HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:45.2 nTPM
HPA Brain:58.3 nTPM
GTEx:45.2 nTPM
FANTOM5:42.1 Scaled Tags Per Million
Pig:30.5 nTPM
Mouse:69.1 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034845
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 58.3
Sample id Sample description nTPM
Hippocampus
nTPM: 58.0
1911 Female, age 85, right hemisphere 62.4
1898 Male, age 80, left hemisphere 61.1
1855 Male, age 76, left hemisphere 60.2
2529 Female, age 94, left hemisphere 56.6
2621 Female, age 67, right hemisphere 55.6
2148 Female, age 91, left hemisphere 52.1
Dentate gyrus
nTPM: 53.2
2010 Male, age 76, both hemispheres 62.2
1927 Female, age 91, both hemispheres 60.2
2246 Female, age 85, both hemispheres 58.3
2528 Male, age 74, both hemispheres 49.9
2530 Female, age 94, left hemisphere 48.4
2531 Female, age 67, both hemispheres 40.0
Entorhinal gyrus
nTPM: 38.7
2117 Female, age 91, right hemisphere 46.1
1938 Female, age 85, left hemisphere 45.3
1787 Male, age 76, left hemisphere 44.2
2686 Male, age 75, right hemisphere 38.1
2764 Male, age 80, right hemisphere 31.2
2613 Female, age 94, left hemisphere 27.2
Hippocampus, CA1
nTPM: 58.3
2749 Male, age 80, left hemisphere 66.6
2045 Male, age 76, both hemispheres 66.1
1873 Female, age 85, both hemispheres 61.6
2527 Male, age 74, both hemispheres 52.6
2082 Female, age 91, right hemisphere 44.4
Hippocampus, CA2
nTPM: 53.6
1963 Male, age 80, left hemisphere 61.7
2249 Male, age 74, both hemispheres 57.7
1940 Female, age 85, left hemisphere 55.4
1892 Male, age 76, both hemispheres 55.0
2113 Female, age 91, right hemisphere 47.1
2437 Female, age 94, left hemisphere 44.7
Hippocampus, CA3
nTPM: 53.6
1867 Male, age 76, both hemispheres 60.7
2137 Male, age 80, left hemisphere 58.3
2436 Male, age 74, both hemispheres 56.7
1891 Female, age 85, both hemispheres 55.6
2620 Female, age 94, left hemisphere 48.6
2861 Female, age 67, both hemispheres 41.5
Parahippocampal cortex
nTPM: 43.8
2018 Male, age 76, both hemispheres 60.2
2250 Female, age 67, right hemisphere 47.3
2245 Female, age 91, both hemispheres 46.7
1933 Female, age 85, both hemispheres 45.0
2693 Female, age 94, both hemispheres 42.7
1990 Female, age 91, right hemisphere 41.1
2692 Male, age 74, both hemispheres 40.7
1850 Male, age 80, both hemispheres 39.7
2532 Female, age 72, left hemisphere 38.8
2622 Female, age 67, right hemisphere 35.3
Perirhinal gyrus
nTPM: 41.0
2521 Female, age 94, right hemisphere 44.2
1847 Female, age 91, left hemisphere 43.7
1841 Female, age 85, right hemisphere 41.0
1794 Male, age 80, right hemisphere 38.3
2848 Male, age 76, right hemisphere 38.1
Subiculum
nTPM: 49.6
2042 Male, age 76, both hemispheres 60.5
2438 Female, age 94, left hemisphere 53.6
2729 Female, age 91, right hemisphere 53.5
1901 Male, age 80, both hemispheres 48.4
1977 Female, age 85, both hemispheres 41.7
2619 Male, age 74, both hemispheres 39.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 45.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.2
Samples: 197

Max nTPM: 77.2
Min nTPM: 27.7
Std nTPM: 10.1
Median nTPM: 44.0
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 77.2
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 75.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 75.2
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 71.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 69.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 69.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 67.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 67.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 66.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 65.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 65.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 42.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.1
FF:10169-103B7 60 years, female 44.6
FF:10153-102I9 76 years, female 39.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 30.5
Pig sample Sample description nTPM
Subiculum
nTPM: 27.7
Samples: 4

Max nTPM: 33.3
Min nTPM: 22.9
Sample A Female 33.3
Sample B Female 24.8
Sample C Male 22.9
Sample D Male 29.9
Dorsal hippocampus
nTPM: 30.5
Samples: 4

Max nTPM: 40.1
Min nTPM: 24.5
Sample A Female 40.1
Sample B Female 30.5
Sample C Male 24.5
Sample D Male 27.0
Entorhinal cortex
nTPM: 26.6
Samples: 4

Max nTPM: 32.2
Min nTPM: 20.1
Sample A Female 26.3
Sample B Female 32.2
Sample C Male 27.7
Sample D Male 20.1
Ventral hippocampus
nTPM: 25.3
Samples: 4

Max nTPM: 27.4
Min nTPM: 23.8
Sample A Female 27.4
Sample B Female 23.8
Sample C Male 25.0
Sample D Male 25.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 69.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.9
Samples: 4

Max nTPM: 61.6
Min nTPM: 54.4
Sample A Male 61.6
Sample B Male 60.2
Sample C Female 59.5
Sample D Female 54.4
Hippocampal formation
nTPM: 69.1
Samples: 4

Max nTPM: 77.1
Min nTPM: 64.2
Sample A Male 77.1
Sample B Male 69.9
Sample C Female 65.1
Sample D Female 64.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
68269634 Antisense, RP_041129_01_H11, Mouse strain C57BL/6J (56 days, male) 1.5

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