We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
NECAP1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • NECAP1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:36.2 nTPM
HPA Brain:70.8 nTPM
GTEx:36.2 nTPM
FANTOM5:234.5 Scaled Tags Per Million
Pig:98.1 nTPM
Mouse:212.5 nTPM
Allen mouse:6.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA063300
Glial cells Not detected
Neuronal cells Not detected

BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 35.1
2288 Male, age 75, left hemisphere 45.2
1781 Male, age 74, unknown 39.2
2290 Female, age 72, unknown 37.9
2846 Female, age 79, unknown 36.2
1857 Female, age 85, left hemisphere 35.5
1854 Male, age 80, left hemisphere 33.4
2481 Female, age 94, left hemisphere 32.2
2289 Male, age 61, right hemisphere 20.9
Globus pallidus, externus
nTPM: 12.6
2772 Female, age 79, unknown 23.8
2395 Male, age 75, both hemispheres 14.2
1996 Male, age 80, right hemisphere 13.0
2646 Male, age 61, right hemisphere 7.3
2567 Female, age 72, unknown 4.9
Globus pallidus, internus
nTPM: 14.7
2287 Male, age 75, right hemisphere 28.7
2483 Female, age 94, right hemisphere 25.8
1818 Male, age 74, unknown 17.1
2778 Female, age 91, both hemispheres 11.8
2037 Male, age 80, right hemisphere 10.3
2111 Female, age 85, right hemisphere 5.9
2566 Female, age 72, unknown 3.5
Nucleus accumbens
nTPM: 39.9
1856 Female, age 91, right hemisphere 66.0
2824 Male, age 61, right hemisphere 51.9
1783 Male, age 74, unknown 39.8
1806 Female, age 85, left hemisphere 39.7
2286 Male, age 75, left hemisphere 38.3
2698 Female, age 72, unknown 36.5
2732 Male, age 80, right hemisphere 25.5
2391 Female, age 94, left hemisphere 21.7
Nucleus basalis of Meynert
nTPM: 25.9
2821 Male, age 75, both hemispheres 42.6
2484 Female, age 94, left hemisphere 28.2
2393 Male, age 80, right hemisphere 26.7
2569 Male, age 61, both hemispheres 6.2
Nucleus of the diagonal band
nTPM: 65.3
1812 Female, age 91, both hemispheres 89.8
2775 Male, age 80, right hemisphere 75.1
2029 Male, age 61, right hemisphere 61.0
2195 Female, age 85, both hemispheres 59.5
1979 Male, age 74, unknown 41.3
Putamen
nTPM: 28.4
1937 Female, age 91, right hemisphere 48.7
2466 Female, age 79, unknown 44.9
1838 Male, age 80, right hemisphere 30.9
2482 Female, age 94, left hemisphere 27.7
1829 Male, age 74, unknown 24.9
2647 Male, age 75, left hemisphere 13.4
2489 Female, age 72, unknown 8.4
Septal nuclei
nTPM: 58.3
2031 Female, age 72, unknown 101.0
1960 Male, age 74, unknown 83.4
2009 Female, age 91, both hemispheres 71.2
2629 Female, age 94, right hemisphere 63.2
2059 Female, age 85, both hemispheres 49.0
2199 Male, age 80, right hemisphere 21.4
2394 Male, age 61, left hemisphere 18.8
Stria terminalis, bed nucleus
nTPM: 70.8
1974 Female, age 91, both hemispheres 92.6
2486 Female, age 94, both hemispheres 73.3
2201 Male, age 74, unknown 46.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 24.6
Samples: 246

Max nTPM: 87.0
Min nTPM: 3.0
Std nTPM: 13.6
Median nTPM: 20.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 87.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 75.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 68.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 63.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 60.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 56.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 56.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 54.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 53.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 53.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 52.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 52.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 51.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 50.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 50.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 49.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 49.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 49.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 47.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 47.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 47.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 46.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 46.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 45.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 45.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 45.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 44.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 44.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 43.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 42.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 41.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 41.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 41.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 40.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 40.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 40.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 39.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 38.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 38.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 37.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 37.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 36.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 36.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 36.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 35.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 35.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 34.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 34.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 34.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 33.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 33.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 33.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 32.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 32.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 32.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 32.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 31.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 31.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 31.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 30.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 30.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 30.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 30.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 30.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 30.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 30.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 29.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 29.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 29.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 29.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 29.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 28.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 28.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 28.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 28.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 28.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 28.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 27.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 27.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 27.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 27.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 27.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 26.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 26.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 26.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 26.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 26.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 26.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 26.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 26.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 26.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 26.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 26.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 25.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 25.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 25.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 25.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 25.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 25.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 24.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 24.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 24.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 23.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 23.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 23.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 23.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 23.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 23.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 22.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 22.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 22.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 22.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 22.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 22.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 22.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 21.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 21.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 21.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 21.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 21.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 21.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 21.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 20.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 20.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 20.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 20.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 20.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 20.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 20.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 20.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 19.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 19.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 19.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 19.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 19.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 19.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 19.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 19.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 19.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 19.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 18.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 18.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 18.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 18.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 18.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 18.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 18.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 18.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 18.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 18.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 18.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 18.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 18.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 17.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 17.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 17.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 17.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 17.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 17.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 17.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 17.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 16.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 16.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 16.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 16.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 16.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 16.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 16.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 16.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 16.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 16.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 16.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 16.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 16.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 16.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 16.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 15.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 15.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 15.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 15.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 15.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 15.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 14.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 14.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 14.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 14.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 14.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 14.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 14.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 14.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 14.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 14.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 13.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 13.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 13.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 13.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 13.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 13.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 13.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 13.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 13.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 13.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 13.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 13.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 13.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 13.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 13.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 13.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 12.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 12.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 12.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 11.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 11.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 11.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 11.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 11.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 11.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 11.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 11.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 11.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 11.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 10.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 10.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 10.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 10.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 10.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 10.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 10.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 9.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 9.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 9.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 9.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 9.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 9.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 8.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 8.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 8.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 8.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 7.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 7.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 7.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 7.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 5.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 5.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 5.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 3.0
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 36.2
Samples: 246

Max nTPM: 87.4
Min nTPM: 5.2
Std nTPM: 20.9
Median nTPM: 33.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 87.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 85.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 82.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 81.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 80.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 80.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 80.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 78.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 77.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 76.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 76.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 76.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 73.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 73.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 73.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 71.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 71.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 68.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 68.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 67.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 67.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 67.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 66.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 66.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 66.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 66.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 66.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 65.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 64.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 64.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 63.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 63.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 63.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 63.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 62.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 62.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 62.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 62.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 61.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 60.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 60.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 60.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 60.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 60.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 59.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 59.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 58.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 58.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 58.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 57.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 57.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 57.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 56.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 55.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 55.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 55.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 55.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 54.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 52.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 52.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 51.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 50.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 50.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 50.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 50.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 49.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 49.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 49.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 49.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 49.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 48.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 48.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 48.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 47.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 47.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 46.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 46.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 46.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 45.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 45.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 44.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 44.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 43.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 43.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 43.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 43.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 43.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 43.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 43.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 42.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 42.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 42.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 42.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 41.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 41.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 40.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 40.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 40.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 40.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 40.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 39.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 38.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 38.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 38.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 38.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 37.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 37.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 37.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 36.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 36.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 35.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 35.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 35.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 35.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 35.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 35.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 34.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 34.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 34.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 33.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 33.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 33.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 33.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 32.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 32.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 32.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 32.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 32.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 31.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 31.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 31.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 31.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 30.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 30.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 30.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 30.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 30.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 29.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 29.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 29.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 28.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 28.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 28.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 28.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 28.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 27.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 27.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 27.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 27.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 27.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 26.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 25.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 25.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 24.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 24.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 24.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 24.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 24.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 24.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 23.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 23.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 23.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 23.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 22.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 22.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 22.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 22.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 21.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 21.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 21.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 21.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 21.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 21.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 20.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 19.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 19.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 19.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 19.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 18.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 18.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 18.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 18.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 18.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 17.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 17.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 17.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 16.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 16.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 15.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 15.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 15.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 15.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 15.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 15.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 14.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 14.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 14.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 14.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 14.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 14.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 14.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 14.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 14.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 14.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 13.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 13.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 13.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 12.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 12.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 12.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 12.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 12.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 12.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 11.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 11.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 11.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 11.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 11.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 11.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 11.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 11.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 11.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 10.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 10.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 10.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 10.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 10.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 10.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 9.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 9.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 9.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 9.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 9.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 9.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 8.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 8.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 8.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 7.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 7.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 7.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 7.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 6.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 6.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 6.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 5.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 5.2
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 20.7
Samples: 205

Max nTPM: 56.0
Min nTPM: 3.4
Std nTPM: 10.4
Median nTPM: 18.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 56.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 53.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 46.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 45.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 44.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 44.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 44.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 43.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 43.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 40.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 40.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 40.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 40.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 39.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 39.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 36.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 36.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 36.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 36.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 36.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 36.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 36.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 35.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 35.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 34.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 33.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 33.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 33.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 33.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 32.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 32.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 32.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 32.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 31.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 31.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 31.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 31.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 30.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 30.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 30.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 30.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 30.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 30.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 29.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 29.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 29.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 28.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 27.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 27.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 27.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 27.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 27.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 26.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 26.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 26.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 26.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 25.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 25.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 25.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 25.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 25.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 25.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 24.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 24.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 24.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 24.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 24.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 23.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 23.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 23.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 22.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 22.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 22.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 22.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 22.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 22.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 22.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 22.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 22.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 22.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 21.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 21.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 21.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 21.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 21.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 20.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 20.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 20.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 19.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 19.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 19.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 19.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 19.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 19.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 19.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 19.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 18.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 18.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 18.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 18.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 18.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 18.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 18.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 17.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 17.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 17.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 17.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 17.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 17.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 17.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 17.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 17.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 16.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 16.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 16.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 16.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 16.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 15.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 15.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 15.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 15.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 15.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 15.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 15.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 15.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 15.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 15.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 15.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 15.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 15.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 15.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 14.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 14.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 14.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 14.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 14.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 14.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 14.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 14.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 14.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 14.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 13.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 13.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 13.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 13.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 13.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 13.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 13.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 13.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 12.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 12.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 12.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 12.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 12.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 12.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 12.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 11.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 11.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 11.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 11.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 11.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 11.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 11.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 11.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 11.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 11.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 11.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 11.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 11.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 11.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 11.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 10.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 10.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 10.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 10.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 10.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 10.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 10.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 10.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 10.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 10.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 10.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 9.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 9.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 9.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 9.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 9.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 9.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 8.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 8.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 8.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 8.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 8.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 8.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 7.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 7.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 7.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 7.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 7.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 6.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 6.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 5.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 5.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 4.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 3.4
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

234.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 113.6
FF:10164-103B2 76 years, female 113.6
Nucleus accumbens
Scaled Tags Per Million: 234.5
FF:10037-101F1 23-56 years, mixed 234.5
Putamen
Scaled Tags Per Million: 211.1
FF:10176-103C5 60 years, female 211.1
Globus pallidus
Scaled Tags Per Million: 90.9
FF:10175-103C4 60 years, female 134.9
FF:10161-103A8 76 years, female 47.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

98.1
Pig sample Sample description nTPM
Caudate
nTPM: 83.2
Samples: 4

Max nTPM: 95.2
Min nTPM: 73.4
Sample A Female 78.3
Sample B Female 85.7
Sample C Male 95.2
Sample D Male 73.4
Putamen
nTPM: 85.8
Samples: 4

Max nTPM: 118.2
Min nTPM: 69.3
Sample A Female 69.3
Sample B Female 73.0
Sample C Male 118.2
Sample D Male 82.6
Septum
nTPM: 98.1
Samples: 4

Max nTPM: 127.9
Min nTPM: 83.5
Sample A Female 96.8
Sample B Female 84.2
Sample C Male 127.9
Sample D Male 83.5
Ventral pallidum
nTPM: 87.9
Samples: 4

Max nTPM: 107.6
Min nTPM: 71.9
Sample A Female 82.2
Sample B Female 89.9
Sample C Male 107.6
Sample D Male 71.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

212.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 153.9
Samples: 4

Max nTPM: 155.5
Min nTPM: 152.9
Sample A Male 154.1
Sample B Male 153.2
Sample C Female 152.9
Sample D Female 155.5
Septum
nTPM: 212.6
Samples: 4

Max nTPM: 226.3
Min nTPM: 198.3
Sample A Male 208.6
Sample B Male 226.3
Sample C Female 217.0
Sample D Female 198.3
Ventral forebrain
nTPM: 179.7
Samples: 4

Max nTPM: 190.3
Min nTPM: 166.2
Sample A Male 166.2
Sample B Male 190.3
Sample C Female 187.0
Sample D Female 175.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.8
69169421 Antisense, RP_050321_03_E07, Mouse strain C57BL/6J (56 days, male) 5.8
Pallidum
Expression energy: 6.7
69169421 Antisense, RP_050321_03_E07, Mouse strain C57BL/6J (56 days, male) 6.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org