We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
FXYD3
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • FXYD3
TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:552.4 nTPM
HPA:460.5 nTPM
GTEx:552.4 nTPM
FANTOM5:790.7 Scaled Tags Per Million

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA010856
Glandular cells Medium



SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

460.5
overview
Female, age 68
Salivary gland sample 216
nTPM: 286.7
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 585.8
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 509.1
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

552.4
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 552.4
Samples: 162

Max nTPM: 1102.4
Min nTPM: 112.2
Std nTPM: 190.6
Median nTPM: 541.1
GTEX-X261-2426-SM-4PQZU 50-59 years, male 1102.4
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 1048.2
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 1019.5
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 981.7
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 975.2
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 954.0
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 919.0
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 894.8
GTEX-Y111-2626-SM-4TT24 50-59 years, male 893.3
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 875.9
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 867.7
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 819.6
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 817.0
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 808.0
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 807.0
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 790.0
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 783.3
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 782.2
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 781.5
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 777.8
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 773.0
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 769.9
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 759.1
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 745.8
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 745.5
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 735.9
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 735.7
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 728.9
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 727.6
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 721.2
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 718.0
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 712.8
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 708.4
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 707.0
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 700.3
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 695.5
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 694.6
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 693.0
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 688.2
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 678.9
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 678.4
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 678.2
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 676.2
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 675.4
GTEX-1R9PM-1726-SM-E8VOA 20-29 years, male 670.9
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 665.8
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 663.1
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 658.9
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 658.8
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 658.7
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 657.6
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 642.8
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 628.6
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 626.5
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 624.3
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 620.3
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 619.6
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 619.2
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 617.5
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 612.2
GTEX-11P82-0926-SM-5986X 20-29 years, male 607.4
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 598.6
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 595.3
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 590.4
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 589.5
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 588.4
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 586.0
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 582.9
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 580.5
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 580.1
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 579.1
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 577.1
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 575.2
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 575.0
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 572.4
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 565.7
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 556.7
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 554.8
GTEX-1445S-2926-SM-5O993 60-69 years, male 551.6
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 543.3
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 541.1
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 541.0
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 540.7
GTEX-15SHV-2226-SM-6M464 60-69 years, male 536.3
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 535.3
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 531.4
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 530.2
GTEX-WOFM-2126-SM-4OOSR 20-29 years, male 529.3
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 517.7
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 514.4
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 513.4
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 510.3
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 505.0
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 504.5
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 500.3
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 492.1
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 485.7
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 484.8
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 483.5
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 479.2
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 475.7
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 472.6
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 468.3
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 467.9
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 461.6
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 461.5
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 460.8
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 457.8
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 456.7
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 454.5
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 453.5
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 450.5
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 445.1
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 441.5
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 438.3
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 437.0
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 430.6
GTEX-ZQG8-2126-SM-4YCF1 60-69 years, female 429.9
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 422.4
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 418.0
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 417.8
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 414.6
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 411.7
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 404.3
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 395.9
GTEX-178AV-1426-SM-6LLID 40-49 years, male 392.0
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 388.6
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 384.1
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 382.4
GTEX-146FR-1226-SM-5SIA7 60-69 years, female 376.0
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 374.0
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 374.0
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 371.6
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 366.6
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 364.0
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 362.2
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 360.1
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 360.0
GTEX-13O21-1926-SM-5MR39 50-59 years, male 354.9
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 354.4
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 353.6
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 352.6
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 347.7
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 341.5
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 319.0
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 314.3
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 306.6
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 301.0
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 301.0
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 290.5
GTEX-13113-1526-SM-5EGHV 60-69 years, female 285.8
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 280.1
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 273.9
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 267.6
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 260.5
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 260.0
GTEX-1B932-0626-SM-731EM 40-49 years, female 230.0
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 219.1
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 215.3
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 172.4
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 151.5
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 112.2
Show allShow less

SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

790.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 781.6
FF:10199-103F1 23 years, male 781.6
Salivary gland
Scaled Tags Per Million: 790.7
FF:10093-102C3 16-60 years, mixed 790.7
Submaxillary gland
Scaled Tags Per Million: 389.9
FF:10202-103F4 24 years, male 389.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org