PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:208.9 nTPM
FANTOM5:161.8 Scaled Tags Per Million
Pig:50.5 nTPM
Mouse:20.5 nTPM
Allen mouse:12.7 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 208.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 181.9
2188 Female, age 91, both hemispheres 238.2
2090 Male, age 80, both hemispheres 191.8
2301 Female, age 85, both hemispheres 178.9
1984 Male, age 76, both hemispheres 118.9
Area postrema
nTPM: 136.3
2306 Male, age 80, both hemispheres 183.8
2054 Male, age 76, both hemispheres 121.2
2799 Male, age 61, both hemispheres 103.8
Dorsal cochlear nucleus
nTPM: 171.8
2802 Male, age 74, right hemisphere 216.2
2187 Female, age 91, both hemispheres 183.0
2378 Male, age 80, both hemispheres 176.7
2370 Male, age 61, both hemispheres 143.4
2058 Male, age 76, both hemispheres 139.6
Dorsal medullary reticular nucleus
nTPM: 166.8
2040 Female, age 85, both hemispheres 171.8
2088 Male, age 76, both hemispheres 165.0
2373 Male, age 61, both hemispheres 163.6
Dorsal motor vagal complex
nTPM: 132.9
2185 Male, age 76, both hemispheres 187.2
2797 Male, age 61, both hemispheres 149.4
2000 Male, age 74, unknown 139.5
2807 Female, age 85, both hemispheres 133.0
2133 Female, age 91, both hemispheres 126.3
2813 Female, age 72, unknown 115.0
2643 Male, age 74, both hemispheres 111.3
2844 Male, age 55, unknown 101.7
Dorsal tegmental nucleus
nTPM: 150.7
2083 Male, age 80, both hemispheres 171.9
2326 Male, age 74, both hemispheres 162.7
1936 Male, age 76, left hemisphere 154.0
2358 Male, age 61, both hemispheres 114.1
Dorsolateral tegmental area
nTPM: 150.6
2751 Female, age 85, both hemispheres 207.5
2654 Male, age 80, both hemispheres 173.9
2360 Male, age 74, both hemispheres 131.7
2337 Male, age 61, both hemispheres 130.0
2141 Male, age 76, both hemispheres 109.9
Gigantocellular reticular nuclei, medullary
nTPM: 183.3
2387 Female, age 91, both hemispheres 220.7
1876 Female, age 85, both hemispheres 206.0
2314 Male, age 61, both hemispheres 198.8
2310 Male, age 80, both hemispheres 166.2
2022 Male, age 76, right hemisphere 162.6
2462 Male, age 74, both hemispheres 145.4
Gigantocellular reticular nuclei, pars
nTPM: 178.6
2706 Male, age 80, both hemispheres 201.5
2336 Male, age 61, both hemispheres 189.3
2330 Male, age 80, both hemispheres 187.3
2084 Female, age 85, both hemispheres 166.2
2168 Male, age 76, both hemispheres 148.6
Inferior olive
nTPM: 169.0
2178 Male, age 61, both hemispheres 197.1
2379 Male, age 80, both hemispheres 172.3
2628 Female, age 91, both hemispheres 165.4
2563 Male, age 74, both hemispheres 162.9
2085 Female, age 85, both hemispheres 147.1
Kolliker-Fuse nucleus
nTPM: 166.9
2793 Female, age 91, left hemisphere 235.0
2163 Male, age 80, both hemispheres 158.4
2315 Male, age 76, right hemisphere 107.4
Lateral lemniscal nuclei
nTPM: 188.0
2320 Female, age 91, left hemisphere 227.6
2036 Male, age 80, both hemispheres 196.8
2453 Male, age 74, right hemisphere 195.7
2746 Female, age 85, left hemisphere 177.4
2169 Male, age 76, both hemispheres 142.6
Lateral medullary reticular nucleus
nTPM: 169.4
2852 Male, age 80, both hemispheres 199.3
2190 Female, age 85, both hemispheres 172.4
2374 Male, age 61, both hemispheres 171.7
2305 Male, age 74, both hemispheres 167.4
2044 Male, age 76, both hemispheres 166.7
2804 Female, age 91, both hemispheres 138.9
Lateral parabrachial nucleus
nTPM: 169.2
2792 Male, age 76, both hemispheres 216.1
2013 Male, age 80, both hemispheres 185.3
2790 Male, age 61, both hemispheres 140.6
2139 Female, age 85, right hemisphere 134.9
Lateral vestibular nucleus
nTPM: 151.6
2184 Male, age 76, both hemispheres 162.7
2311 Male, age 80, both hemispheres 140.4
Locus coeruleus
nTPM: 113.9
2162 Male, age 80, both hemispheres 132.6
2720 Male, age 74, both hemispheres 132.4
2014 Male, age 55, unknown 125.6
2317 Female, age 72, unknown 111.5
2788 Male, age 74, unknown 110.6
2123 Female, age 91, both hemispheres 95.3
1980 Male, age 76, both hemispheres 89.2
Medial olivary nucleus
nTPM: 185.6
1943 Male, age 61, both hemispheres 204.0
1962 Male, age 76, both hemispheres 190.0
2138 Female, age 91, both hemispheres 176.8
2851 Male, age 80, both hemispheres 171.6
Medial parabrachial nucleus
nTPM: 165.5
2463 Female, age 85, right hemisphere 190.3
2170 Female, age 91, both hemispheres 185.5
2786 Male, age 76, both hemispheres 159.6
2854 Male, age 80, both hemispheres 158.0
2156 Male, age 61, both hemispheres 133.9
Medial periolivary nuclei
nTPM: 169.1
2458 Female, age 91, both hemispheres 203.5
2081 Male, age 80, both hemispheres 194.6
2791 Male, age 74, right hemisphere 181.1
2171 Female, age 85, both hemispheres 144.0
2063 Male, age 76, both hemispheres 122.5
Medial vestibular nucleus
nTPM: 151.6
2803 Female, age 91, both hemispheres 203.2
2801 Male, age 74, both hemispheres 167.2
2093 Male, age 80, both hemispheres 162.1
2624 Male, age 61, both hemispheres 141.5
2743 Female, age 85, both hemispheres 126.1
2134 Male, age 76, both hemispheres 109.6
Motor facial nucleus
nTPM: 170.9
2126 Male, age 61, both hemispheres 194.7
2697 Female, age 85, both hemispheres 190.3
2795 Female, age 91, both hemispheres 180.7
2365 Male, age 74, right hemisphere 169.8
2327 Male, age 80, both hemispheres 165.6
2062 Male, age 76, both hemispheres 124.5
Motor hypoglossal nucleus
nTPM: 143.4
2125 Female, age 91, both hemispheres 175.7
2132 Female, age 85, both hemispheres 170.8
2182 Male, age 80, both hemispheres 164.0
2461 Male, age 61, both hemispheres 110.7
2277 Male, age 76, both hemispheres 96.0
Motor trigeminal nucleus
nTPM: 191.0
2560 Male, age 74, both hemispheres 247.9
2321 Female, age 91, both hemispheres 220.6
2079 Male, age 80, both hemispheres 172.4
2309 Male, age 76, both hemispheres 172.1
2335 Male, age 61, both hemispheres 141.8
Nuclei of the trapezoid body
nTPM: 164.6
2368 Female, age 91, both hemispheres 211.6
2166 Male, age 80, both hemispheres 193.5
2159 Male, age 61, both hemispheres 172.2
2735 Female, age 85, both hemispheres 127.6
1983 Male, age 76, both hemispheres 117.9
Nucleus ambiguus
nTPM: 174.7
2071 Male, age 76, both hemispheres 190.0
2096 Female, age 85, both hemispheres 159.3
Nucleus cuneatus
nTPM: 182.2
2380 Male, age 80, both hemispheres 222.7
2808 Female, age 85, both hemispheres 194.6
2100 Male, age 76, both hemispheres 194.3
2805 Female, age 91, both hemispheres 192.9
2376 Male, age 61, both hemispheres 190.7
2381 Male, age 80, both hemispheres 188.7
2564 Male, age 74, both hemispheres 160.3
2131 Male, age 76, both hemispheres 147.8
2562 Male, age 61, both hemispheres 147.5
Nucleus gracilis
nTPM: 191.5
2382 Male, age 80, both hemispheres 252.8
2299 Female, age 85, both hemispheres 174.3
2627 Male, age 74, both hemispheres 147.5
Nucleus raphe magnus
nTPM: 163.6
2459 Female, age 91, both hemispheres 198.6
2328 Male, age 80, both hemispheres 180.9
2455 Male, age 74, both hemispheres 175.5
2051 Male, age 76, both hemispheres 152.3
2172 Female, age 85, both hemispheres 139.0
2160 Male, age 61, both hemispheres 135.6
Nucleus raphe obscurus
nTPM: 197.8
2845 Female, age 85, midline 211.2
2142 Male, age 76, midline 192.1
2800 Male, age 61, midline 190.1
Nucleus raphe pallidus
nTPM: 165.2
2145 Male, age 76, midline 199.5
2183 Male, age 80, midline 155.9
1924 Male, age 61, midline 140.3
Nucleus tractus solitarii
nTPM: 103.1
2144 Female, age 91, right hemisphere 115.1
2656 Male, age 76, both hemispheres 114.2
2307 Male, age 80, both hemispheres 100.8
2191 Female, age 85, both hemispheres 82.1
Paramedian reticular nucleus
nTPM: 185.7
2052 Male, age 76, both hemispheres 239.4
2050 Female, age 85, both hemispheres 181.1
2057 Male, age 80, both hemispheres 175.6
2313 Male, age 61, both hemispheres 146.8
Parvicellular reticular nuclei
nTPM: 188.5
2558 Male, age 74, both hemispheres 207.0
2095 Male, age 76, both hemispheres 191.4
2119 Male, age 80, both hemispheres 167.1
Parvicellular reticular nuclei, medullary
nTPM: 155.8
2189 Female, age 91, both hemispheres 174.4
2091 Female, age 85, both hemispheres 151.7
2181 Male, age 80, left hemisphere 141.4
Pedunculopontine tegmental nucleus
nTPM: 140.2
2334 Male, age 80, both hemispheres 146.9
1921 Female, age 85, both hemispheres 142.0
2338 Male, age 61, both hemispheres 131.7
Peritrigeminal nucleus
nTPM: 141.2
2136 Male, age 76, both hemispheres 144.7
2179 Male, age 61, both hemispheres 142.0
2067 Female, age 85, both hemispheres 136.8
Pontine nuclei
nTPM: 190.8
2454 Male, age 74, left hemisphere 265.4
2319 Female, age 91, both hemispheres 223.5
2109 Female, age 72, unknown 195.8
2115 Male, age 80, left hemisphere 185.7
1863 Male, age 55, unknown 171.1
2727 Male, age 61, right hemisphere 166.3
2787 Female, age 85, both hemispheres 162.6
1968 Male, age 76, left hemisphere 156.3
Pontine raphe nucleus
nTPM: 147.7
2122 Female, age 85, midline 156.3
2853 Male, age 76, midline 139.2
Posteroventral cochlear nucleus
nTPM: 187.7
2135 Female, age 91, both hemispheres 271.5
2341 Male, age 80, both hemispheres 203.7
2371 Male, age 61, both hemispheres 158.2
2070 Male, age 76, both hemispheres 156.1
2752 Female, age 85, both hemispheres 148.7
Prepositus hypoglossal nucleus
nTPM: 142.1
2855 Female, age 85, right hemisphere 164.8
2086 Male, age 80, both hemispheres 119.4
Principal sensory trigeminal nucleus
nTPM: 172.2
2367 Female, age 91, left hemisphere 228.6
2008 Male, age 80, left hemisphere 172.9
2324 Male, age 76, both hemispheres 146.9
2158 Male, age 61, both hemispheres 140.4
Reticular pontine nucleus, caudal
nTPM: 194.8
2559 Male, age 74, both hemispheres 245.8
2457 Female, age 91, both hemispheres 208.3
2092 Male, age 76, both hemispheres 163.5
2332 Male, age 80, right hemisphere 161.7
Reticular pontine nucleus, oral
nTPM: 208.9
2366 Female, age 91, both hemispheres 248.4
2361 Male, age 74, both hemispheres 225.9
1939 Male, age 80, both hemispheres 196.8
2012 Female, age 85, both hemispheres 187.7
2167 Male, age 76, both hemispheres 185.6
Reticulotegmental nucleus
nTPM: 171.9
2452 Male, age 74, both hemispheres 209.1
2322 Female, age 91, both hemispheres 175.9
2333 Male, age 80, both hemispheres 168.2
2325 Male, age 76, both hemispheres 134.3
Spinal trigeminal nucleus, caudal
nTPM: 151.6
2312 Male, age 61, both hemispheres 183.1
2390 Female, age 91, both hemispheres 162.6
2308 Male, age 80, both hemispheres 146.1
2447 Male, age 76, both hemispheres 139.5
2642 Male, age 74, both hemispheres 126.8
Spinal trigeminal nucleus, interpolar
nTPM: 149.1
2389 Female, age 91, both hemispheres 170.9
2625 Male, age 61, both hemispheres 153.3
2033 Male, age 80, both hemispheres 151.0
2386 Female, age 85, both hemispheres 144.1
2066 Male, age 76, right hemisphere 126.5
Spinal trigeminal nucleus, oral
nTPM: 145.9
2164 Male, age 80, both hemispheres 165.2
1978 Male, age 76, both hemispheres 141.5
2737 Female, age 85, both hemispheres 130.8
Spinal vestibular nucleus
nTPM: 171.2
2384 Male, age 74, both hemispheres 195.5
2186 Female, age 91, both hemispheres 186.5
2748 Male, age 76, both hemispheres 184.1
2806 Female, age 85, both hemispheres 176.1
2780 Male, age 80, both hemispheres 148.7
2796 Male, age 61, both hemispheres 136.2
Subcoeruleus area
nTPM: 170.4
2369 Female, age 85, left hemisphere 237.6
2089 Male, age 76, left hemisphere 163.3
2451 Male, age 74, both hemispheres 163.0
1958 Male, age 80, both hemispheres 160.9
2323 Female, age 91, left hemisphere 127.3
Superior olive
nTPM: 186.3
2561 Female, age 91, both hemispheres 202.5
2020 Male, age 76, both hemispheres 193.6
2329 Male, age 80, right hemisphere 191.5
1875 Female, age 85, both hemispheres 175.1
2364 Male, age 74, right hemisphere 168.9
Superior vestibular nucleus
nTPM: 128.0
2015 Male, age 80, both hemispheres 136.6
2061 Male, age 76, both hemispheres 128.7
2383 Male, age 74, both hemispheres 118.7
Ventral medullary reticular nucleus
nTPM: 182.4
2372 Male, age 61, both hemispheres 189.3
2060 Male, age 76, both hemispheres 175.6
Ventral periolivary nuclei
nTPM: 167.1
2023 Male, age 76, both hemispheres 199.0
2794 Female, age 91, left hemisphere 182.2
2165 Male, age 80, both hemispheres 152.6
2130 Female, age 85, both hemispheres 134.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 156.0
2118 Male, age 80, both hemispheres 176.6
2180 Male, age 61, both hemispheres 169.6
1986 Male, age 76, both hemispheres 153.5
2302 Female, age 91, both hemispheres 142.0
2741 Female, age 85, both hemispheres 138.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 177.8
2456 Female, age 91, both hemispheres 216.2
2840 Female, age 85, both hemispheres 185.4
2449 Male, age 74, both hemispheres 179.8
1959 Male, age 76, both hemispheres 167.1
2161 Male, age 80, both hemispheres 163.3
2359 Male, age 61, both hemispheres 155.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 161.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 114.1
FF:10165-103B3 76 years, female 124.4
FF:10182-103D2 60 years, female 103.8
Medulla oblongata
Scaled Tags Per Million: 105.6
FF:10038-101F2 18-64 years, mixed 149.0
FF:10155-103A2 76 years, female 101.6
FF:10174-103C3 60 years, female 66.0
Pons
Scaled Tags Per Million: 161.8
FF:10033-101E6 18-54 years, mixed 161.8

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 50.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 50.5
Samples: 4

Max nTPM: 54.6
Min nTPM: 42.7
Sample A Female 54.6
Sample B Female 42.7
Sample C Male 52.6
Sample D Male 51.9
Pons
nTPM: 48.9
Samples: 4

Max nTPM: 69.5
Min nTPM: 37.7
Sample A Female 69.5
Sample B Female 37.7
Sample C Male 38.7
Sample D Male 49.6

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 20.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 20.5
Samples: 4

Max nTPM: 21.4
Min nTPM: 18.6
Sample A Male 21.4
Sample B Male 20.9
Sample C Female 18.6
Sample D Female 21.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 12.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 12.7
69059943 Antisense, RP_050317_04_F03, Mouse strain C57BL/6J (56 days, male) 12.7
Pons
Expression energy: 10.4
69059943 Antisense, RP_050317_04_F03, Mouse strain C57BL/6J (56 days, male) 10.4

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