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PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

HAL
Synonyms HIS
Gene descriptioni

Full gene name according to HGNC.

Histidine ammonia-lyase
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Enzymes
Human disease related genes
Metabolic proteins
Plasma proteins
Potential drug targets
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 12
Cytoband q23.1
Chromosome location (bp) 95972662 - 95996365
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000084110 (version 109)
Entrez gene 3034
HGNC HGNC:4806
UniProt P42357 (UniProt - Evidence at protein level)
neXtProt NX_P42357
GeneCards HAL
Antibodypedia HAL antibodies


PROTEIN FUNCTION
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Lyase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Histidine metabolism
Gene summary (Entrez)i

Useful information about the gene from Entrez

Histidine ammonia-lyase is a cytosolic enzyme catalyzing the first reaction in histidine catabolism, the nonoxidative deamination of L-histidine to trans-urocanic acid. Histidine ammonia-lyase defects cause histidinemia which is characterized by increased histidine and histamine and decreased urocanic acid in body fluids. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Apr 2012]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
HAL-201
ENSP00000261208
ENST00000261208
P42357
[Direct mapping] Histidine ammonia-lyase
Show all
Enzymes
   ENZYME proteins
   Lyases
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of amino acid metabolism
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003824 [catalytic activity]
GO:0004397 [histidine ammonia-lyase activity]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006547 [histidine metabolic process]
GO:0006548 [histidine catabolic process]
GO:0016829 [lyase activity]
GO:0016841 [ammonia-lyase activity]
GO:0019556 [histidine catabolic process to glutamate and formamide]
GO:0019557 [histidine catabolic process to glutamate and formate]
Show all
657 aa
72.7 kDa
No 0
HAL-202
ENSP00000440861
ENST00000538703
P42357
[Direct mapping] Histidine ammonia-lyase
Show all
Enzymes
   ENZYME proteins
   Lyases
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of amino acid metabolism
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003824 [catalytic activity]
GO:0004397 [histidine ammonia-lyase activity]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006547 [histidine metabolic process]
GO:0006548 [histidine catabolic process]
GO:0016829 [lyase activity]
GO:0016841 [ammonia-lyase activity]
GO:0019556 [histidine catabolic process to glutamate and formamide]
GO:0019557 [histidine catabolic process to glutamate and formate]
Show all
591 aa
64.9 kDa
No 0
HAL-203
ENSP00000446364
ENST00000541929
P42357
[Direct mapping] Histidine ammonia-lyase
Show all
Enzymes
   ENZYME proteins
   Lyases
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of amino acid metabolism
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003824 [catalytic activity]
GO:0004397 [histidine ammonia-lyase activity]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006547 [histidine metabolic process]
GO:0006548 [histidine catabolic process]
GO:0016829 [lyase activity]
GO:0016841 [ammonia-lyase activity]
GO:0019556 [histidine catabolic process to glutamate and formamide]
GO:0019557 [histidine catabolic process to glutamate and formate]
Show all
449 aa
49.1 kDa
No 0
HAL-205
ENSP00000447543
ENST00000546579
F8W0V1
[Direct mapping] Histidine ammonia-lyase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of amino acid metabolism
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003824 [catalytic activity]
Show all
157 aa
17.7 kDa
No 0
HAL-208
ENSP00000446678
ENST00000548808
H0YHB0
[Direct mapping] Histidine ammonia-lyase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of amino acid metabolism
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003824 [catalytic activity]
Show all
154 aa
16.8 kDa
No 0
HAL-211
ENSP00000450372
ENST00000552509
F8VNX0
[Direct mapping] Histidine ammonia-lyase
Show all
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of amino acid metabolism
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003824 [catalytic activity]
GO:0016841 [ammonia-lyase activity]
Show all
336 aa
37.1 kDa
No 0

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