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B4GALT1
HPA
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  • B4GALT1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

B4GALT1
Synonyms beta4Gal-T1, GGTB2
Gene descriptioni

Full gene name according to HGNC.

Beta-1,4-galactosyltransferase 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Enzymes
Human disease related genes
Metabolic proteins
Plasma proteins
Potential drug targets
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 9
Cytoband p21.1
Chromosome location (bp) 33104082 - 33167356
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

2
Ensembl ENSG00000086062 (version 109)
Entrez gene 2683
HGNC HGNC:924
UniProt P15291 (UniProt - Evidence at protein level)
neXtProt NX_P15291
GeneCards B4GALT1
Antibodypedia B4GALT1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

[Beta-1,4-galactosyltransferase 1]: The Golgi complex form catalyzes the production of lactose in the lactating mammary gland and could also be responsible for the synthesis of complex-type N-linked oligosaccharides in many glycoproteins as well as the carbohydrate moieties of glycolipids.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Glycosyltransferase, Transferase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Lipid metabolism
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Manganese, Metal-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene is one of seven beta-1,4-galactosyltransferase (beta4GalT) genes. They encode type II membrane-bound glycoproteins that appear to have exclusive specificity for the donor substrate UDP-galactose; all transfer galactose in a beta1,4 linkage to similar acceptor sugars: GlcNAc, Glc, and Xyl. Each beta4GalT has a distinct function in the biosynthesis of different glycoconjugates and saccharide structures. As type II membrane proteins, they have an N-terminal hydrophobic signal sequence that directs the protein to the Golgi apparatus and which then remains uncleaved to function as a transmembrane anchor. By sequence similarity, the beta4GalTs form four groups: beta4GalT1 and beta4GalT2, beta4GalT3 and beta4GalT4, beta4GalT5 and beta4GalT6, and beta4GalT7. This gene is unique among the beta4GalT genes because it encodes an enzyme that participates both in glycoconjugate and lactose biosynthesis. For the first activity, the enzyme adds galactose to N-acetylglucosamine residues that are either monosaccharides or the nonreducing ends of glycoprotein carbohydrate chains. The second activity is restricted to lactating mammary tissues where the enzyme forms a heterodimer with alpha-lactalbumin to catalyze UDP-galactose + D-glucose <=> UDP + lactose. The two enzymatic forms result from alternate transcription initiation sites and post-translational processing. Two transcripts, which differ only at the 5' end, with approximate lengths of 4.1 kb and 3.9 kb encode the same protein. The longer transcript encodes the type II membrane-bound, trans-Golgi resident protein involved in glycoconjugate biosynthesis. The shorter transcript encodes a protein which is cleaved to form the soluble lactose synthase. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
B4GALT1-201
ENSP00000369055
ENST00000379731
P15291
[Direct mapping] Beta-1,4-galactosyltransferase 1 Processed beta-1,4-galactosyltransferase 1
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of glycan/glycoprotein metabolism
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000138 [Golgi trans cisterna]
GO:0000139 [Golgi membrane]
GO:0002064 [epithelial cell development]
GO:0002526 [acute inflammatory response]
GO:0003831 [beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity]
GO:0003945 [N-acetyllactosamine synthase activity]
GO:0004461 [lactose synthase activity]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0005794 [Golgi apparatus]
GO:0005886 [plasma membrane]
GO:0005975 [carbohydrate metabolic process]
GO:0005989 [lactose biosynthetic process]
GO:0006012 [galactose metabolic process]
GO:0006486 [protein glycosylation]
GO:0006487 [protein N-linked glycosylation]
GO:0006629 [lipid metabolic process]
GO:0007155 [cell adhesion]
GO:0007339 [binding of sperm to zona pellucida]
GO:0007341 [penetration of zona pellucida]
GO:0008092 [cytoskeletal protein binding]
GO:0008283 [cell population proliferation]
GO:0008378 [galactosyltransferase activity]
GO:0009101 [glycoprotein biosynthetic process]
GO:0009312 [oligosaccharide biosynthetic process]
GO:0009897 [external side of plasma membrane]
GO:0009986 [cell surface]
GO:0016020 [membrane]
GO:0016323 [basolateral plasma membrane]
GO:0016740 [transferase activity]
GO:0016757 [glycosyltransferase activity]
GO:0030057 [desmosome]
GO:0030145 [manganese ion binding]
GO:0030175 [filopodium]
GO:0030198 [extracellular matrix organization]
GO:0030667 [secretory granule membrane]
GO:0031526 [brush border membrane]
GO:0032580 [Golgi cisterna membrane]
GO:0032991 [protein-containing complex]
GO:0035250 [UDP-galactosyltransferase activity]
GO:0035577 [azurophil granule membrane]
GO:0042060 [wound healing]
GO:0042802 [identical protein binding]
GO:0042995 [cell projection]
GO:0043014 [alpha-tubulin binding]
GO:0043065 [positive regulation of apoptotic process]
GO:0045136 [development of secondary sexual characteristics]
GO:0046872 [metal ion binding]
GO:0048487 [beta-tubulin binding]
GO:0050673 [epithelial cell proliferation]
GO:0050680 [negative regulation of epithelial cell proliferation]
GO:0060046 [regulation of acrosome reaction]
GO:0060054 [positive regulation of epithelial cell proliferation involved in wound healing]
GO:0060055 [angiogenesis involved in wound healing]
GO:0070062 [extracellular exosome]
GO:0070085 [glycosylation]
GO:1905517 [macrophage migration]
Show all
398 aa
43.9 kDa
No 1
B4GALT1-202
ENSP00000440341
ENST00000535206
Q86XA6
[Direct mapping] B4GALT1 protein; Beta-1,4-galactosyltransferase 1
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of glycan/glycoprotein metabolism
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005794 [Golgi apparatus]
GO:0005975 [carbohydrate metabolic process]
GO:0016020 [membrane]
GO:0016757 [glycosyltransferase activity]
GO:0098588 [bounding membrane of organelle]
Show all
225 aa
24.3 kDa
No 1

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