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SLC23A2
HPA
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  • SLC23A2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SLC23A2
Synonyms KIAA0238, SLC23A1, SVCT2, YSPL2
Gene descriptioni

Full gene name according to HGNC.

Solute carrier family 23 member 2
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Metabolic proteins
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 20
Cytoband p13
Chromosome location (bp) 4852356 - 5010293
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000089057 (version 109)
Entrez gene 9962
HGNC HGNC:10973
UniProt Q9UGH3 (UniProt - Evidence at protein level)
neXtProt NX_Q9UGH3
GeneCards SLC23A2
Antibodypedia SLC23A2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Sodium/ascorbate cotransporter 1, 2. Mediates electrogenic uptake of vitamin C, with a stoichiometry of 2 Na(+) for each ascorbate 3.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Cell adhesion, Ion transport, Sodium transport, Symport, Transport
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Calcium, Sodium
Gene summary (Entrez)i

Useful information about the gene from Entrez

The absorption of vitamin C into the body and its distribution to organs requires two sodium-dependent vitamin C transporters. This gene encodes one of the two required transporters and the encoded protein accounts for tissue-specific uptake of vitamin C. Previously, this gene had an official symbol of SLC23A1. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SLC23A2-201
ENSP00000344322
ENST00000338244
Q9UGH3
[Direct mapping] Solute carrier family 23 member 2
Show all
A0A140VK48
[Target identity:100%; Query identity:100%] Solute carrier family 23 (Nucleobase transporters), member 2, isoform CRA_b; Testicular secretory protein Li 48
Show all
Metabolic proteins
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005737 [cytoplasm]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0006814 [sodium ion transport]
GO:0006979 [response to oxidative stress]
GO:0008520 [L-ascorbate:sodium symporter activity]
GO:0009925 [basal plasma membrane]
GO:0015229 [L-ascorbic acid transmembrane transporter activity]
GO:0015293 [symporter activity]
GO:0015882 [L-ascorbic acid transmembrane transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016323 [basolateral plasma membrane]
GO:0016324 [apical plasma membrane]
GO:0019852 [L-ascorbic acid metabolic process]
GO:0022857 [transmembrane transporter activity]
GO:0055085 [transmembrane transport]
GO:0071361 [cellular response to ethanol]
GO:0098590 [plasma membrane region]
GO:1901215 [negative regulation of neuron death]
GO:1903861 [positive regulation of dendrite extension]
Show all
650 aa
70.3 kDa
No >9
SLC23A2-202
ENSP00000368637
ENST00000379333
Q9UGH3
[Direct mapping] Solute carrier family 23 member 2
Show all
A0A140VK48
[Target identity:100%; Query identity:100%] Solute carrier family 23 (Nucleobase transporters), member 2, isoform CRA_b; Testicular secretory protein Li 48
Show all
Metabolic proteins
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0006814 [sodium ion transport]
GO:0008520 [L-ascorbate:sodium symporter activity]
GO:0015229 [L-ascorbic acid transmembrane transporter activity]
GO:0015293 [symporter activity]
GO:0015882 [L-ascorbic acid transmembrane transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016323 [basolateral plasma membrane]
GO:0016324 [apical plasma membrane]
GO:0019852 [L-ascorbic acid metabolic process]
GO:0022857 [transmembrane transporter activity]
GO:0055085 [transmembrane transport]
GO:0098590 [plasma membrane region]
Show all
650 aa
70.3 kDa
No >9
SLC23A2-203
ENSP00000396364
ENST00000423430
H0Y544
[Direct mapping] Solute carrier family 23 member 2
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0008520 [L-ascorbate:sodium symporter activity]
GO:0015229 [L-ascorbic acid transmembrane transporter activity]
GO:0015882 [L-ascorbic acid transmembrane transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0022857 [transmembrane transporter activity]
GO:0055085 [transmembrane transport]
GO:0098590 [plasma membrane region]
Show all
304 aa
32.8 kDa
No 7

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