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RAB11FIP3
HPA
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  • RAB11FIP3
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

RAB11FIP3
Synonyms eferin, KIAA0665, Rab11-FIP3
Gene descriptioni

Full gene name according to HGNC.

RAB11 family interacting protein 3
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 16
Cytoband p13.3
Chromosome location (bp) 425649 - 523011
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000090565 (version 109)
Entrez gene 9727
HGNC HGNC:17224
UniProt O75154 (UniProt - Evidence at protein level)
neXtProt NX_O75154
GeneCards RAB11FIP3
Antibodypedia RAB11FIP3 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Downstream effector molecule for Rab11 GTPase which is involved in endocytic trafficking, cytokinesis and intracellular ciliogenesis by participating in membrane delivery 1, 2, 3, 4, 5, 6, 7, 8, 9, 10. Recruited by Rab11 to endosomes where it links Rab11 to dynein motor complex 11. The functional Rab11-RAB11FIP3-dynein complex regulates the movement of peripheral sorting endosomes (SE) along microtubule tracks toward the microtubule organizing center/centrosome, generating the endocytic recycling compartment (ERC) during interphase of cell cycle 12, 13. Facilitates the interaction between dynein and dynactin and activates dynein processivity 14. Binding with ASAP1 is needed to regulate the pericentrosomal localization of recycling endosomes (By similarity). The Rab11-RAB11FIP3 complex is also implicated in the transport during telophase of vesicles derived from recycling endosomes to the cleavage furrow via centrosome-anchored microtubules, where the vesicles function to deliver membrane during late cytokinesis and abscission 15, 16. The recruitment of Rab11-RAB11FIP3-containing endosomes to the cleavage furrow and tethering to the midbody is co-mediated by RAB11FIP3 interaction with ARF6-exocyst and RACGAP1-MKLP1 tethering complexes 17, 18. Also involved in the Rab11-Rabin8-Rab8 ciliogenesis cascade by facilitating the orderly assembly of a ciliary targeting complex containing Rab11, ASAP1, Rabin8/RAB3IP, RAB11FIP3 and ARF4, which directs preciliary vesicle trafficking to mother centriole and ciliogenesis initiation 19, 20. Also promotes the activity of Rab11 and ASAP1 in the ARF4-dependent Golgi-to-cilia transport of the sensory receptor rhodopsin 21. Competes with WDR44 for binding to Rab11, which controls intracellular ciliogenesis pathway 22. May play a role in breast cancer cell motility by regulating actin cytoskeleton 23.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Cell cycle, Cell division, Transport
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Calcium, Metal-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

Proteins of the large Rab GTPase family (see RAB1A; MIM 179508) have regulatory roles in the formation, targeting, and fusion of intracellular transport vesicles. RAB11FIP3 is one of many proteins that interact with and regulate Rab GTPases (Hales et al., 2001).[supplied by OMIM, Mar 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
RAB11FIP3-201
ENSP00000262305
ENST00000262305
O75154
[Direct mapping] Rab11 family-interacting protein 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005509 [calcium ion binding]
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005768 [endosome]
GO:0005813 [centrosome]
GO:0005815 [microtubule organizing center]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0007049 [cell cycle]
GO:0016020 [membrane]
GO:0016192 [vesicle-mediated transport]
GO:0030139 [endocytic vesicle]
GO:0030496 [midbody]
GO:0031267 [small GTPase binding]
GO:0032154 [cleavage furrow]
GO:0032456 [endocytic recycling]
GO:0032465 [regulation of cytokinesis]
GO:0034451 [centriolar satellite]
GO:0042803 [protein homodimerization activity]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045171 [intercellular bridge]
GO:0046872 [metal ion binding]
GO:0051301 [cell division]
GO:0051959 [dynein light intermediate chain binding]
GO:0055037 [recycling endosome]
GO:0055038 [recycling endosome membrane]
GO:0061512 [protein localization to cilium]
GO:0070164 [negative regulation of adiponectin secretion]
GO:0098944 [postsynaptic recycling endosome membrane]
Show all
756 aa
82.4 kDa
No 0
RAB11FIP3-202
ENSP00000412502
ENST00000412256
H0Y7F9
[Direct mapping] Rab11 family-interacting protein 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0016192 [vesicle-mediated transport]
GO:0031267 [small GTPase binding]
GO:0032456 [endocytic recycling]
GO:0032465 [regulation of cytokinesis]
Show all
136 aa
14.6 kDa
No 0
RAB11FIP3-203
ENSP00000399644
ENST00000434585
X6RFI8
[Direct mapping] Rab11 family-interacting protein 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005509 [calcium ion binding]
GO:0005654 [nucleoplasm]
GO:0005739 [mitochondrion]
GO:0010008 [endosome membrane]
GO:0016020 [membrane]
GO:0016192 [vesicle-mediated transport]
GO:0030496 [midbody]
GO:0031267 [small GTPase binding]
GO:0032154 [cleavage furrow]
GO:0032456 [endocytic recycling]
GO:0032465 [regulation of cytokinesis]
GO:0034451 [centriolar satellite]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045171 [intercellular bridge]
GO:0055038 [recycling endosome membrane]
Show all
801 aa
87.6 kDa
No 0
RAB11FIP3-204
ENSP00000404331
ENST00000449879
A0A0A0MSV1
[Direct mapping] Rab11 family-interacting protein 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0016192 [vesicle-mediated transport]
GO:0031267 [small GTPase binding]
GO:0032456 [endocytic recycling]
GO:0032465 [regulation of cytokinesis]
Show all
143 aa
15.1 kDa
No 0
RAB11FIP3-205
ENSP00000415919
ENST00000450428
O75154
[Direct mapping] Rab11 family-interacting protein 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005509 [calcium ion binding]
GO:0005515 [protein binding]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005768 [endosome]
GO:0005813 [centrosome]
GO:0005815 [microtubule organizing center]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0007049 [cell cycle]
GO:0016020 [membrane]
GO:0016192 [vesicle-mediated transport]
GO:0030139 [endocytic vesicle]
GO:0030496 [midbody]
GO:0031267 [small GTPase binding]
GO:0032154 [cleavage furrow]
GO:0032456 [endocytic recycling]
GO:0032465 [regulation of cytokinesis]
GO:0034451 [centriolar satellite]
GO:0042803 [protein homodimerization activity]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045171 [intercellular bridge]
GO:0046872 [metal ion binding]
GO:0051301 [cell division]
GO:0051959 [dynein light intermediate chain binding]
GO:0055037 [recycling endosome]
GO:0055038 [recycling endosome membrane]
GO:0070164 [negative regulation of adiponectin secretion]
Show all
460 aa
52.5 kDa
No 0
RAB11FIP3-206
ENSP00000399614
ENST00000452814
F6X994
[Direct mapping] Rab11 family-interacting protein 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0016192 [vesicle-mediated transport]
GO:0031267 [small GTPase binding]
GO:0032456 [endocytic recycling]
GO:0032465 [regulation of cytokinesis]
Show all
182 aa
19.6 kDa
No 0

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