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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: High
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Medium
Molecular layer cells - cytoplasm/membrane: High
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: High
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Medium
White matter cells - cytoplasm/membrane: Not detected
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:71.0 nTPM
HPA Brain:121.9 nTPM
GTEx:71.0 nTPM
FANTOM5:107.6 Scaled Tags Per Million
Pig:91.0 nTPM
Mouse:105.1 nTPM
Allen mouse:14.4 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002475
Bergmann glia - cytoplasm/membrane Not detected
Bergmann glia - nucleus Not detected
GLUC cells - cytoplasm/membrane High
GLUC cells - nucleus Not detected
Purkinje cells - cytoplasm/membrane High
Purkinje cells - dendrites Not detected
Purkinje cells - nucleus Not detected
Granular cells - cytoplasm/membrane Not detected
Granular cells - nucleus Not detected
Molecular layer - neuropil Medium
Molecular layer cells - cytoplasm/membrane High
Molecular layer cells - nucleus Not detected
Processes in granular layer Not detected
Processes in molecular layer Not detected
Processes in white matter Not detected
Synaptic glomeruli - capsule Not detected
Synaptic glomeruli - core Medium
White matter cells - cytoplasm/membrane Not detected
White matter cells - nucleus Not detected



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

121.9
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 117.8
2101 Male, age 74, right hemisphere 161.0
2055 Female, age 91, right hemisphere 150.0
1774 Male, age 80, left hemisphere 147.7
1769 Male, age 76, right hemisphere 112.9
1768 Female, age 72, unknown 104.5
1788 Male, age 55, unknown 96.4
2006 Male, age 61, right hemisphere 94.1
2003 Female, age 85, right hemisphere 75.7
Cerebellar nuclei
nTPM: 45.1
2318 Male, age 74, left hemisphere 74.8
2882 Male, age 76, left hemisphere 54.9
1966 Female, age 91, left hemisphere 53.5
1879 Male, age 55, unknown 44.3
2005 Male, age 80, left hemisphere 42.9
2177 Female, age 85, both hemispheres 41.5
2175 Male, age 61, right hemisphere 35.9
2783 Female, age 72, unknown 32.8
1871 Male, age 74, unknown 25.7
Flocculonodular lobe
nTPM: 117.6
2176 Female, age 91, right hemisphere 178.8
1771 Male, age 80, left hemisphere 146.9
1835 Female, age 85, right hemisphere 127.9
1767 Male, age 76, left hemisphere 108.3
1792 Male, age 74, unknown 100.6
1765 Male, age 55, unknown 83.9
2004 Male, age 61, right hemisphere 77.0
Vermis
nTPM: 121.9
1751 Male, age 74, right hemisphere 194.5
1778 Female, age 91, left hemisphere 150.2
2834 Male, age 80, left hemisphere 142.8
1988 Female, age 85, left hemisphere 132.7
1928 Female, age 72, unknown 112.0
1766 Male, age 55, unknown 111.4
1770 Male, age 76, left hemisphere 110.4
1825 Male, age 74, unknown 96.8
2460 Male, age 61, both hemispheres 46.7

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.0
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 71.0
Samples: 215

Max nTPM: 145.8
Min nTPM: 31.2
Std nTPM: 20.4
Median nTPM: 68.3
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 145.8
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 126.8
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 125.5
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 124.2
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 123.1
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 121.6
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 112.6
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 112.2
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 110.6
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 110.4
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 109.3
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 109.2
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 109.1
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 108.4
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 105.1
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 104.6
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 104.5
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 104.2
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 101.9
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 101.3
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 100.4
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 98.3
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 97.3
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 96.1
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 95.0
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 94.8
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 94.5
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 93.5
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 93.2
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 92.5
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 92.4
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 92.1
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 92.0
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 91.5
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 91.0
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 89.6
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 89.3
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 87.5
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 87.3
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 87.1
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 86.7
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 86.0
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 85.9
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 85.7
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 85.4
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 85.2
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 85.1
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 84.3
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 83.8
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 83.4
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 83.1
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 83.1
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 82.3
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 82.3
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 82.2
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 82.0
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 81.7
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 81.4
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 80.4
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 80.0
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 79.4
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 79.4
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 78.9
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 78.8
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 78.5
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 78.4
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 78.4
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 78.2
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 78.1
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 77.8
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 77.6
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 77.5
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 77.4
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 77.4
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 77.3
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 77.3
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 77.2
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 76.8
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 76.6
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 76.6
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 76.3
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 75.9
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 75.8
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 75.5
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 75.0
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 74.7
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 74.5
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 74.1
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 74.0
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 73.9
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 73.8
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 73.6
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 73.1
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 73.1
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 73.1
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 72.6
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 72.5
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 72.4
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 72.4
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 72.1
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 72.0
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 71.8
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 71.4
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 70.4
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 70.3
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 69.5
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 69.2
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 68.3
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 68.2
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 68.0
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 68.0
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 67.9
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 67.5
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 67.4
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 67.0
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 66.9
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 66.8
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 66.8
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 66.8
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 66.7
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 66.4
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 66.3
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 66.1
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 65.8
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 65.6
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 65.4
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 65.3
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 65.2
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 64.8
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 64.6
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 64.4
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 64.4
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 64.2
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 64.1
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 63.9
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 63.7
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 63.1
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 62.6
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 61.7
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 61.6
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 61.6
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 61.3
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 60.8
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 60.8
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 60.4
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 60.0
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 59.9
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 59.6
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 59.4
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 59.2
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 59.1
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 58.8
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 58.7
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 58.3
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 58.1
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 57.9
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 56.8
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 56.6
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 56.3
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 56.2
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 56.1
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 56.0
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 55.9
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 55.2
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 54.5
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 54.1
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 54.0
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 53.9
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 53.1
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 52.9
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 52.6
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 52.4
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 52.2
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 52.1
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 51.6
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 51.4
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 50.7
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 50.5
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 50.4
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 49.9
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 49.7
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 49.6
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 49.5
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 49.4
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 49.4
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 49.0
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 48.8
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 48.6
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 48.4
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 48.2
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 48.1
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 47.4
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 46.5
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 46.1
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 45.6
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 44.9
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 44.9
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 44.7
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 44.1
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 43.7
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 43.2
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 43.0
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 42.5
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 41.7
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 41.6
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 40.7
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 40.6
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 40.1
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 39.6
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 38.1
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 37.8
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 37.6
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 36.7
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 36.4
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 31.2
Show allShow less
Brain - Cerebellum
Average nTPM: 61.1
Samples: 241

Max nTPM: 104.6
Min nTPM: 23.4
Std nTPM: 15.5
Median nTPM: 59.6
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 104.6
GTEX-X261-3126-SM-4PQZC 50-59 years, male 101.6
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 100.5
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 98.8
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 98.8
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 97.6
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 96.9
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 94.5
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 94.2
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 93.6
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 91.1
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 89.3
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 88.4
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 88.4
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 87.6
GTEX-15G19-2826-SM-6M48K 60-69 years, male 87.6
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 87.4
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 86.1
GTEX-WL46-2826-SM-3LK81 50-59 years, male 85.7
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 85.4
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 85.1
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 85.0
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 84.5
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 84.3
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 83.7
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 83.4
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 83.2
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 82.9
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 79.8
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 79.2
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 78.6
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 78.6
GTEX-145LS-3026-SM-5O99S 60-69 years, female 77.9
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 77.3
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 76.7
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 76.2
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 76.2
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 76.1
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 75.4
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 75.0
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 74.6
GTEX-17EVP-2926-SM-793BU 40-49 years, male 74.5
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 74.3
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 74.2
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 74.1
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 74.1
GTEX-1192X-3226-SM-5987D 50-59 years, male 73.8
GTEX-13112-2926-SM-5DUWT 50-59 years, male 73.6
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 73.2
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 72.8
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 72.7
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 72.6
GTEX-11EI6-2926-SM-5985U 60-69 years, male 72.4
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 72.3
GTEX-11DYG-2926-SM-5H132 60-69 years, male 72.2
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 72.2
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 72.2
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 72.1
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 71.9
GTEX-14E6D-2926-SM-664OP 50-59 years, male 71.9
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 71.8
GTEX-1B933-3026-SM-731DB 50-59 years, female 71.5
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 71.5
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 71.4
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 71.3
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 70.9
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 70.4
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 70.4
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 70.4
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 70.1
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 69.9
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 69.9
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 69.7
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 69.2
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 69.0
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 69.0
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 69.0
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 68.0
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 67.6
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 66.9
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 66.6
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 66.3
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 66.1
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 65.8
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 65.6
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 65.5
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 65.5
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 65.4
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 65.3
GTEX-14PN4-3026-SM-664O4 50-59 years, male 64.9
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 64.7
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 64.6
GTEX-11ONC-3026-SM-5985W 60-69 years, male 64.4
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 64.2
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 64.2
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 63.8
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 63.5
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 63.4
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 63.4
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 63.4
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 63.2
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 62.7
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 62.7
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 62.4
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 62.2
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 62.0
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 61.6
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 61.4
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 61.4
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 61.4
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 61.3
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 61.3
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 60.4
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 60.4
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 60.3
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 59.9
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 59.9
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 59.9
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 59.9
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 59.6
GTEX-14ABY-3026-SM-664NE 50-59 years, male 59.6
GTEX-18465-2926-SM-7KFSE 50-59 years, male 59.6
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 59.5
GTEX-RU72-2926-SM-2TF66 50-59 years, female 59.5
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 59.3
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 58.8
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 58.8
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 58.5
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 58.1
GTEX-11NUK-3026-SM-5986K 50-59 years, male 58.0
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 58.0
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 58.0
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 57.7
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 57.5
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 56.7
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 56.6
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 55.8
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 55.8
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 55.8
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 55.3
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 54.9
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 54.8
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 54.6
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 54.5
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 54.5
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 54.4
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 54.3
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 54.3
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 54.2
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 54.1
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 54.0
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 53.9
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 53.7
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 53.4
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 53.2
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 53.1
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 53.0
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 52.8
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 52.5
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 52.3
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 52.2
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 52.2
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 52.2
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 52.0
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 51.8
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 51.8
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 51.7
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 51.7
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 51.7
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 51.7
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 51.3
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 51.1
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 51.0
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 50.9
GTEX-12126-0926-SM-5FQTW 20-29 years, male 50.8
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 50.7
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 50.7
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 50.5
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 50.4
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 50.3
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 50.0
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 49.9
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 49.9
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 49.8
GTEX-17HII-2926-SM-79OMK 50-59 years, male 49.8
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 49.8
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 49.7
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 49.3
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 49.2
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 49.1
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 49.1
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 49.1
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 49.1
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 49.0
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 48.8
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 48.6
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 48.4
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 48.4
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 48.4
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 48.2
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 48.1
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 47.7
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 47.6
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 47.5
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 47.2
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 45.1
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 45.1
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 45.0
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 44.9
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 44.3
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 44.3
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 44.2
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 43.8
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 43.6
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 43.3
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 43.1
GTEX-144GL-2926-SM-5O99F 50-59 years, male 42.6
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 42.5
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 42.4
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 42.1
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 42.1
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 41.3
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 40.8
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 40.7
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 40.6
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 40.6
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 40.0
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 40.0
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 39.6
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 39.2
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 37.9
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 37.1
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 36.4
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 36.1
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 35.9
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 33.7
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 30.4
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 29.6
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 27.6
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 24.5
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 23.4
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

107.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 107.6
FF:10166-103B4 76 years, female 136.8
FF:10083-102B2 22-68 years, mixed 78.4

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

91.0
Pig sample Sample description nTPM
Cerebellum
nTPM: 91.0
Samples: 4

Max nTPM: 97.0
Min nTPM: 86.4
Sample A Female 97.0
Sample B Female 90.3
Sample C Male 90.4
Sample D Male 86.4

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105.1
Mouse sample Sample description nTPM
Cerebellum
nTPM: 105.1
Samples: 4

Max nTPM: 117.0
Min nTPM: 99.9
Sample A Male 117.0
Sample B Male 99.9
Sample C Female 101.4
Sample D Female 102.2

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.4
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 14.4
68845556 Antisense, RP_050224_02_A07, Mouse strain C57BL/6J (56 days, male) 19.7
71587899 Antisense, RP_050725_03_G03, Mouse strain C57BL/6J (56 days, male) 9.2

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