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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Bowman's capsule:
Not detected
Cells in glomeruli:
Not detected
Collecting ducts:
Medium
Distal tubules:
Medium
Proximal tubules (cell body):
High
Proximal tubules (microvilli):
Not detected
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1007.8
nTPM
HPA:
1007.8
nTPM
GTEx:
716.5
nTPM
FANTOM5:
887.3
Scaled Tags Per Million
KIDNEY - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA008819
Antibody CAB013493
Antibody CAB080063
Bowman's capsule
-
Not detected
-
Cells in glomeruli
Not detected
Not detected
Not detected
Cells in tubules
High
-
High
Collecting ducts
-
Medium
-
Distal tubules
-
Medium
-
Proximal tubules (cell body)
-
High
-
Proximal tubules (microvilli)
-
Not detected
-
KIDNEY - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1007.8
Female, age 58
Kidney sample 55 nTPM: 995
Cell types%
Cells in tubules:
60
Cells in glomeruli:
20
Fibroblasts:
5
Other cell types:
15
Female, age 67
Kidney sample 56 nTPM: 812.6
Cell types%
Cells in tubules:
70
Cells in glomeruli:
15
Fibroblasts:
10
Other cell types:
5
Female, age 55
Kidney sample 57 nTPM: 761.1
Cell types%
Cells in tubules:
80
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
5
Male, age 46
Kidney sample 58 nTPM: 850.6
Cell types%
Cells in tubules:
60
Cells in glomeruli:
25
Fibroblasts:
5
Other cell types:
10
Female, age 57
Kidney sample 358 nTPM: 1046.8
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Male, age 78
Kidney sample 377 nTPM: 958.8
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
20
Male, age 73
Kidney sample 380 nTPM: 1885.4
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Female, age 59
Kidney sample 394 nTPM: 935.8
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
15
Female, age 48
Kidney sample 414 nTPM: 824.3
Cell types%
Cells in tubules:
60
Cells in glomeruli:
5
Fibroblasts:
10
Other cell types:
25
KIDNEY - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
716.5
GTEx sample id
Sample description
nTPM
Kidney - Cortex Average nTPM: 597.1
Samples: 85
Max nTPM: 1798.5
Min nTPM: 164.6
Std nTPM: 327.3
Median nTPM: 514.9
GTEX-14E6D-2526-SM-5YYA9
50-59 years, male
1798.5
GTEX-T6MN-1826-SM-EXOHN
50-59 years, male
1778.7
GTEX-13NYB-1726-SM-5N9G2
40-49 years, male
1737.8
GTEX-ZYT6-2226-SM-5GIC9
30-39 years, male
1378.1
GTEX-1JMQJ-1726-SM-E9U4V
50-59 years, male
1341.2
GTEX-1KWVE-0826-SM-CXZKO
30-39 years, male
1014.0
GTEX-11OF3-1326-SM-5N9FJ
60-69 years, male
1004.9
GTEX-14C5O-2026-SM-5YYB1
60-69 years, male
985.8
GTEX-13OVL-1826-SM-5KLZR
50-59 years, male
970.9
GTEX-T5JC-1526-SM-4DM68
20-29 years, male
949.6
GTEX-1NV8Z-2226-SM-EXOJ2
60-69 years, male
927.5
GTEX-1JMPZ-1226-SM-ARU8Y
30-39 years, male
911.8
GTEX-13112-2126-SM-5GCO4
50-59 years, male
901.8
GTEX-17HHY-2326-SM-7KFSR
50-59 years, male
895.5
GTEX-13OW6-1826-SM-5N9F9
50-59 years, male
838.4
GTEX-O5YV-1226-SM-EV795
60-69 years, female
812.7
GTEX-REY6-1826-SM-EAZAT
60-69 years, male
778.3
GTEX-P4QS-1126-SM-3NMD5
60-69 years, male
724.7
GTEX-1K9T9-1826-SM-CXZK2
50-59 years, female
723.3
GTEX-15CHQ-2126-SM-6871M
60-69 years, male
720.0
GTEX-ZDXO-0226-SM-4WKH7
60-69 years, male
709.8
GTEX-1GMR3-2426-SM-7MXV2
40-49 years, male
689.5
GTEX-1OJC4-2326-SM-DTXA5
50-59 years, female
689.0
GTEX-1BAJH-1826-SM-731DA
70-79 years, male
673.2
GTEX-Y5V5-1226-SM-EYYVP
60-69 years, female
662.9
GTEX-Y5V6-2026-SM-5IFHO
60-69 years, male
660.9
GTEX-1497J-0826-SM-5NQAJ
60-69 years, male
655.0
GTEX-15DYW-2026-SM-6AJBD
60-69 years, female
622.3
GTEX-1GF9V-1926-SM-9JGHE
60-69 years, male
621.7
GTEX-1IKK5-0926-SM-A9G2U
60-69 years, male
614.6
GTEX-1R9PO-1626-SM-E6CPT
60-69 years, female
612.6
GTEX-16MT8-1926-SM-7EPGL
60-69 years, female
582.4
GTEX-1H3NZ-2126-SM-9WPQ6
60-69 years, male
579.7
GTEX-1QP6S-1526-SM-EXUSG
40-49 years, male
579.6
GTEX-QDT8-1726-SM-EYYV6
30-39 years, female
566.6
GTEX-17F96-1926-SM-7MGWY
70-79 years, male
559.1
GTEX-S33H-1426-SM-EZ6L7
30-39 years, male
552.8
GTEX-1GF9W-1326-SM-7P8PX
60-69 years, male
549.5
GTEX-1HBPI-2026-SM-CE6RZ
50-59 years, male
546.9
GTEX-QDVN-1626-SM-48TZC
50-59 years, male
532.3
GTEX-12696-0926-SM-5FQTV
60-69 years, male
531.0
GTEX-1HCU7-1826-SM-A9G2A
50-59 years, male
528.8
GTEX-ZC5H-1726-SM-5HL7X
40-49 years, female
514.9
GTEX-1JJ6O-2526-SM-AHZ3J
60-69 years, male
507.9
GTEX-1J1OQ-1426-SM-AHZ3P
40-49 years, female
483.1
GTEX-12WSG-0826-SM-5EQ5A
50-59 years, female
479.4
GTEX-1EKGG-2226-SM-7IGOA
60-69 years, male
478.6
GTEX-145MN-0326-SM-5QGQI
30-39 years, male
478.3
GTEX-1HB9E-1826-SM-D4P33
50-59 years, male
475.9
GTEX-1C6VQ-2326-SM-7IGN1
50-59 years, male
474.3
GTEX-14C39-2126-SM-664OH
40-49 years, male
468.3
GTEX-ZYFG-1626-SM-5GZYY
60-69 years, female
467.5
GTEX-NPJ8-2226-SM-3TW8D
40-49 years, male
464.7
GTEX-1JMQK-1926-SM-CJI3B
60-69 years, male
452.6
GTEX-1PWST-2226-SM-EVR3G
70-79 years, male
446.4
GTEX-1I1GP-1926-SM-CNNQU
50-59 years, male
445.1
GTEX-1E2YA-1626-SM-7MGXS
50-59 years, male
436.2
GTEX-1IL2V-1826-SM-ARU7R
70-79 years, male
430.2
GTEX-XPVG-0526-SM-4B65N
50-59 years, male
417.4
GTEX-13RTJ-2226-SM-5S2Q1
60-69 years, male
412.6
GTEX-1A8FM-2026-SM-7P8RN
50-59 years, female
408.0
GTEX-1GTWX-1826-SM-9QEHG
60-69 years, male
407.3
GTEX-1GN1U-2126-SM-AHZ4J
50-59 years, female
389.6
GTEX-1JMLX-1526-SM-AHZ3N
50-59 years, male
389.3
GTEX-RN64-1626-SM-48FD7
50-59 years, male
388.3
GTEX-ZLFU-0926-SM-5P9F8
40-49 years, male
373.1
GTEX-11GS4-2326-SM-5A5KS
60-69 years, male
357.7
GTEX-1LG7Y-2726-SM-D5OVW
50-59 years, male
352.4
GTEX-1N2EF-1426-SM-EXUSH
60-69 years, male
352.2
GTEX-1CB4J-1926-SM-7MGX8
60-69 years, male
344.4
GTEX-1N2DW-1826-SM-EAZ54
50-59 years, male
338.9
GTEX-1MUQO-2526-SM-E9TJN
60-69 years, male
325.6
GTEX-147F4-2626-SM-5Q5CS
50-59 years, male
318.6
GTEX-13O1R-2526-SM-5N9FW
60-69 years, male
311.6
GTEX-13OVI-1126-SM-5KLZF
60-69 years, female
309.5
GTEX-1F48J-2226-SM-7MXTN
50-59 years, female
300.5
GTEX-ZVZP-0926-SM-5GIDB
50-59 years, male
298.5
GTEX-1H3VY-1926-SM-9JGHJ
50-59 years, male
278.1
GTEX-11TTK-1926-SM-5PNW8
60-69 years, female
271.0
GTEX-17F97-1926-SM-7IGM4
50-59 years, male
266.8
GTEX-ZE9C-1426-SM-4WKGM
60-69 years, male
260.0
GTEX-1AX8Z-2326-SM-731CR
60-69 years, male
252.2
GTEX-QLQW-1626-SM-CMKFE
30-39 years, male
235.0
GTEX-1399S-0526-SM-5IJG8
30-39 years, female
217.0
GTEX-1A3MW-2226-SM-73KUX
60-69 years, female
164.6
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Kidney - Medulla Average nTPM: 716.5
Samples: 4
Max nTPM: 1059.3
Min nTPM: 479.3
Std nTPM: 215.1
Median nTPM: 663.6
GTEX-R55E-2026-SM-EZ6L1
20-29 years, male
1059.3
GTEX-T5JC-1626-SM-EZ6KW
20-29 years, male
717.8
GTEX-RU72-1926-SM-EAZ3F
50-59 years, female
609.4
GTEX-TKQ2-0626-SM-EZ6LB
50-59 years, male
479.3
KIDNEY - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
