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  • FOLH1
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:16.3 nTPM
HPA Brain:76.6 nTPM
GTEx:16.3 nTPM
FANTOM5:139.4 Scaled Tags Per Million
Pig:98.9 nTPM
Mouse:6.4 nTPM
Allen mouse:0.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA010593Antibody CAB001451
Glial cells LowNot detected
Neuronal cells Not detectedNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

76.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 31.5
2288 Male, age 75, left hemisphere 56.7
2290 Female, age 72, unknown 32.1
2846 Female, age 79, unknown 31.5
2289 Male, age 61, right hemisphere 30.8
2481 Female, age 94, left hemisphere 29.8
1854 Male, age 80, left hemisphere 27.1
1781 Male, age 74, unknown 24.8
1857 Female, age 85, left hemisphere 19.6
Globus pallidus, externus
nTPM: 67.2
1996 Male, age 80, right hemisphere 79.1
2646 Male, age 61, right hemisphere 69.0
2772 Female, age 79, unknown 68.0
2567 Female, age 72, unknown 61.1
2395 Male, age 75, both hemispheres 58.6
Globus pallidus, internus
nTPM: 76.6
2111 Female, age 85, right hemisphere 110.3
2778 Female, age 91, both hemispheres 82.7
2287 Male, age 75, right hemisphere 81.2
1818 Male, age 74, unknown 77.2
2566 Female, age 72, unknown 69.3
2037 Male, age 80, right hemisphere 64.4
2483 Female, age 94, right hemisphere 50.8
Nucleus accumbens
nTPM: 39.7
2391 Female, age 94, left hemisphere 70.8
2286 Male, age 75, left hemisphere 50.4
2698 Female, age 72, unknown 43.8
2732 Male, age 80, right hemisphere 43.8
1783 Male, age 74, unknown 30.7
2824 Male, age 61, right hemisphere 30.7
1806 Female, age 85, left hemisphere 29.1
1856 Female, age 91, right hemisphere 18.0
Nucleus basalis of Meynert
nTPM: 40.1
2569 Male, age 61, both hemispheres 49.6
2821 Male, age 75, both hemispheres 43.6
2393 Male, age 80, right hemisphere 34.3
2484 Female, age 94, left hemisphere 33.1
Nucleus of the diagonal band
nTPM: 17.9
1812 Female, age 91, both hemispheres 21.1
1979 Male, age 74, unknown 18.9
2029 Male, age 61, right hemisphere 17.0
2195 Female, age 85, both hemispheres 16.7
2775 Male, age 80, right hemisphere 15.8
Putamen
nTPM: 37.2
1829 Male, age 74, unknown 48.5
2482 Female, age 94, left hemisphere 42.6
2489 Female, age 72, unknown 39.7
2647 Male, age 75, left hemisphere 38.3
1937 Female, age 91, right hemisphere 36.6
2466 Female, age 79, unknown 29.2
1838 Male, age 80, right hemisphere 25.8
Septal nuclei
nTPM: 26.3
2394 Male, age 61, left hemisphere 53.3
2199 Male, age 80, right hemisphere 29.6
2059 Female, age 85, both hemispheres 25.8
2629 Female, age 94, right hemisphere 24.2
2009 Female, age 91, both hemispheres 20.1
2031 Female, age 72, unknown 16.6
1960 Male, age 74, unknown 14.6
Stria terminalis, bed nucleus
nTPM: 24.7
2201 Male, age 74, unknown 29.2
1974 Female, age 91, both hemispheres 26.2
2486 Female, age 94, both hemispheres 18.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 11.7
Samples: 246

Max nTPM: 48.1
Min nTPM: 1.3
Std nTPM: 7.0
Median nTPM: 10.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 48.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 35.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 33.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 32.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 30.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 30.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 30.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 30.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 29.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 29.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 29.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 28.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 27.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 26.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 24.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 24.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 24.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 23.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 23.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 23.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 23.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 22.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 21.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 21.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 19.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 19.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 18.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 18.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 18.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 18.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 17.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 17.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 17.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 17.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 17.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 17.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 17.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 17.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 17.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 17.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 16.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 16.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 16.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 16.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 16.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 16.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 16.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 16.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 16.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 16.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 16.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 16.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 15.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 15.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 15.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 15.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 15.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 15.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 15.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 15.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 14.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 14.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 14.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 14.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 14.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 14.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 14.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 14.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 14.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 14.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 14.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 14.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 13.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 13.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 13.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 13.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 13.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 13.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 13.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 13.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 13.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 13.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 13.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 13.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 13.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 12.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 12.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 12.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 12.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 12.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 12.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 12.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 12.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 12.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 12.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 12.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 12.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 12.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 12.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 12.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 12.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 12.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 12.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 11.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 11.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 11.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 11.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 11.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 11.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 11.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 11.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 11.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 10.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 10.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 10.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 10.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 10.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 10.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 10.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 10.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 10.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 10.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 10.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 10.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 10.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 9.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 9.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 9.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 9.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 9.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 9.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 9.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 9.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 9.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 9.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 9.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 9.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 9.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 9.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 9.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 9.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 8.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 8.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 8.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 8.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 8.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 8.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 8.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 8.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 8.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 8.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 8.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 8.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 8.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 8.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 7.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 7.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 7.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 7.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 7.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 7.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 7.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 7.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 7.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 7.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 7.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 7.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 7.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 7.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 7.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 7.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 7.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 7.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 7.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 7.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 7.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 7.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 7.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 7.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 6.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 6.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 6.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 6.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 6.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 6.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 6.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 6.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 6.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 6.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 6.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 6.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 6.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 6.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 6.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 6.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 6.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 5.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 5.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 5.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 5.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 5.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 5.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 5.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 5.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 5.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 5.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 5.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 5.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 5.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 5.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 5.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 5.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 5.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 5.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 5.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 5.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 5.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 4.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 4.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 4.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 4.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 4.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 4.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 4.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 4.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 4.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 4.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 4.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 4.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 4.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 4.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 4.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 3.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 3.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 3.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 3.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 3.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 3.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 3.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 3.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 2.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 2.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 2.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 2.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 2.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 7.7
Samples: 246

Max nTPM: 89.2
Min nTPM: 0.6
Std nTPM: 9.1
Median nTPM: 5.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 89.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 53.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 49.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 46.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 38.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 33.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 32.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 30.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 25.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 25.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 24.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 23.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 22.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 21.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 20.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 20.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 19.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 18.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 17.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 16.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 16.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 15.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 15.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 15.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 14.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 13.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 13.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 13.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 12.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 12.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 12.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 12.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 12.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 11.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 11.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 11.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 11.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 11.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 11.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 11.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 11.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 11.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 10.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 10.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 10.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 10.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 10.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 10.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 10.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 10.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 10.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 9.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 9.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 9.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 9.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 9.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 9.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 8.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 8.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 8.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 8.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 8.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 8.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 8.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 8.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 8.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 8.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 8.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 8.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 7.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 7.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 7.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 7.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 7.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 7.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 7.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 7.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 7.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 7.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 7.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 7.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 7.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 7.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 7.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 7.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 7.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 6.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 6.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 6.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 6.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 6.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 6.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 6.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 6.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 6.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 6.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 6.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 6.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 6.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 6.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 6.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 6.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 6.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 5.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 5.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 5.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 5.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 5.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 5.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 5.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 5.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 5.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 5.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 5.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 5.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 5.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 5.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 5.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 5.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 5.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 5.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 5.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 5.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 5.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 4.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 4.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 4.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 4.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 4.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 4.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 4.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 4.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 4.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 4.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 4.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 4.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 4.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 4.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 4.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 4.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 4.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 4.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 4.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 4.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 4.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 4.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 4.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 4.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 4.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 4.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 3.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 3.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 3.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 3.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 3.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 3.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 3.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 3.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 3.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 3.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 3.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 3.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 3.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 3.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 3.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 3.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 3.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 3.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 3.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 3.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 3.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 3.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 3.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 3.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 3.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 3.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 3.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 3.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 3.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 3.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 3.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 3.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 3.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 3.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 3.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 3.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 3.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 3.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 3.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 3.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 3.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 3.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 3.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 3.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 3.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 2.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 2.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 2.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 2.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 2.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 2.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 2.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 2.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 2.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 2.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 2.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 2.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 2.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 2.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 2.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 2.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 2.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 2.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 2.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 2.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 2.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 2.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 2.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 2.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 2.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 1.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 1.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 1.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 1.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 1.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 1.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 1.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 1.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 1.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 1.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 1.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 1.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 1.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 1.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 1.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 1.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 1.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 1.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 1.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 1.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 1.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 1.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 0.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 0.6
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Brain - Putamen (basal ganglia)
Average nTPM: 16.3
Samples: 205

Max nTPM: 57.7
Min nTPM: 2.6
Std nTPM: 8.6
Median nTPM: 14.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 57.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 50.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 43.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 40.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 39.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 39.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 35.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 35.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 34.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 31.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 30.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 30.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 30.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 30.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 29.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 29.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 28.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 28.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 28.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 28.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 27.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 27.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 27.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 26.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 26.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 25.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 25.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 25.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 24.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 24.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 23.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 23.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 23.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 22.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 22.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 22.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 22.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 22.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 22.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 22.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 21.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 21.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 21.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 21.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 21.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 21.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 21.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 20.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 20.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 20.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 20.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 20.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 20.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 20.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 20.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 20.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 20.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 20.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 19.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 19.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 19.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 19.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 19.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 19.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 19.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 18.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 18.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 18.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 18.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 18.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 18.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 18.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 18.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 18.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 18.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 17.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 17.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 17.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 17.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 17.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 17.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 17.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 17.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 17.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 16.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 16.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 16.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 16.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 16.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 16.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 16.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 16.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 15.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 15.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 15.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 15.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 15.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 15.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 15.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 15.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 15.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 14.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 14.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 14.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 14.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 14.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 14.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 14.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 14.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 14.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 14.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 14.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 14.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 14.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 14.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 14.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 13.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 13.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 13.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 13.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 13.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 13.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 12.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 12.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 12.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 12.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 12.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 12.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 12.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 12.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 12.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 12.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 12.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 12.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 11.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 11.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 11.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 11.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 11.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 11.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 11.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 11.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 10.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 10.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 10.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 10.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 10.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 10.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 10.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 10.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 10.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 10.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 10.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 9.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 9.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 9.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 9.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 9.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 9.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 9.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 9.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 9.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 8.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 8.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 8.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 8.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 8.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 8.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 8.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 8.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 8.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 8.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 8.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 8.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 7.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 7.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 7.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 7.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 7.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 7.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 7.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 7.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 7.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 7.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 7.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 7.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 7.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 6.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 6.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 6.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 6.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 6.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 6.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 5.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 5.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 5.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 4.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 4.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 4.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 3.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 3.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 3.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 3.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 2.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 2.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

139.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 24.5
FF:10164-103B2 76 years, female 24.5
Nucleus accumbens
Scaled Tags Per Million: 76.9
FF:10037-101F1 23-56 years, mixed 76.9
Putamen
Scaled Tags Per Million: 29.5
FF:10176-103C5 60 years, female 29.5
Globus pallidus
Scaled Tags Per Million: 139.4
FF:10175-103C4 60 years, female 192.2
FF:10161-103A8 76 years, female 86.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

98.9
Pig sample Sample description nTPM
Caudate
nTPM: 74.2
Samples: 4

Max nTPM: 84.0
Min nTPM: 65.9
Sample A Female 65.9
Sample B Female 73.9
Sample C Male 84.0
Sample D Male 73.0
Putamen
nTPM: 98.9
Samples: 4

Max nTPM: 127.1
Min nTPM: 72.0
Sample A Female 127.1
Sample B Female 72.0
Sample C Male 86.8
Sample D Male 109.8
Septum
nTPM: 85.4
Samples: 4

Max nTPM: 110.7
Min nTPM: 64.8
Sample A Female 80.5
Sample B Female 85.6
Sample C Male 64.8
Sample D Male 110.7
Ventral pallidum
nTPM: 94.6
Samples: 4

Max nTPM: 126.0
Min nTPM: 76.7
Sample A Female 76.7
Sample B Female 86.4
Sample C Male 89.4
Sample D Male 126.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 4.7
Samples: 4

Max nTPM: 5.2
Min nTPM: 3.8
Sample A Male 4.9
Sample B Male 3.8
Sample C Female 5.0
Sample D Female 5.2
Septum
nTPM: 6.3
Samples: 4

Max nTPM: 6.7
Min nTPM: 6.0
Sample A Male 6.0
Sample B Male 6.0
Sample C Female 6.7
Sample D Female 6.6
Ventral forebrain
nTPM: 5.2
Samples: 4

Max nTPM: 5.7
Min nTPM: 4.6
Sample A Male 4.6
Sample B Male 5.1
Sample C Female 5.7
Sample D Female 5.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
73512554 Antisense, RP_050915_01_A04, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
73512554 Antisense, RP_050915_01_A04, Mouse strain C57BL/6J (56 days, male) 0.0

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