
1974 Female, age 91, both hemispheres 76.4
2201 Male, age 74, unknown 72.8
2486 Female, age 94, both hemispheres 62.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 53.1
Samples: 246

Max nTPM: 87.7
Min nTPM: 22.9
Std nTPM: 10.2
Median nTPM: 52.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 87.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 82.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 81.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 81.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 80.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 79.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 78.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 77.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 75.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 75.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 74.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 72.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 72.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 69.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 68.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 68.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 68.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 68.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 67.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 66.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 66.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 66.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 66.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 66.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 64.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 63.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 63.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 63.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 63.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 63.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 63.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 63.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 63.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 62.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 62.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 62.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 61.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 61.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 61.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 61.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 61.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 61.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 60.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 60.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 60.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 60.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 60.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 60.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 60.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 60.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 60.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 59.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 59.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 59.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 59.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 59.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 59.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 58.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 58.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 58.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 58.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 58.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 58.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 57.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 57.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 57.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 57.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 57.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 57.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 57.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 57.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 57.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 57.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 57.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 57.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 57.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 57.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 57.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 57.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 57.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 57.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 56.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 56.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 56.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 56.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 56.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 56.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 56.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 55.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 55.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 55.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 55.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 55.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 55.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 55.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 55.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 55.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 55.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 55.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 55.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 55.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 55.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 55.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 54.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 54.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 54.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 54.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 54.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 54.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 54.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 54.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 54.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 53.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 53.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 53.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 53.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 53.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 53.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 53.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 53.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 52.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 52.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 52.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 52.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 52.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 52.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 52.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 52.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 51.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 51.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 51.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 51.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 51.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 51.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 51.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 51.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 51.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 51.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 51.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 51.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 51.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 51.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 51.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 50.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 50.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 50.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 50.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 50.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 50.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 50.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 50.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 50.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 50.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 50.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 49.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 49.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 49.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 49.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 49.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 49.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 49.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 49.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 49.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 49.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 49.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 49.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 48.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 48.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 48.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 48.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 48.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 48.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 48.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 48.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 48.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 48.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 48.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 48.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 48.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 47.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 47.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 47.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 47.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 47.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 47.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 47.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 47.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 47.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 47.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 46.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 46.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 46.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 46.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 46.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 46.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 45.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 45.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 45.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 45.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 45.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 45.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 44.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 44.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 44.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 44.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 44.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 44.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 44.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 43.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 43.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 43.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 43.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 43.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 43.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 43.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 42.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 42.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 41.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 41.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 41.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 41.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 40.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 40.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 40.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 40.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 39.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 39.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 39.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 38.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 38.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 38.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 38.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 37.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 37.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 36.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 36.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 35.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 35.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 34.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 33.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 33.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 29.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 26.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 25.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 24.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 22.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 49.2
Samples: 246

Max nTPM: 75.8
Min nTPM: 10.7
Std nTPM: 12.7
Median nTPM: 50.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 75.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 75.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 75.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 74.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 74.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 74.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 74.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 70.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 70.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 70.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 69.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 69.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 69.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 68.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 68.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 67.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 67.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 67.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 66.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 66.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 66.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 65.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 64.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 64.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 64.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 64.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 64.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 64.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 64.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 64.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 63.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 62.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 62.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 62.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 62.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 62.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 62.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 61.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 61.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 61.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 61.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 61.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 61.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 60.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 60.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 60.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 60.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 59.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 59.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 59.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 59.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 59.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 59.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 58.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 58.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 58.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 58.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 58.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 58.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 58.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 58.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 57.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 57.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 57.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 57.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 57.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 57.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 57.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 57.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 57.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 56.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 56.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 56.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 56.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 56.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 56.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 56.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 56.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 56.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 56.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 56.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 56.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 55.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 55.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 55.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 55.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 55.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 55.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 55.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 55.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 55.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 55.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 54.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 54.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 54.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 54.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 54.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 54.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 54.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 53.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 53.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 53.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 53.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 53.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 52.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 52.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 52.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 52.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 51.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 51.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 51.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 51.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 51.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 51.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 51.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 51.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 50.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 50.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 50.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 50.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 50.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 50.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 50.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 50.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 50.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 49.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 49.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 49.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 49.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 49.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 48.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 48.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 48.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 48.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 48.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 48.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 48.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 47.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 47.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 47.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 47.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 47.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 47.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 47.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 46.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 46.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 46.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 46.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 46.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 46.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 45.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 45.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 45.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 45.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 45.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 45.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 45.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 44.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 44.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 44.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 44.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 44.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 44.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 44.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 43.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 43.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 43.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 43.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 43.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 43.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 43.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 43.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 43.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 43.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 42.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 42.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 42.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 42.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 41.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 41.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 41.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 41.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 41.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 41.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 41.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 40.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 40.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 40.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 40.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 40.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 40.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 40.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 40.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 39.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 39.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 39.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 38.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 38.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 38.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 38.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 37.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 37.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 37.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 37.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 37.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 36.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 36.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 36.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 36.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 36.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 36.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 35.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 35.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 34.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 34.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 34.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 34.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 34.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 34.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 33.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 33.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 33.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 32.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 32.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 32.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 31.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 30.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 30.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 29.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 28.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 28.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 27.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 27.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 26.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 26.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 25.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 22.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 21.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 20.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 19.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 19.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 19.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 18.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 16.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 12.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 10.7
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Brain - Putamen (basal ganglia)
Average nTPM: 53.0
Samples: 205

Max nTPM: 92.5
Min nTPM: 23.0
Std nTPM: 10.4
Median nTPM: 53.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 92.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 85.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 80.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 79.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 76.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 75.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 71.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 70.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 69.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 68.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 68.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 67.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 67.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 66.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 66.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 66.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 66.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 65.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 65.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 64.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 64.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 64.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 63.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 63.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 63.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 63.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 62.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 62.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 62.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 62.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 62.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 62.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 62.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 62.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 61.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 61.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 61.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 61.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 61.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 61.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 61.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 61.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 60.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 60.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 60.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 60.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 60.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 59.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 59.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 59.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 59.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 59.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 59.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 59.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 58.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 58.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 58.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 58.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 57.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 57.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 57.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 57.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 57.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 56.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 56.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 56.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 56.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 56.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 56.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 56.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 55.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 55.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 55.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 55.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 55.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 55.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 55.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 55.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 55.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 55.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 55.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 55.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 55.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 55.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 55.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 55.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 55.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 54.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 54.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 54.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 54.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 54.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 54.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 54.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 54.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 54.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 54.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 54.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 54.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 54.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 54.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 54.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 53.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 53.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 53.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 53.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 53.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 53.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 53.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 52.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 52.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 52.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 52.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 52.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 52.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 52.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 51.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 51.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 51.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 51.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 50.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 50.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 50.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 50.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 50.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 50.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 50.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 50.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 50.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 50.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 50.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 49.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 49.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 49.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 49.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 49.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 49.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 49.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 49.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 49.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 49.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 49.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 48.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 48.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 48.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 48.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 48.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 48.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 47.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 47.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 47.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 47.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 47.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 47.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 46.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 46.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 46.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 46.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 46.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 46.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 46.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 46.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 45.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 45.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 44.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 44.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 44.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 44.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 44.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 44.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 43.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 43.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 43.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 43.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 42.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 42.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 41.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 41.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 41.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 41.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 41.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 41.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 41.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 40.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 40.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 39.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 39.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 39.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 39.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 38.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 37.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 37.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 36.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 36.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 34.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 33.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 33.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 32.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 32.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 31.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 28.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 28.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 28.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 26.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 23.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

72.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 52.4
FF:10164-103B2 76 years, female 52.4
Nucleus accumbens
Scaled Tags Per Million: 60.7
FF:10037-101F1 23-56 years, mixed 60.7
Putamen
Scaled Tags Per Million: 53.0
FF:10176-103C5 60 years, female 53.0
Globus pallidus
Scaled Tags Per Million: 72.9
FF:10161-103A8 76 years, female 85.4
FF:10175-103C4 60 years, female 60.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.7
Pig sample Sample description nTPM
Caudate
nTPM: 29.6
Samples: 4

Max nTPM: 34.6
Min nTPM: 26.2
Sample A Female 26.2
Sample B Female 29.5
Sample C Male 34.6
Sample D Male 28.0
Putamen
nTPM: 31.7
Samples: 4

Max nTPM: 39.1
Min nTPM: 26.6
Sample A Female 30.0
Sample B Female 26.6
Sample C Male 39.1
Sample D Male 31.1
Septum
nTPM: 30.9
Samples: 4

Max nTPM: 34.3
Min nTPM: 28.0
Sample A Female 32.3
Sample B Female 29.1
Sample C Male 34.3
Sample D Male 28.0
Ventral pallidum
nTPM: 31.4
Samples: 4

Max nTPM: 36.3
Min nTPM: 29.5
Sample A Female 29.9
Sample B Female 29.5
Sample C Male 36.3
Sample D Male 30.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 65.1
Samples: 4

Max nTPM: 70.8
Min nTPM: 58.2
Sample A Male 61.2
Sample B Male 58.2
Sample C Female 70.3
Sample D Female 70.8
Septum
nTPM: 71.9
Samples: 4

Max nTPM: 74.2
Min nTPM: 69.7
Sample A Male 74.2
Sample B Male 72.0
Sample C Female 69.7
Sample D Female 71.6
Ventral forebrain
nTPM: 69.4
Samples: 4

Max nTPM: 71.6
Min nTPM: 65.7
Sample A Male 71.6
Sample B Male 68.9
Sample C Female 65.7
Sample D Female 71.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 6.3
74800953 Antisense, RP_060315_02_A10, Mouse strain C57BL/6J (56 days, male) 7.6
68193038 Antisense, RP_040825_01_H05, Mouse strain C57BL/6J (56 days, male) 4.9
Pallidum
Expression energy: 7.3
74800953 Antisense, RP_060315_02_A10, Mouse strain C57BL/6J (56 days, male) 10.1
68193038 Antisense, RP_040825_01_H05, Mouse strain C57BL/6J (56 days, male) 4.5

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