PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:142.2 nTPM
FANTOM5:210.6 Scaled Tags Per Million
Pig:110.3 nTPM
Mouse:57.0 nTPM
Allen mouse:1.9 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 142.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 93.7
2188 Female, age 91, both hemispheres 103.0
1984 Male, age 76, both hemispheres 101.3
2301 Female, age 85, both hemispheres 90.7
2090 Male, age 80, both hemispheres 79.8
Area postrema
nTPM: 108.8
2054 Male, age 76, both hemispheres 129.2
2799 Male, age 61, both hemispheres 119.2
2306 Male, age 80, both hemispheres 78.0
Dorsal cochlear nucleus
nTPM: 93.0
2058 Male, age 76, both hemispheres 107.2
2370 Male, age 61, both hemispheres 100.2
2187 Female, age 91, both hemispheres 97.3
2802 Male, age 74, right hemisphere 86.8
2378 Male, age 80, both hemispheres 73.7
Dorsal medullary reticular nucleus
nTPM: 108.7
2040 Female, age 85, both hemispheres 133.0
2373 Male, age 61, both hemispheres 101.1
2088 Male, age 76, both hemispheres 92.0
Dorsal motor vagal complex
nTPM: 106.2
2813 Female, age 72, unknown 130.4
2133 Female, age 91, both hemispheres 129.7
2000 Male, age 74, unknown 123.5
2844 Male, age 55, unknown 121.1
2185 Male, age 76, both hemispheres 100.9
2643 Male, age 74, both hemispheres 93.1
2797 Male, age 61, both hemispheres 80.7
2807 Female, age 85, both hemispheres 70.7
Dorsal tegmental nucleus
nTPM: 110.4
2083 Male, age 80, both hemispheres 115.9
2358 Male, age 61, both hemispheres 114.3
2326 Male, age 74, both hemispheres 107.7
1936 Male, age 76, left hemisphere 103.6
Dorsolateral tegmental area
nTPM: 112.0
2360 Male, age 74, both hemispheres 123.3
2654 Male, age 80, both hemispheres 109.9
2141 Male, age 76, both hemispheres 109.4
2751 Female, age 85, both hemispheres 108.8
2337 Male, age 61, both hemispheres 108.6
Gigantocellular reticular nuclei, medullary
nTPM: 113.0
2462 Male, age 74, both hemispheres 147.1
2314 Male, age 61, both hemispheres 120.8
1876 Female, age 85, both hemispheres 117.0
2022 Male, age 76, right hemisphere 102.4
2387 Female, age 91, both hemispheres 96.6
2310 Male, age 80, both hemispheres 93.9
Gigantocellular reticular nuclei, pars
nTPM: 117.5
2168 Male, age 76, both hemispheres 152.6
2084 Female, age 85, both hemispheres 127.0
2336 Male, age 61, both hemispheres 116.3
2706 Male, age 80, both hemispheres 96.7
2330 Male, age 80, both hemispheres 94.8
Inferior olive
nTPM: 135.2
2085 Female, age 85, both hemispheres 197.8
2563 Male, age 74, both hemispheres 138.0
2178 Male, age 61, both hemispheres 118.4
2379 Male, age 80, both hemispheres 116.3
2628 Female, age 91, both hemispheres 105.5
Kolliker-Fuse nucleus
nTPM: 121.0
2315 Male, age 76, right hemisphere 151.0
2163 Male, age 80, both hemispheres 115.7
2793 Female, age 91, left hemisphere 96.4
Lateral lemniscal nuclei
nTPM: 133.1
2169 Male, age 76, both hemispheres 162.0
2036 Male, age 80, both hemispheres 149.0
2746 Female, age 85, left hemisphere 128.9
2453 Male, age 74, right hemisphere 123.7
2320 Female, age 91, left hemisphere 101.7
Lateral medullary reticular nucleus
nTPM: 134.2
2374 Male, age 61, both hemispheres 151.4
2044 Male, age 76, both hemispheres 148.2
2804 Female, age 91, both hemispheres 137.5
2190 Female, age 85, both hemispheres 137.0
2305 Male, age 74, both hemispheres 134.6
2852 Male, age 80, both hemispheres 96.2
Lateral parabrachial nucleus
nTPM: 112.7
2139 Female, age 85, right hemisphere 157.8
2013 Male, age 80, both hemispheres 108.7
2792 Male, age 76, both hemispheres 102.1
2790 Male, age 61, both hemispheres 82.3
Lateral vestibular nucleus
nTPM: 100.8
2184 Male, age 76, both hemispheres 107.3
2311 Male, age 80, both hemispheres 94.3
Locus coeruleus
nTPM: 102.3
2788 Male, age 74, unknown 121.8
2014 Male, age 55, unknown 111.7
2123 Female, age 91, both hemispheres 111.3
2162 Male, age 80, both hemispheres 95.8
2317 Female, age 72, unknown 94.1
1980 Male, age 76, both hemispheres 92.5
2720 Male, age 74, both hemispheres 88.7
Medial olivary nucleus
nTPM: 118.0
1962 Male, age 76, both hemispheres 129.1
2138 Female, age 91, both hemispheres 121.9
1943 Male, age 61, both hemispheres 115.0
2851 Male, age 80, both hemispheres 106.1
Medial parabrachial nucleus
nTPM: 100.0
2156 Male, age 61, both hemispheres 106.6
2854 Male, age 80, both hemispheres 106.2
2170 Female, age 91, both hemispheres 100.1
2463 Female, age 85, right hemisphere 95.2
2786 Male, age 76, both hemispheres 92.0
Medial periolivary nuclei
nTPM: 130.6
2171 Female, age 85, both hemispheres 170.6
2063 Male, age 76, both hemispheres 160.4
2791 Male, age 74, right hemisphere 137.2
2458 Female, age 91, both hemispheres 93.7
2081 Male, age 80, both hemispheres 91.2
Medial vestibular nucleus
nTPM: 116.3
2134 Male, age 76, both hemispheres 126.9
2743 Female, age 85, both hemispheres 122.4
2093 Male, age 80, both hemispheres 114.5
2801 Male, age 74, both hemispheres 112.9
2624 Male, age 61, both hemispheres 111.8
2803 Female, age 91, both hemispheres 109.5
Motor facial nucleus
nTPM: 124.1
2062 Male, age 76, both hemispheres 163.8
2365 Male, age 74, right hemisphere 135.3
2795 Female, age 91, both hemispheres 124.3
2697 Female, age 85, both hemispheres 114.5
2327 Male, age 80, both hemispheres 112.4
2126 Male, age 61, both hemispheres 94.3
Motor hypoglossal nucleus
nTPM: 115.9
2461 Male, age 61, both hemispheres 138.3
2277 Male, age 76, both hemispheres 132.8
2125 Female, age 91, both hemispheres 116.4
2132 Female, age 85, both hemispheres 102.1
2182 Male, age 80, both hemispheres 89.9
Motor trigeminal nucleus
nTPM: 100.7
2079 Male, age 80, both hemispheres 114.9
2335 Male, age 61, both hemispheres 112.3
2309 Male, age 76, both hemispheres 102.6
2560 Male, age 74, both hemispheres 92.4
2321 Female, age 91, both hemispheres 81.4
Nuclei of the trapezoid body
nTPM: 141.0
2735 Female, age 85, both hemispheres 175.2
2159 Male, age 61, both hemispheres 152.4
1983 Male, age 76, both hemispheres 148.6
2166 Male, age 80, both hemispheres 116.2
2368 Female, age 91, both hemispheres 112.7
Nucleus ambiguus
nTPM: 122.6
2071 Male, age 76, both hemispheres 147.8
2096 Female, age 85, both hemispheres 97.3
Nucleus cuneatus
nTPM: 89.2
2564 Male, age 74, both hemispheres 124.9
2131 Male, age 76, both hemispheres 104.1
2808 Female, age 85, both hemispheres 90.0
2376 Male, age 61, both hemispheres 89.1
2100 Male, age 76, both hemispheres 89.0
2380 Male, age 80, both hemispheres 88.2
2562 Male, age 61, both hemispheres 86.5
2381 Male, age 80, both hemispheres 66.1
2805 Female, age 91, both hemispheres 65.2
Nucleus gracilis
nTPM: 82.5
2627 Male, age 74, both hemispheres 146.1
2299 Female, age 85, both hemispheres 52.9
2382 Male, age 80, both hemispheres 48.4
Nucleus raphe magnus
nTPM: 140.2
2172 Female, age 85, both hemispheres 172.2
2455 Male, age 74, both hemispheres 164.5
2160 Male, age 61, both hemispheres 150.0
2051 Male, age 76, both hemispheres 130.2
2328 Male, age 80, both hemispheres 119.2
2459 Female, age 91, both hemispheres 105.4
Nucleus raphe obscurus
nTPM: 124.4
2800 Male, age 61, midline 136.1
2845 Female, age 85, midline 127.2
2142 Male, age 76, midline 109.9
Nucleus raphe pallidus
nTPM: 129.7
1924 Male, age 61, midline 152.8
2145 Male, age 76, midline 118.2
2183 Male, age 80, midline 118.1
Nucleus tractus solitarii
nTPM: 108.6
2144 Female, age 91, right hemisphere 160.1
2656 Male, age 76, both hemispheres 115.2
2191 Female, age 85, both hemispheres 88.5
2307 Male, age 80, both hemispheres 70.5
Paramedian reticular nucleus
nTPM: 122.2
2050 Female, age 85, both hemispheres 147.1
2052 Male, age 76, both hemispheres 118.4
2057 Male, age 80, both hemispheres 114.8
2313 Male, age 61, both hemispheres 108.4
Parvicellular reticular nuclei
nTPM: 116.0
2119 Male, age 80, both hemispheres 126.9
2095 Male, age 76, both hemispheres 117.6
2558 Male, age 74, both hemispheres 103.6
Parvicellular reticular nuclei, medullary
nTPM: 106.4
2189 Female, age 91, both hemispheres 112.8
2091 Female, age 85, both hemispheres 106.5
2181 Male, age 80, left hemisphere 99.9
Pedunculopontine tegmental nucleus
nTPM: 116.4
2338 Male, age 61, both hemispheres 128.8
1921 Female, age 85, both hemispheres 115.2
2334 Male, age 80, both hemispheres 105.1
Peritrigeminal nucleus
nTPM: 139.8
2136 Male, age 76, both hemispheres 148.8
2067 Female, age 85, both hemispheres 137.9
2179 Male, age 61, both hemispheres 132.9
Pontine nuclei
nTPM: 132.4
1863 Male, age 55, unknown 193.8
2787 Female, age 85, both hemispheres 157.8
2727 Male, age 61, right hemisphere 136.9
1968 Male, age 76, left hemisphere 135.1
2109 Female, age 72, unknown 132.3
2454 Male, age 74, left hemisphere 107.4
2115 Male, age 80, left hemisphere 99.3
2319 Female, age 91, both hemispheres 96.5
Pontine raphe nucleus
nTPM: 134.6
2122 Female, age 85, midline 157.5
2853 Male, age 76, midline 111.8
Posteroventral cochlear nucleus
nTPM: 97.4
2752 Female, age 85, both hemispheres 123.7
2070 Male, age 76, both hemispheres 121.8
2371 Male, age 61, both hemispheres 90.7
2341 Male, age 80, both hemispheres 80.8
2135 Female, age 91, both hemispheres 70.0
Prepositus hypoglossal nucleus
nTPM: 99.2
2086 Male, age 80, both hemispheres 104.7
2855 Female, age 85, right hemisphere 93.7
Principal sensory trigeminal nucleus
nTPM: 117.3
2158 Male, age 61, both hemispheres 145.9
2008 Male, age 80, left hemisphere 128.3
2324 Male, age 76, both hemispheres 105.2
2367 Female, age 91, left hemisphere 89.6
Reticular pontine nucleus, caudal
nTPM: 106.5
2092 Male, age 76, both hemispheres 136.7
2332 Male, age 80, right hemisphere 119.6
2457 Female, age 91, both hemispheres 93.5
2559 Male, age 74, both hemispheres 76.2
Reticular pontine nucleus, oral
nTPM: 119.1
2012 Female, age 85, both hemispheres 140.2
1939 Male, age 80, both hemispheres 123.8
2361 Male, age 74, both hemispheres 123.5
2167 Male, age 76, both hemispheres 107.3
2366 Female, age 91, both hemispheres 100.9
Reticulotegmental nucleus
nTPM: 108.7
2325 Male, age 76, both hemispheres 119.0
2333 Male, age 80, both hemispheres 110.7
2452 Male, age 74, both hemispheres 108.4
2322 Female, age 91, both hemispheres 96.8
Spinal trigeminal nucleus, caudal
nTPM: 97.2
2390 Female, age 91, both hemispheres 110.0
2447 Male, age 76, both hemispheres 99.5
2642 Male, age 74, both hemispheres 96.8
2308 Male, age 80, both hemispheres 89.9
2312 Male, age 61, both hemispheres 89.7
Spinal trigeminal nucleus, interpolar
nTPM: 132.8
2066 Male, age 76, right hemisphere 182.2
2625 Male, age 61, both hemispheres 150.8
2389 Female, age 91, both hemispheres 119.6
2033 Male, age 80, both hemispheres 107.7
2386 Female, age 85, both hemispheres 104.0
Spinal trigeminal nucleus, oral
nTPM: 103.7
1978 Male, age 76, both hemispheres 113.0
2737 Female, age 85, both hemispheres 106.5
2164 Male, age 80, both hemispheres 91.7
Spinal vestibular nucleus
nTPM: 104.9
2186 Female, age 91, both hemispheres 114.5
2780 Male, age 80, both hemispheres 107.1
2748 Male, age 76, both hemispheres 106.8
2796 Male, age 61, both hemispheres 104.1
2806 Female, age 85, both hemispheres 102.9
2384 Male, age 74, both hemispheres 93.9
Subcoeruleus area
nTPM: 113.5
1958 Male, age 80, both hemispheres 126.2
2089 Male, age 76, left hemisphere 121.3
2323 Female, age 91, left hemisphere 114.3
2451 Male, age 74, both hemispheres 106.9
2369 Female, age 85, left hemisphere 98.9
Superior olive
nTPM: 130.4
1875 Female, age 85, both hemispheres 170.8
2364 Male, age 74, right hemisphere 149.2
2020 Male, age 76, both hemispheres 124.6
2329 Male, age 80, right hemisphere 107.1
2561 Female, age 91, both hemispheres 100.1
Superior vestibular nucleus
nTPM: 128.7
2383 Male, age 74, both hemispheres 163.4
2061 Male, age 76, both hemispheres 115.8
2015 Male, age 80, both hemispheres 106.9
Ventral medullary reticular nucleus
nTPM: 116.7
2372 Male, age 61, both hemispheres 129.5
2060 Male, age 76, both hemispheres 104.0
Ventral periolivary nuclei
nTPM: 142.2
2130 Female, age 85, both hemispheres 180.8
2165 Male, age 80, both hemispheres 147.7
2023 Male, age 76, both hemispheres 131.0
2794 Female, age 91, left hemisphere 109.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 131.6
1986 Male, age 76, both hemispheres 157.1
2741 Female, age 85, both hemispheres 140.0
2180 Male, age 61, both hemispheres 138.0
2302 Female, age 91, both hemispheres 119.0
2118 Male, age 80, both hemispheres 104.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 116.2
2449 Male, age 74, both hemispheres 137.3
1959 Male, age 76, both hemispheres 133.5
2840 Female, age 85, both hemispheres 120.2
2161 Male, age 80, both hemispheres 111.9
2359 Male, age 61, both hemispheres 100.3
2456 Female, age 91, both hemispheres 93.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 210.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 118.5
FF:10182-103D2 60 years, female 121.8
FF:10165-103B3 76 years, female 115.3
Medulla oblongata
Scaled Tags Per Million: 112.2
FF:10038-101F2 18-64 years, mixed 153.5
FF:10155-103A2 76 years, female 102.0
FF:10174-103C3 60 years, female 81.1
Pons
Scaled Tags Per Million: 210.6
FF:10033-101E6 18-54 years, mixed 210.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 110.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 99.3
Samples: 4

Max nTPM: 104.2
Min nTPM: 94.0
Sample A Female 104.2
Sample B Female 98.2
Sample C Male 94.0
Sample D Male 100.7
Pons
nTPM: 110.3
Samples: 4

Max nTPM: 125.5
Min nTPM: 103.0
Sample A Female 125.5
Sample B Female 103.0
Sample C Male 104.9
Sample D Male 107.9

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 57.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 57.0
Samples: 4

Max nTPM: 59.3
Min nTPM: 53.9
Sample A Male 53.9
Sample B Male 59.3
Sample C Female 56.8
Sample D Female 57.9

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.9
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.9
172 Antisense, RP_Baylor_103411, Mouse strain C57BL/6J (56 days, male) 1.9
173 Antisense, RP_Baylor_103411, Mouse strain C57BL/6J (56 days, male) 1.7
Pons
Expression energy: 1.5
172 Antisense, RP_Baylor_103411, Mouse strain C57BL/6J (56 days, male) 1.5
173 Antisense, RP_Baylor_103411, Mouse strain C57BL/6J (56 days, male) 0.8

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