HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:10.2 nTPM
HPA Brain:46.8 nTPM
GTEx:10.2 nTPM
FANTOM5:42.3 Scaled Tags Per Million
Pig:46.4 nTPM
Mouse:114.6 nTPM
Allen mouse:13.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010850
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 46.8
Sample id Sample description nTPM
Hippocampus
nTPM: 33.2
1898 Male, age 80, left hemisphere 50.6
2621 Female, age 67, right hemisphere 32.4
1855 Male, age 76, left hemisphere 32.3
1911 Female, age 85, right hemisphere 30.5
2148 Female, age 91, left hemisphere 29.4
2529 Female, age 94, left hemisphere 24.2
Dentate gyrus
nTPM: 32.9
1927 Female, age 91, both hemispheres 46.1
2010 Male, age 76, both hemispheres 37.6
2246 Female, age 85, both hemispheres 31.2
2530 Female, age 94, left hemisphere 28.8
2528 Male, age 74, both hemispheres 27.2
2531 Female, age 67, both hemispheres 26.2
Entorhinal gyrus
nTPM: 43.5
2613 Female, age 94, left hemisphere 65.5
1938 Female, age 85, left hemisphere 49.7
2764 Male, age 80, right hemisphere 47.9
1787 Male, age 76, left hemisphere 38.8
2686 Male, age 75, right hemisphere 32.4
2117 Female, age 91, right hemisphere 26.4
Hippocampus, CA1
nTPM: 46.8
2749 Male, age 80, left hemisphere 103.3
2527 Male, age 74, both hemispheres 34.6
1873 Female, age 85, both hemispheres 34.5
2045 Male, age 76, both hemispheres 33.4
2082 Female, age 91, right hemisphere 28.0
Hippocampus, CA2
nTPM: 38.1
1963 Male, age 80, left hemisphere 53.9
1892 Male, age 76, both hemispheres 53.6
2249 Male, age 74, both hemispheres 32.4
2437 Female, age 94, left hemisphere 30.5
1940 Female, age 85, left hemisphere 29.4
2113 Female, age 91, right hemisphere 28.7
Hippocampus, CA3
nTPM: 44.3
2137 Male, age 80, left hemisphere 87.9
1867 Male, age 76, both hemispheres 42.9
2620 Female, age 94, left hemisphere 40.5
1891 Female, age 85, both hemispheres 34.0
2436 Male, age 74, both hemispheres 33.0
2861 Female, age 67, both hemispheres 27.4
Parahippocampal cortex
nTPM: 38.5
1990 Female, age 91, right hemisphere 49.3
1850 Male, age 80, both hemispheres 49.2
2693 Female, age 94, both hemispheres 41.9
2250 Female, age 67, right hemisphere 39.7
1933 Female, age 85, both hemispheres 38.7
2245 Female, age 91, both hemispheres 38.6
2532 Female, age 72, left hemisphere 35.2
2692 Male, age 74, both hemispheres 34.5
2622 Female, age 67, right hemisphere 30.4
2018 Male, age 76, both hemispheres 27.8
Perirhinal gyrus
nTPM: 46.3
1847 Female, age 91, left hemisphere 60.2
1841 Female, age 85, right hemisphere 44.4
1794 Male, age 80, right hemisphere 44.2
2521 Female, age 94, right hemisphere 42.4
2848 Male, age 76, right hemisphere 40.1
Subiculum
nTPM: 34.7
1901 Male, age 80, both hemispheres 54.1
1977 Female, age 85, both hemispheres 41.0
2438 Female, age 94, left hemisphere 29.8
2042 Male, age 76, both hemispheres 29.7
2619 Male, age 74, both hemispheres 29.7
2729 Female, age 91, right hemisphere 24.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 10.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.2
Samples: 197

Max nTPM: 29.2
Min nTPM: 2.5
Std nTPM: 6.0
Median nTPM: 8.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 29.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 28.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 28.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 25.5
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 25.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 23.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 23.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 22.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 22.5
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 22.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 22.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 42.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.3
FF:10169-103B7 60 years, female 50.8
FF:10153-102I9 76 years, female 33.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 46.4
Pig sample Sample description nTPM
Subiculum
nTPM: 36.8
Samples: 4

Max nTPM: 44.7
Min nTPM: 30.5
Sample A Female 44.7
Sample B Female 34.5
Sample C Male 37.4
Sample D Male 30.5
Dorsal hippocampus
nTPM: 37.4
Samples: 4

Max nTPM: 44.8
Min nTPM: 30.1
Sample A Female 43.7
Sample B Female 44.8
Sample C Male 30.1
Sample D Male 30.8
Entorhinal cortex
nTPM: 46.5
Samples: 4

Max nTPM: 48.6
Min nTPM: 43.4
Sample A Female 48.6
Sample B Female 47.6
Sample C Male 46.2
Sample D Male 43.4
Ventral hippocampus
nTPM: 37.6
Samples: 4

Max nTPM: 44.7
Min nTPM: 26.0
Sample A Female 37.7
Sample B Female 26.0
Sample C Male 44.7
Sample D Male 42.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 114.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 114.6
Samples: 4

Max nTPM: 122.4
Min nTPM: 103.9
Sample A Male 122.4
Sample B Male 117.2
Sample C Female 103.9
Sample D Female 115.0
Hippocampal formation
nTPM: 107.9
Samples: 4

Max nTPM: 125.7
Min nTPM: 92.6
Sample A Male 92.6
Sample B Male 115.0
Sample C Female 125.7
Sample D Female 98.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 13.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.7
69446286 Antisense, RP_050419_01_C10, Mouse strain C57BL/6J (56 days, male) 13.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org