HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:92.8 nTPM
HPA Brain:68.8 nTPM
GTEx:92.8 nTPM
FANTOM5:217.7 Scaled Tags Per Million
Pig:54.9 nTPM
Mouse:125.7 nTPM
Allen mouse:9.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027183Antibody HPA028105
Glial cells LowNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 68.8
Sample id Sample description nTPM
Hippocampus
nTPM: 63.2
2529 Female, age 94, left hemisphere 85.4
2621 Female, age 67, right hemisphere 64.8
1898 Male, age 80, left hemisphere 60.2
1855 Male, age 76, left hemisphere 58.6
2148 Female, age 91, left hemisphere 57.0
1911 Female, age 85, right hemisphere 53.2
Dentate gyrus
nTPM: 62.7
2530 Female, age 94, left hemisphere 73.1
2531 Female, age 67, both hemispheres 70.3
2010 Male, age 76, both hemispheres 67.7
2246 Female, age 85, both hemispheres 63.9
1927 Female, age 91, both hemispheres 51.1
2528 Male, age 74, both hemispheres 50.1
Entorhinal gyrus
nTPM: 61.5
2764 Male, age 80, right hemisphere 68.7
1938 Female, age 85, left hemisphere 65.7
2686 Male, age 75, right hemisphere 64.2
1787 Male, age 76, left hemisphere 59.4
2117 Female, age 91, right hemisphere 58.9
2613 Female, age 94, left hemisphere 52.1
Hippocampus, CA1
nTPM: 64.4
2045 Male, age 76, both hemispheres 91.2
2527 Male, age 74, both hemispheres 59.8
2749 Male, age 80, left hemisphere 58.4
2082 Female, age 91, right hemisphere 56.3
1873 Female, age 85, both hemispheres 56.1
Hippocampus, CA2
nTPM: 60.5
1892 Male, age 76, both hemispheres 70.8
1940 Female, age 85, left hemisphere 69.3
2437 Female, age 94, left hemisphere 63.2
2113 Female, age 91, right hemisphere 55.7
2249 Male, age 74, both hemispheres 54.2
1963 Male, age 80, left hemisphere 49.9
Hippocampus, CA3
nTPM: 63.9
1867 Male, age 76, both hemispheres 72.8
2620 Female, age 94, left hemisphere 67.8
2861 Female, age 67, both hemispheres 65.5
2137 Male, age 80, left hemisphere 59.4
2436 Male, age 74, both hemispheres 59.1
1891 Female, age 85, both hemispheres 58.8
Parahippocampal cortex
nTPM: 65.1
2245 Female, age 91, both hemispheres 79.0
1850 Male, age 80, both hemispheres 76.4
2532 Female, age 72, left hemisphere 76.0
2018 Male, age 76, both hemispheres 68.2
2622 Female, age 67, right hemisphere 63.1
1933 Female, age 85, both hemispheres 62.7
2692 Male, age 74, both hemispheres 60.9
1990 Female, age 91, right hemisphere 59.9
2250 Female, age 67, right hemisphere 54.4
2693 Female, age 94, both hemispheres 50.5
Perirhinal gyrus
nTPM: 68.8
1794 Male, age 80, right hemisphere 74.4
1841 Female, age 85, right hemisphere 74.1
2848 Male, age 76, right hemisphere 73.2
1847 Female, age 91, left hemisphere 64.7
2521 Female, age 94, right hemisphere 57.4
Subiculum
nTPM: 63.3
2438 Female, age 94, left hemisphere 73.7
2042 Male, age 76, both hemispheres 69.8
1901 Male, age 80, both hemispheres 67.2
1977 Female, age 85, both hemispheres 64.5
2619 Male, age 74, both hemispheres 55.8
2729 Female, age 91, right hemisphere 48.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 92.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 92.8
Samples: 197

Max nTPM: 197.5
Min nTPM: 51.0
Std nTPM: 23.5
Median nTPM: 88.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 197.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 181.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 180.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 175.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 168.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 152.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 150.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 145.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 143.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 142.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 133.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 217.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 217.7
FF:10169-103B7 60 years, female 223.2
FF:10153-102I9 76 years, female 212.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 54.9
Pig sample Sample description nTPM
Subiculum
nTPM: 47.9
Samples: 4

Max nTPM: 64.8
Min nTPM: 37.8
Sample A Female 64.8
Sample B Female 44.1
Sample C Male 44.8
Sample D Male 37.8
Dorsal hippocampus
nTPM: 54.9
Samples: 4

Max nTPM: 65.9
Min nTPM: 43.8
Sample A Female 65.9
Sample B Female 48.2
Sample C Male 61.6
Sample D Male 43.8
Entorhinal cortex
nTPM: 50.6
Samples: 4

Max nTPM: 58.5
Min nTPM: 47.4
Sample A Female 48.1
Sample B Female 58.5
Sample C Male 48.3
Sample D Male 47.4
Ventral hippocampus
nTPM: 49.8
Samples: 4

Max nTPM: 57.9
Min nTPM: 38.7
Sample A Female 46.1
Sample B Female 38.7
Sample C Male 57.9
Sample D Male 56.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 125.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 125.7
Samples: 4

Max nTPM: 128.2
Min nTPM: 122.3
Sample A Male 127.2
Sample B Male 125.1
Sample C Female 122.3
Sample D Female 128.2
Hippocampal formation
nTPM: 125.5
Samples: 4

Max nTPM: 135.5
Min nTPM: 114.7
Sample A Male 114.7
Sample B Male 124.2
Sample C Female 135.5
Sample D Female 127.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 9.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.7
68302329 Antisense, RP_041130_02_F06, Mouse strain C57BL/6J (56 days, male) 10.6
2442 Antisense, RP_Baylor_253947, Mouse strain C57BL/6J (56 days, male) 8.9

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