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NSFL1C
HPA
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  • NSFL1C
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

NSFL1C
Synonyms dJ776F14.1, p47, UBX1, UBXD10, UBXN2C
Gene descriptioni

Full gene name according to HGNC.

NSFL1 cofactor
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 20
Cytoband p13
Chromosome location (bp) 1442162 - 1473842
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000088833 (version 109)
Entrez gene 55968
HGNC HGNC:15912
UniProt Q9UNZ2 (UniProt - Evidence at protein level)
neXtProt NX_Q9UNZ2
GeneCards NSFL1C
Antibodypedia NSFL1C antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Reduces the ATPase activity of VCP (By similarity). Necessary for the fragmentation of Golgi stacks during mitosis and for VCP-mediated reassembly of Golgi stacks after mitosis (By similarity). May play a role in VCP-mediated formation of transitional endoplasmic reticulum (tER) (By similarity). Inhibits the activity of CTSL (in vitro) 1. Together with UBXN2B/p37, regulates the centrosomal levels of kinase AURKA/Aurora A during mitotic progression by promoting AURKA removal from centrosomes in prophase 2. Also, regulates spindle orientation during mitosis 3.... show less
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Lipid-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

N-ethylmaleimide-sensitive factor (NSF) and valosin-containing protein (p97) are two ATPases known to be involved in transport vesicle/target membrane fusion and fusions between membrane compartments. A trimer of the protein encoded by this gene binds a hexamer of cytosolic p97 and is required for p97-mediated regrowth of Golgi cisternae from mitotic Golgi fragments. Alternative splicing results in multiple transcript variants. A related pseudogene has been identified on chromosome 8. [provided by RefSeq, May 2011]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
NSFL1C-201
ENSP00000216879
ENST00000216879
Q9UNZ2
[Direct mapping] NSFL1 cofactor p47
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000045 [autophagosome assembly]
GO:0000132 [establishment of mitotic spindle orientation]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005795 [Golgi stack]
GO:0005815 [microtubule organizing center]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0007030 [Golgi organization]
GO:0008289 [lipid binding]
GO:0031468 [nuclear membrane reassembly]
GO:0043130 [ubiquitin binding]
GO:0043161 [proteasome-mediated ubiquitin-dependent protein catabolic process]
GO:0046604 [positive regulation of mitotic centrosome separation]
GO:0061025 [membrane fusion]
GO:1904780 [negative regulation of protein localization to centrosome]
GO:1990730 [VCP-NSFL1C complex]
Show all
370 aa
40.6 kDa
No 0
NSFL1C-202
ENSP00000338643
ENST00000353088
Q9UNZ2
[Direct mapping] NSFL1 cofactor p47
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000045 [autophagosome assembly]
GO:0000132 [establishment of mitotic spindle orientation]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005795 [Golgi stack]
GO:0005815 [microtubule organizing center]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0007030 [Golgi organization]
GO:0008289 [lipid binding]
GO:0031468 [nuclear membrane reassembly]
GO:0043130 [ubiquitin binding]
GO:0043161 [proteasome-mediated ubiquitin-dependent protein catabolic process]
GO:0046604 [positive regulation of mitotic centrosome separation]
GO:0061025 [membrane fusion]
GO:1904780 [negative regulation of protein localization to centrosome]
GO:1990730 [VCP-NSFL1C complex]
Show all
339 aa
37.3 kDa
No 0
NSFL1C-206
ENSP00000418529
ENST00000476071
Q9UNZ2
[Direct mapping] NSFL1 cofactor p47
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000045 [autophagosome assembly]
GO:0000132 [establishment of mitotic spindle orientation]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005795 [Golgi stack]
GO:0005815 [microtubule organizing center]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0007030 [Golgi organization]
GO:0008289 [lipid binding]
GO:0031468 [nuclear membrane reassembly]
GO:0043130 [ubiquitin binding]
GO:0043161 [proteasome-mediated ubiquitin-dependent protein catabolic process]
GO:0046604 [positive regulation of mitotic centrosome separation]
GO:0061025 [membrane fusion]
GO:1904780 [negative regulation of protein localization to centrosome]
GO:1990730 [VCP-NSFL1C complex]
Show all
372 aa
40.8 kDa
No 0

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