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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:708.1 nTPM
HPA Brain:384.0 nTPM
GTEx:708.1 nTPM
FANTOM5:42.3 Scaled Tags Per Million
Pig:767.1 nTPM
Mouse:522.7 nTPM
Allen mouse:15.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA068418
Glial cells Not detected
Neuronal cells Medium


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

384.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 331.0
2846 Female, age 79, unknown 442.1
1857 Female, age 85, left hemisphere 382.4
2290 Female, age 72, unknown 378.0
1854 Male, age 80, left hemisphere 342.6
2481 Female, age 94, left hemisphere 314.6
1781 Male, age 74, unknown 289.2
2288 Male, age 75, left hemisphere 256.8
2289 Male, age 61, right hemisphere 242.0
Globus pallidus, externus
nTPM: 384.0
2772 Female, age 79, unknown 444.2
1996 Male, age 80, right hemisphere 440.9
2395 Male, age 75, both hemispheres 432.2
2567 Female, age 72, unknown 325.7
2646 Male, age 61, right hemisphere 277.2
Globus pallidus, internus
nTPM: 363.0
2483 Female, age 94, right hemisphere 441.6
2287 Male, age 75, right hemisphere 413.6
2037 Male, age 80, right hemisphere 380.1
2778 Female, age 91, both hemispheres 363.9
1818 Male, age 74, unknown 335.4
2111 Female, age 85, right hemisphere 304.0
2566 Female, age 72, unknown 302.4
Nucleus accumbens
nTPM: 319.2
2698 Female, age 72, unknown 403.9
1856 Female, age 91, right hemisphere 356.8
1783 Male, age 74, unknown 333.8
1806 Female, age 85, left hemisphere 327.4
2391 Female, age 94, left hemisphere 320.2
2732 Male, age 80, right hemisphere 291.3
2286 Male, age 75, left hemisphere 272.4
2824 Male, age 61, right hemisphere 247.5
Nucleus basalis of Meynert
nTPM: 338.3
2821 Male, age 75, both hemispheres 366.0
2393 Male, age 80, right hemisphere 332.6
2484 Female, age 94, left hemisphere 330.6
2569 Male, age 61, both hemispheres 323.9
Nucleus of the diagonal band
nTPM: 291.8
1812 Female, age 91, both hemispheres 326.3
2775 Male, age 80, right hemisphere 309.8
1979 Male, age 74, unknown 293.1
2195 Female, age 85, both hemispheres 286.8
2029 Male, age 61, right hemisphere 242.9
Putamen
nTPM: 327.3
2466 Female, age 79, unknown 386.0
1829 Male, age 74, unknown 343.6
1838 Male, age 80, right hemisphere 320.4
2489 Female, age 72, unknown 313.8
2482 Female, age 94, left hemisphere 311.9
1937 Female, age 91, right hemisphere 310.3
2647 Male, age 75, left hemisphere 305.2
Septal nuclei
nTPM: 286.6
2031 Female, age 72, unknown 325.0
2199 Male, age 80, right hemisphere 323.8
1960 Male, age 74, unknown 301.6
2394 Male, age 61, left hemisphere 293.2
2009 Female, age 91, both hemispheres 263.6
2059 Female, age 85, both hemispheres 254.0
2629 Female, age 94, right hemisphere 245.2
Stria terminalis, bed nucleus
nTPM: 258.6
1974 Female, age 91, both hemispheres 291.5
2201 Male, age 74, unknown 265.9
2486 Female, age 94, both hemispheres 218.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

708.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 591.4
Samples: 246

Max nTPM: 1354.2
Min nTPM: 364.7
Std nTPM: 155.3
Median nTPM: 559.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1354.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1192.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1081.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1055.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1048.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1014.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 990.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 987.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 985.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 971.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 961.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 941.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 910.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 902.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 888.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 885.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 882.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 876.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 871.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 871.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 854.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 823.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 789.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 779.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 775.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 772.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 761.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 755.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 744.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 739.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 736.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 736.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 733.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 724.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 719.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 714.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 708.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 707.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 704.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 703.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 702.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 700.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 694.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 688.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 684.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 684.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 683.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 681.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 677.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 674.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 673.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 673.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 666.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 663.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 662.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 661.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 661.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 660.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 656.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 655.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 655.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 654.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 650.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 650.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 647.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 647.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 645.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 643.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 643.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 642.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 642.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 638.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 638.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 631.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 628.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 625.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 622.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 621.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 621.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 620.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 618.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 616.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 616.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 616.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 616.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 616.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 615.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 615.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 614.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 612.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 611.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 610.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 606.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 605.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 604.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 598.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 596.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 596.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 596.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 594.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 594.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 594.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 593.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 590.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 590.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 589.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 586.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 581.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 580.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 577.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 574.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 572.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 571.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 568.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 567.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 567.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 566.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 565.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 565.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 565.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 562.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 561.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 559.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 559.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 559.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 559.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 553.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 552.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 551.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 550.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 548.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 545.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 542.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 540.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 537.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 537.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 535.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 535.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 534.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 534.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 533.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 532.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 531.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 530.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 529.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 529.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 529.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 528.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 528.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 526.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 526.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 524.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 523.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 523.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 522.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 522.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 521.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 521.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 520.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 519.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 517.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 517.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 516.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 514.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 513.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 512.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 510.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 509.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 509.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 509.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 508.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 508.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 506.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 504.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 502.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 499.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 498.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 497.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 497.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 497.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 496.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 494.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 492.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 492.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 492.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 488.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 485.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 485.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 485.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 485.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 483.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 483.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 480.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 480.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 479.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 478.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 477.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 476.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 475.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 474.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 469.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 468.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 467.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 464.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 463.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 462.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 460.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 458.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 455.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 454.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 454.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 451.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 449.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 447.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 446.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 446.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 442.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 442.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 442.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 441.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 437.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 437.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 435.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 426.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 426.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 422.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 411.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 408.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 407.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 404.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 400.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 398.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 396.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 396.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 392.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 390.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 384.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 384.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 384.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 382.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 382.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 380.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 375.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 375.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 371.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 364.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 708.1
Samples: 246

Max nTPM: 1893.7
Min nTPM: 276.2
Std nTPM: 185.7
Median nTPM: 673.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1893.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 1389.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 1359.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 1339.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 1241.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 1202.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1188.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 1173.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1149.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 1118.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1099.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1036.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1023.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 1000.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 990.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 986.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 969.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 964.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 951.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 943.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 932.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 923.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 915.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 913.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 907.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 903.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 901.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 896.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 893.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 888.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 887.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 886.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 878.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 873.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 846.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 844.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 844.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 841.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 838.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 837.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 834.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 834.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 833.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 833.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 832.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 829.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 820.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 816.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 814.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 813.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 812.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 811.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 809.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 808.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 807.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 807.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 805.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 800.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 800.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 796.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 796.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 794.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 793.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 793.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 792.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 789.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 785.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 778.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 777.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 776.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 775.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 773.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 770.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 768.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 768.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 763.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 761.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 756.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 756.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 754.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 753.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 751.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 742.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 740.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 736.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 734.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 734.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 731.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 729.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 728.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 724.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 724.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 723.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 720.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 716.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 716.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 715.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 715.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 712.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 708.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 708.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 708.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 708.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 706.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 705.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 705.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 704.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 701.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 701.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 699.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 698.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 696.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 695.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 691.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 690.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 690.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 689.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 687.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 682.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 680.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 679.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 678.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 675.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 671.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 669.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 668.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 666.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 666.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 665.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 664.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 662.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 659.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 657.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 653.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 652.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 652.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 652.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 651.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 651.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 650.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 650.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 644.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 643.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 643.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 642.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 642.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 641.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 639.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 636.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 636.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 632.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 631.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 631.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 631.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 629.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 629.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 628.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 628.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 625.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 624.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 622.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 621.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 620.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 619.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 619.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 617.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 617.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 614.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 613.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 612.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 612.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 609.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 609.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 607.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 606.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 604.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 601.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 598.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 598.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 597.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 596.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 593.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 593.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 588.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 588.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 587.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 587.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 586.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 584.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 584.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 583.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 582.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 581.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 580.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 579.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 578.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 575.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 569.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 568.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 566.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 565.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 562.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 561.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 561.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 559.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 556.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 555.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 554.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 552.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 549.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 548.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 544.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 538.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 536.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 533.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 529.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 529.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 527.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 523.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 522.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 522.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 520.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 517.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 515.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 515.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 514.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 508.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 506.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 505.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 501.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 498.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 498.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 494.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 493.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 489.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 475.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 475.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 470.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 466.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 462.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 457.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 447.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 439.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 428.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 417.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 276.2
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Brain - Putamen (basal ganglia)
Average nTPM: 624.6
Samples: 205

Max nTPM: 1159.2
Min nTPM: 347.8
Std nTPM: 145.1
Median nTPM: 602.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1159.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1025.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1021.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1007.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 990.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 960.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 949.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 903.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 888.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 886.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 877.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 877.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 876.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 870.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 869.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 864.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 863.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 848.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 847.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 845.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 844.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 839.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 828.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 822.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 820.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 795.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 792.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 791.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 787.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 786.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 781.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 779.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 771.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 767.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 761.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 756.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 747.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 746.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 745.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 739.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 736.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 733.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 731.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 730.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 730.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 728.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 727.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 726.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 719.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 711.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 711.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 709.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 705.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 703.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 697.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 693.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 691.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 690.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 689.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 689.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 688.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 684.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 681.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 678.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 678.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 677.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 674.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 674.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 673.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 665.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 660.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 657.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 657.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 656.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 656.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 654.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 653.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 648.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 645.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 642.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 641.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 640.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 637.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 636.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 633.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 630.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 628.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 627.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 627.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 623.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 620.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 617.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 617.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 617.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 616.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 611.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 609.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 609.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 608.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 607.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 606.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 605.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 602.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 596.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 596.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 596.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 593.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 593.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 591.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 590.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 589.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 588.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 588.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 587.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 584.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 583.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 582.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 574.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 573.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 572.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 571.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 570.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 569.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 569.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 568.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 566.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 564.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 562.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 557.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 557.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 551.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 550.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 549.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 549.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 547.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 547.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 547.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 546.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 545.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 543.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 541.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 541.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 537.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 535.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 531.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 530.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 530.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 529.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 525.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 525.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 523.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 520.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 518.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 517.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 515.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 512.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 510.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 510.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 507.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 506.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 504.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 504.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 503.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 501.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 500.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 497.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 496.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 494.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 492.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 491.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 489.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 488.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 487.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 486.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 486.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 482.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 480.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 477.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 469.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 468.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 466.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 465.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 465.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 458.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 453.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 451.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 451.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 449.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 443.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 436.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 435.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 435.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 433.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 432.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 431.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 425.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 424.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 419.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 411.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 404.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 403.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 385.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 381.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 363.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 347.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

42.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 35.2
FF:10164-103B2 76 years, female 35.2
Nucleus accumbens
Scaled Tags Per Million: 42.3
FF:10037-101F1 23-56 years, mixed 42.3
Putamen
Scaled Tags Per Million: 41.9
FF:10176-103C5 60 years, female 41.9
Globus pallidus
Scaled Tags Per Million: 26.2
FF:10175-103C4 60 years, female 31.3
FF:10161-103A8 76 years, female 21.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

767.1
Pig sample Sample description nTPM
Caudate
nTPM: 594.5
Samples: 4

Max nTPM: 639.2
Min nTPM: 512.6
Sample A Female 631.3
Sample B Female 594.7
Sample C Male 639.2
Sample D Male 512.6
Putamen
nTPM: 742.6
Samples: 4

Max nTPM: 855.2
Min nTPM: 584.7
Sample A Female 823.7
Sample B Female 584.7
Sample C Male 855.2
Sample D Male 706.6
Septum
nTPM: 767.1
Samples: 4

Max nTPM: 982.0
Min nTPM: 654.1
Sample A Female 982.0
Sample B Female 738.4
Sample C Male 693.7
Sample D Male 654.1
Ventral pallidum
nTPM: 720.0
Samples: 4

Max nTPM: 794.4
Min nTPM: 669.0
Sample A Female 715.5
Sample B Female 794.4
Sample C Male 669.0
Sample D Male 701.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

522.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 479.7
Samples: 4

Max nTPM: 493.3
Min nTPM: 461.6
Sample A Male 471.1
Sample B Male 493.3
Sample C Female 461.6
Sample D Female 492.7
Septum
nTPM: 522.7
Samples: 4

Max nTPM: 567.9
Min nTPM: 499.5
Sample A Male 499.5
Sample B Male 567.9
Sample C Female 510.8
Sample D Female 512.6
Ventral forebrain
nTPM: 448.3
Samples: 4

Max nTPM: 509.0
Min nTPM: 416.9
Sample A Male 420.3
Sample B Male 446.8
Sample C Female 509.0
Sample D Female 416.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

15.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 15.7
69818317 Antisense, RP_050510_04_H04, Mouse strain C57BL/6J (56 days, male) 15.7
Pallidum
Expression energy: 13.9
69818317 Antisense, RP_050510_04_H04, Mouse strain C57BL/6J (56 days, male) 13.9

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