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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:67.8 nTPM
HPA Brain:77.2 nTPM
GTEx:67.8 nTPM
FANTOM5:233.4 Scaled Tags Per Million
Pig:72.8 nTPM
Mouse:203.2 nTPM
Allen mouse:9.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA008784Antibody CAB033036Antibody CAB058691
Glial cells HighHighHigh
Neuronal cells HighHighHigh






BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 75.3
2481 Female, age 94, left hemisphere 96.6
2846 Female, age 79, unknown 81.7
1854 Male, age 80, left hemisphere 78.7
1857 Female, age 85, left hemisphere 78.5
2290 Female, age 72, unknown 74.7
1781 Male, age 74, unknown 68.5
2288 Male, age 75, left hemisphere 68.3
2289 Male, age 61, right hemisphere 55.4
Globus pallidus, externus
nTPM: 56.8
2772 Female, age 79, unknown 76.5
1996 Male, age 80, right hemisphere 60.1
2395 Male, age 75, both hemispheres 56.5
2646 Male, age 61, right hemisphere 55.4
2567 Female, age 72, unknown 35.7
Globus pallidus, internus
nTPM: 61.9
2483 Female, age 94, right hemisphere 83.2
2287 Male, age 75, right hemisphere 83.0
2778 Female, age 91, both hemispheres 69.7
1818 Male, age 74, unknown 59.5
2037 Male, age 80, right hemisphere 48.9
2566 Female, age 72, unknown 47.9
2111 Female, age 85, right hemisphere 41.4
Nucleus accumbens
nTPM: 77.2
1856 Female, age 91, right hemisphere 99.7
2698 Female, age 72, unknown 89.7
2391 Female, age 94, left hemisphere 82.6
2286 Male, age 75, left hemisphere 77.1
2824 Male, age 61, right hemisphere 75.1
1783 Male, age 74, unknown 74.9
1806 Female, age 85, left hemisphere 68.7
2732 Male, age 80, right hemisphere 49.8
Nucleus basalis of Meynert
nTPM: 64.4
2821 Male, age 75, both hemispheres 73.6
2393 Male, age 80, right hemisphere 66.5
2569 Male, age 61, both hemispheres 59.0
2484 Female, age 94, left hemisphere 58.5
Nucleus of the diagonal band
nTPM: 73.7
1812 Female, age 91, both hemispheres 86.1
2775 Male, age 80, right hemisphere 81.7
1979 Male, age 74, unknown 72.8
2195 Female, age 85, both hemispheres 64.1
2029 Male, age 61, right hemisphere 63.6
Putamen
nTPM: 70.1
1838 Male, age 80, right hemisphere 86.5
2482 Female, age 94, left hemisphere 80.8
1829 Male, age 74, unknown 74.7
1937 Female, age 91, right hemisphere 73.9
2466 Female, age 79, unknown 73.8
2647 Male, age 75, left hemisphere 55.0
2489 Female, age 72, unknown 45.8
Septal nuclei
nTPM: 66.8
2031 Female, age 72, unknown 72.2
2199 Male, age 80, right hemisphere 70.1
1960 Male, age 74, unknown 69.9
2629 Female, age 94, right hemisphere 69.7
2009 Female, age 91, both hemispheres 65.3
2059 Female, age 85, both hemispheres 64.9
2394 Male, age 61, left hemisphere 55.2
Stria terminalis, bed nucleus
nTPM: 64.1
1974 Female, age 91, both hemispheres 77.6
2486 Female, age 94, both hemispheres 59.8
2201 Male, age 74, unknown 54.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 66.5
Samples: 246

Max nTPM: 115.6
Min nTPM: 18.3
Std nTPM: 18.4
Median nTPM: 66.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 115.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 111.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 102.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 101.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 101.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 101.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 100.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 100.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 100.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 99.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 99.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 99.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 97.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 94.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 94.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 93.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 93.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 93.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 93.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 92.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 92.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 92.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 92.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 92.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 92.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 91.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 91.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 91.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 90.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 90.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 89.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 89.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 88.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 88.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 87.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 86.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 86.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 86.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 86.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 85.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 85.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 85.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 85.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 84.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 84.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 83.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 83.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 83.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 83.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 83.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 83.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 82.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 82.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 82.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 82.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 82.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 81.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 81.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 81.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 81.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 81.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 81.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 80.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 80.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 80.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 79.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 79.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 79.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 79.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 78.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 78.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 78.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 78.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 77.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 77.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 77.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 77.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 77.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 77.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 76.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 75.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 75.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 75.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 73.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 73.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 73.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 72.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 72.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 72.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 72.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 71.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 71.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 70.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 70.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 70.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 70.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 70.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 70.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 70.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 70.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 70.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 69.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 69.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 69.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 69.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 69.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 68.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 68.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 68.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 68.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 68.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 68.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 68.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 68.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 68.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 67.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 67.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 67.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 67.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 67.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 67.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 67.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 66.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 66.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 66.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 65.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 65.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 65.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 65.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 65.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 65.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 65.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 64.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 64.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 64.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 63.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 63.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 63.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 63.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 62.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 62.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 62.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 62.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 61.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 61.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 60.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 60.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 60.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 60.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 60.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 59.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 59.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 59.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 59.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 58.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 58.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 58.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 58.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 58.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 58.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 57.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 57.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 57.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 57.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 56.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 56.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 56.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 55.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 55.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 55.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 55.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 55.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 54.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 54.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 54.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 54.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 54.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 54.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 54.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 54.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 54.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 53.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 53.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 53.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 53.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 53.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 53.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 52.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 52.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 52.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 52.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 52.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 52.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 51.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 51.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 50.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 50.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 50.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 50.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 49.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 49.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 49.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 49.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 49.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 49.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 48.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 47.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 47.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 47.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 46.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 46.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 46.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 45.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 45.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 45.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 44.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 44.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 43.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 43.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 42.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 41.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 41.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 41.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 41.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 40.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 40.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 39.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 39.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 38.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 38.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 38.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 37.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 37.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 36.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 36.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 36.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 35.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 35.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 35.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 34.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 34.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 34.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 33.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 23.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 19.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 18.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 67.6
Samples: 246

Max nTPM: 113.9
Min nTPM: 7.5
Std nTPM: 20.5
Median nTPM: 69.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 113.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 112.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 111.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 109.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 108.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 108.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 105.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 102.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 101.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 101.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 101.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 99.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 97.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 97.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 96.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 95.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 95.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 95.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 93.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 93.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 93.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 92.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 92.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 92.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 91.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 91.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 91.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 91.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 90.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 90.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 90.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 89.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 89.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 89.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 88.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 88.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 88.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 88.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 88.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 88.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 87.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 87.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 87.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 87.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 87.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 86.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 86.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 86.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 86.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 86.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 85.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 85.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 85.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 85.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 85.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 84.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 84.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 84.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 84.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 84.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 83.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 83.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 83.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 83.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 83.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 83.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 82.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 82.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 82.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 82.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 82.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 81.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 81.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 80.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 80.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 79.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 79.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 79.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 79.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 78.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 78.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 78.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 77.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 77.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 77.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 77.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 77.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 77.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 77.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 76.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 76.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 76.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 76.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 75.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 75.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 75.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 75.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 75.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 74.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 74.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 74.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 74.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 74.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 73.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 73.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 72.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 72.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 72.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 72.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 72.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 72.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 71.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 71.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 71.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 71.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 71.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 70.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 69.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 69.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 69.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 69.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 69.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 69.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 69.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 69.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 68.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 68.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 68.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 68.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 67.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 67.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 66.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 66.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 66.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 66.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 66.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 66.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 66.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 65.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 65.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 65.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 65.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 64.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 64.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 64.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 64.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 63.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 62.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 62.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 62.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 62.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 61.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 61.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 61.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 61.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 61.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 61.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 61.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 61.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 60.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 60.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 60.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 60.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 59.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 59.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 59.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 59.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 58.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 58.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 58.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 57.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 57.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 57.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 55.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 55.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 54.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 54.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 54.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 54.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 54.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 53.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 53.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 53.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 53.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 53.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 52.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 51.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 51.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 50.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 49.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 48.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 48.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 48.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 48.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 47.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 47.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 47.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 47.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 47.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 47.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 46.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 46.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 46.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 46.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 45.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 44.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 44.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 44.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 44.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 44.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 43.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 43.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 43.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 43.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 43.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 41.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 41.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 41.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 41.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 41.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 40.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 39.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 39.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 38.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 38.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 38.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 38.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 35.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 35.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 35.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 35.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 34.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 34.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 33.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 32.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 31.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 31.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 31.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 30.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 29.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 25.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 25.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 22.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 22.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 14.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 7.5
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Brain - Putamen (basal ganglia)
Average nTPM: 67.8
Samples: 205

Max nTPM: 121.7
Min nTPM: 23.2
Std nTPM: 18.5
Median nTPM: 66.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 121.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 119.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 114.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 108.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 103.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 102.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 102.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 102.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 101.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 101.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 100.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 100.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 99.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 98.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 96.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 94.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 93.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 93.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 93.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 92.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 91.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 91.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 91.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 90.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 89.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 89.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 89.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 89.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 88.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 88.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 88.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 87.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 87.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 87.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 87.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 86.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 85.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 84.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 84.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 83.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 82.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 82.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 82.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 82.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 81.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 80.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 80.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 80.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 79.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 79.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 79.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 79.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 78.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 78.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 78.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 77.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 77.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 77.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 77.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 76.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 76.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 76.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 76.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 76.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 76.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 76.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 75.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 75.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 75.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 75.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 75.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 74.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 74.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 74.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 74.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 73.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 73.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 73.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 73.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 73.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 73.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 72.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 72.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 72.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 71.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 71.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 71.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 70.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 70.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 69.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 69.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 69.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 68.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 68.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 68.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 68.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 67.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 67.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 67.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 67.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 67.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 67.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 66.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 66.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 66.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 65.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 65.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 65.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 65.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 64.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 64.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 64.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 64.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 64.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 64.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 63.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 63.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 63.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 63.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 63.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 63.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 62.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 62.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 62.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 62.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 62.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 62.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 62.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 61.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 61.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 61.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 60.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 60.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 60.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 59.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 59.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 59.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 59.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 58.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 58.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 58.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 58.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 58.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 58.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 58.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 57.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 57.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 57.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 57.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 56.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 56.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 56.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 56.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 56.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 55.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 55.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 55.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 55.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 55.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 54.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 53.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 53.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 53.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 52.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 52.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 51.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 51.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 51.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 51.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 51.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 50.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 50.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 50.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 49.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 48.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 48.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 47.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 47.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 47.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 46.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 46.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 45.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 45.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 44.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 44.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 43.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 43.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 42.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 41.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 41.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 40.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 38.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 37.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 37.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 36.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 36.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 36.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 36.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 31.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 31.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 30.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 30.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 30.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 26.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 23.2
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

233.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 167.7
FF:10164-103B2 76 years, female 167.7
Nucleus accumbens
Scaled Tags Per Million: 233.4
FF:10037-101F1 23-56 years, mixed 233.4
Putamen
Scaled Tags Per Million: 227.6
FF:10176-103C5 60 years, female 227.6
Globus pallidus
Scaled Tags Per Million: 200.3
FF:10175-103C4 60 years, female 235.4
FF:10161-103A8 76 years, female 165.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.8
Pig sample Sample description nTPM
Caudate
nTPM: 65.9
Samples: 4

Max nTPM: 77.3
Min nTPM: 53.8
Sample A Female 61.3
Sample B Female 71.1
Sample C Male 77.3
Sample D Male 53.8
Putamen
nTPM: 72.8
Samples: 4

Max nTPM: 83.2
Min nTPM: 63.1
Sample A Female 75.5
Sample B Female 63.1
Sample C Male 83.2
Sample D Male 69.4
Septum
nTPM: 65.9
Samples: 4

Max nTPM: 75.5
Min nTPM: 58.0
Sample A Female 75.5
Sample B Female 67.1
Sample C Male 63.0
Sample D Male 58.0
Ventral pallidum
nTPM: 69.6
Samples: 4

Max nTPM: 76.7
Min nTPM: 65.5
Sample A Female 67.0
Sample B Female 76.7
Sample C Male 69.3
Sample D Male 65.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

203.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 203.2
Samples: 4

Max nTPM: 221.8
Min nTPM: 183.8
Sample A Male 221.8
Sample B Male 209.0
Sample C Female 198.3
Sample D Female 183.8
Septum
nTPM: 200.0
Samples: 4

Max nTPM: 209.6
Min nTPM: 189.5
Sample A Male 209.6
Sample B Male 206.1
Sample C Female 189.5
Sample D Female 194.6
Ventral forebrain
nTPM: 188.5
Samples: 4

Max nTPM: 194.4
Min nTPM: 174.6
Sample A Male 192.4
Sample B Male 192.4
Sample C Female 174.6
Sample D Female 194.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 9.0
68301512 Antisense, RP_041130_01_D05, Mouse strain C57BL/6J (56 days, male) 18.0
69527830 Antisense, RP_050421_02_E08, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 7.8
68301512 Antisense, RP_041130_01_D05, Mouse strain C57BL/6J (56 days, male) 15.5
69527830 Antisense, RP_050421_02_E08, Mouse strain C57BL/6J (56 days, male) 0.0

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