We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PGS1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • PGS1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PGS1
Synonyms DKFZP762M186
Gene descriptioni

Full gene name according to HGNC.

Phosphatidylglycerophosphate synthase 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Metabolic proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 17
Cytoband q25.3
Chromosome location (bp) 78378649 - 78425114
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000087157 (version 109)
Entrez gene 9489
HGNC HGNC:30029
UniProt Q32NB8 (UniProt - Evidence at transcript level)
neXtProt NX_Q32NB8
GeneCards PGS1
Antibodypedia PGS1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Functions in the biosynthesis of the anionic phospholipids phosphatidylglycerol and cardiolipin.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Transferase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Lipid biosynthesis, Lipid metabolism, Phospholipid biosynthesis, Phospholipid metabolism
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

ATP-binding, Nucleotide-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to enable CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity and calcium ion binding activity. Predicted to be involved in cardiolipin biosynthetic process and diacylglycerol metabolic process. Located in endoplasmic reticulum. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PGS1-201
ENSP00000262764
ENST00000262764
Q32NB8
[Direct mapping] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial
Show all
A0A024R8V5
[Target identity:100%; Query identity:100%] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
   Phobius predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003824 [catalytic activity]
GO:0005509 [calcium ion binding]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0005783 [endoplasmic reticulum]
GO:0006629 [lipid metabolic process]
GO:0006655 [phosphatidylglycerol biosynthetic process]
GO:0008444 [CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity]
GO:0008654 [phospholipid biosynthetic process]
GO:0016740 [transferase activity]
GO:0032049 [cardiolipin biosynthetic process]
GO:0043229 [intracellular organelle]
GO:0046339 [diacylglycerol metabolic process]
Show all
556 aa
62.7 kDa
No 0
PGS1-203
ENSP00000467569
ENST00000586019
K7EPX0
[Direct mapping] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0005524 [ATP binding]
GO:0005739 [mitochondrion]
GO:0006629 [lipid metabolic process]
GO:0006655 [phosphatidylglycerol biosynthetic process]
GO:0008444 [CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity]
GO:0008654 [phospholipid biosynthetic process]
GO:0016740 [transferase activity]
GO:0032049 [cardiolipin biosynthetic process]
Show all
132 aa
14.5 kDa
No 0
PGS1-205
ENSP00000467719
ENST00000586355
K7EQ89
[Direct mapping] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
114 aa
11.4 kDa
No 0
PGS1-208
ENSP00000465266
ENST00000587356
K7EJP6
[Direct mapping] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0005524 [ATP binding]
GO:0005739 [mitochondrion]
GO:0006629 [lipid metabolic process]
GO:0006655 [phosphatidylglycerol biosynthetic process]
GO:0008444 [CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity]
GO:0008654 [phospholipid biosynthetic process]
GO:0016740 [transferase activity]
GO:0032049 [cardiolipin biosynthetic process]
Show all
264 aa
29.6 kDa
No 0
PGS1-213
ENSP00000465908
ENST00000589689
K7EL44
[Direct mapping] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003824 [catalytic activity]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0006629 [lipid metabolic process]
GO:0006655 [phosphatidylglycerol biosynthetic process]
GO:0008444 [CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity]
GO:0008654 [phospholipid biosynthetic process]
GO:0016740 [transferase activity]
GO:0032049 [cardiolipin biosynthetic process]
GO:0043229 [intracellular organelle]
Show all
384 aa
43.3 kDa
No 0
PGS1-215
ENSP00000466219
ENST00000592043
K7ELT9
[Direct mapping] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003824 [catalytic activity]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0006629 [lipid metabolic process]
GO:0006655 [phosphatidylglycerol biosynthetic process]
GO:0008444 [CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity]
GO:0008654 [phospholipid biosynthetic process]
GO:0016740 [transferase activity]
GO:0032049 [cardiolipin biosynthetic process]
GO:0043229 [intracellular organelle]
Show all
329 aa
36.9 kDa
No 0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org