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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
262.8
nTPM
GTEx:
262.8
nTPM
FANTOM5:
118.9
Scaled Tags Per Million
Pig:
111.3
nTPM
Mouse:
246.7
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
262.8
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 262.8
Samples: 105
Max nTPM: 414.7
Min nTPM: 107.5
Std nTPM: 74.7
Median nTPM:
163_1
78 years, male
414.7
352_1
62 years, male
408.1
425_1
59 years, female
399.9
246_1
77 years, male
388.6
319_1
81 years, male
386.9
237_1
82 years, male
385.1
177_1
74 years, male
384.5
172_1
72 years, female
384.0
386_1
76 years, male
372.7
229_1
69 years, female
367.1
389_1
86 years, female
359.8
526_1
61 years, male
351.8
379_1
60 years, male
349.3
375_1
74 years, female
348.2
404_1
82 years, female
346.1
6_1
73 years, female
342.9
356_1
87 years, female
342.8
480_1
63 years, male
342.2
355_1
70 years, female
340.6
405_1
91 years, male
338.0
217_1
76 years, male
334.3
354_1
81 years, female
334.1
243_1
75 years, male
333.6
189_1
76 years, male
332.2
350_1
84 years, female
330.6
394_1
75 years, female
328.9
468_1
89 years, male
327.8
353_1
82 years, female
326.4
347_1
72 years, male
324.9
377_1
82 years, female
324.7
349_1
83 years, male
319.3
316_1
62 years, male
314.9
335_1
73 years, female
312.1
376_1
75 years, female
311.7
324_1
76 years, male
311.1
447_1
81 years, male
305.1
265_1
87 years, male
304.0
292_1
71 years, male
298.2
286_1
68 years, female
295.1
503_1
68 years, male
290.1
126_1
63 years, male
283.6
9_1
66 years, female
278.8
406_1
79 years, male
278.5
318_1
68 years, male
277.8
291_1
76 years, male
274.1
115_1
83 years, male
269.6
251_1
78 years, male
269.5
254_1
77 years, female
269.0
321_1
62 years, female
269.0
518_1
75 years, female
268.2
415_1
77 years, female
264.7
266_1
85 years, male
263.0
384_1
83 years, male
262.4
348_1
84 years, male
257.4
517_1
88 years, male
256.3
218_1
71 years, female
255.7
32_1
67 years, male
250.8
414_1
84 years, female
249.3
293_1
68 years, female
247.9
173_1
67 years, male
246.2
351_1
91 years, male
242.5
99_1
64 years, male
239.0
320_1
89 years, female
236.5
452_1
88 years, female
232.9
499_1
55 years, female
230.8
506_1
65 years, male
223.4
264_1
73 years, female
223.0
466_1
57 years, female
222.9
35_1
74 years, female
220.5
396_1
62 years, male
220.3
153_1
70 years, female
219.5
137_1
83 years, male
219.4
43_1
64 years, female
218.7
81_1
67 years, male
218.2
117_1
61 years, male
215.9
295_1
61 years, female
213.8
317_1
60 years, male
208.7
17_1
71 years, male
208.2
162_1
79 years, female
206.3
314_1
67 years, male
205.0
18_1
88 years, male
204.5
42_1
85 years, male
201.4
120_1
70 years, female
199.1
311_1
78 years, male
194.4
4_1
88 years, female
192.1
145_1
84 years, male
190.4
322_1
76 years, male
188.5
313_1
79 years, female
184.9
315_1
62 years, female
184.8
109_1
81 years, female
182.1
142_1
61 years, female
179.7
288_1
66 years, female
177.4
413_1
59 years, female
177.3
307_1
66 years, female
175.4
2_1
77 years, female
167.2
490_1
67 years, female
166.7
149_1
88 years, male
164.4
119_1
70 years, female
155.6
41_1
94 years, female
144.9
89_1
63 years, male
137.6
495_1
57 years, female
131.2
139_1
64 years, female
124.6
501_1
88 years, male
123.9
491_1
89 years, female
110.7
308_1
70 years, female
107.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.