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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:96.2 nTPM
FANTOM5:354.6 Scaled Tags Per Million
Pig:244.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001306Antibody CAB033665
Glial cells Not detectedLow
Neuronal cells MediumHigh





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

96.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 96.2
Samples: 246

Max nTPM: 540.0
Min nTPM: 47.8
Std nTPM: 55.5
Median nTPM: 80.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 540.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 456.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 330.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 328.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 271.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 268.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 241.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 230.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 225.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 209.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 207.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 203.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 193.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 183.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 175.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 171.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 155.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 150.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 150.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 149.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 148.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 147.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 143.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 141.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 141.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 141.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 132.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 132.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 131.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 130.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 123.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 121.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 119.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 117.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 115.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 115.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 114.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 111.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 110.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 109.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 108.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 108.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 108.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 108.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 108.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 107.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 107.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 107.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 106.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 105.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 105.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 104.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 104.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 103.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 103.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 102.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 102.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 102.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 102.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 101.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 101.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 101.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 101.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 100.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 99.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 99.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 99.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 99.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 98.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 98.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 98.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 98.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 97.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 97.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 96.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 96.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 96.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 95.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 94.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 94.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 94.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 93.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 93.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 93.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 92.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 92.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 92.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 92.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 91.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 91.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 90.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 89.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 89.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 89.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 89.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 88.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 88.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 87.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 87.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 87.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 86.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 86.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 85.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 85.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 85.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 85.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 84.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 83.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 83.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 83.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 82.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 82.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 82.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 82.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 82.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 82.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 82.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 82.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 81.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 81.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 81.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 81.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 80.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 80.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 80.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 80.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 80.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 79.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 79.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 79.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 79.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 79.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 79.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 79.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 78.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 78.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 78.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 78.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 78.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 78.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 78.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 78.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 77.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 77.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 77.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 77.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 77.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 76.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 76.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 76.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 76.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 75.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 75.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 75.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 75.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 75.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 75.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 75.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 75.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 74.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 74.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 74.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 74.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 74.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 73.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 73.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 73.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 73.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 73.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 72.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 72.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 71.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 71.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 71.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 71.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 71.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 70.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 70.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 69.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 69.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 69.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 69.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 69.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 68.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 68.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 68.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 68.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 68.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 68.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 67.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 67.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 67.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 67.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 67.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 67.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 66.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 66.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 66.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 66.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 66.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 66.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 65.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 65.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 65.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 65.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 64.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 64.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 64.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 64.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 64.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 64.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 64.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 63.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 63.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 63.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 63.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 63.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 63.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 62.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 62.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 62.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 62.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 61.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 61.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 61.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 61.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 61.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 61.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 61.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 60.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 60.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 59.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 58.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 58.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 58.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 57.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 57.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 57.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 57.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 56.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 56.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 55.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 54.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 52.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 49.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 47.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

354.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 354.6
FF:10164-103B2 76 years, female 354.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

244.5
Pig sample Sample description nTPM
Caudate
nTPM: 244.5
Samples: 4

Max nTPM: 264.9
Min nTPM: 220.5
Sample A Female 254.7
Sample B Female 220.5
Sample C Male 264.9
Sample D Male 237.9

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