HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:13.0 nTPM
HPA Brain:31.2 nTPM
GTEx:13.0 nTPM
FANTOM5:52.2 Scaled Tags Per Million
Pig:32.7 nTPM
Mouse:9.2 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012696Antibody HPA027582Antibody CAB009009
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedMediumLow






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 31.2
Sample id Sample description nTPM
Hippocampus
nTPM: 31.2
2529 Female, age 94, left hemisphere 36.7
2148 Female, age 91, left hemisphere 33.7
1911 Female, age 85, right hemisphere 31.5
1855 Male, age 76, left hemisphere 30.7
1898 Male, age 80, left hemisphere 28.0
2621 Female, age 67, right hemisphere 26.5
Dentate gyrus
nTPM: 28.2
2530 Female, age 94, left hemisphere 36.0
2528 Male, age 74, both hemispheres 30.5
2246 Female, age 85, both hemispheres 29.5
2010 Male, age 76, both hemispheres 25.5
2531 Female, age 67, both hemispheres 24.2
1927 Female, age 91, both hemispheres 23.5
Entorhinal gyrus
nTPM: 24.7
2117 Female, age 91, right hemisphere 39.5
1787 Male, age 76, left hemisphere 26.5
2686 Male, age 75, right hemisphere 25.6
1938 Female, age 85, left hemisphere 22.9
2764 Male, age 80, right hemisphere 19.3
2613 Female, age 94, left hemisphere 14.6
Hippocampus, CA1
nTPM: 25.4
2527 Male, age 74, both hemispheres 34.1
1873 Female, age 85, both hemispheres 29.0
2082 Female, age 91, right hemisphere 23.2
2045 Male, age 76, both hemispheres 20.6
2749 Male, age 80, left hemisphere 20.3
Hippocampus, CA2
nTPM: 27.9
2249 Male, age 74, both hemispheres 31.3
1963 Male, age 80, left hemisphere 29.7
2113 Female, age 91, right hemisphere 29.6
1940 Female, age 85, left hemisphere 28.8
2437 Female, age 94, left hemisphere 28.6
1892 Male, age 76, both hemispheres 19.4
Hippocampus, CA3
nTPM: 29.4
2436 Male, age 74, both hemispheres 37.1
2861 Female, age 67, both hemispheres 35.0
1891 Female, age 85, both hemispheres 30.5
1867 Male, age 76, both hemispheres 26.5
2620 Female, age 94, left hemisphere 23.8
2137 Male, age 80, left hemisphere 23.3
Parahippocampal cortex
nTPM: 25.2
2018 Male, age 76, both hemispheres 30.5
2692 Male, age 74, both hemispheres 27.9
2693 Female, age 94, both hemispheres 27.5
2245 Female, age 91, both hemispheres 27.4
2250 Female, age 67, right hemisphere 24.7
2622 Female, age 67, right hemisphere 24.4
1933 Female, age 85, both hemispheres 24.1
1990 Female, age 91, right hemisphere 23.4
1850 Male, age 80, both hemispheres 22.8
2532 Female, age 72, left hemisphere 19.2
Perirhinal gyrus
nTPM: 23.6
2848 Male, age 76, right hemisphere 29.4
1841 Female, age 85, right hemisphere 24.9
1794 Male, age 80, right hemisphere 21.9
2521 Female, age 94, right hemisphere 21.2
1847 Female, age 91, left hemisphere 20.5
Subiculum
nTPM: 30.0
2729 Female, age 91, right hemisphere 36.3
2042 Male, age 76, both hemispheres 34.8
2619 Male, age 74, both hemispheres 31.4
2438 Female, age 94, left hemisphere 30.5
1977 Female, age 85, both hemispheres 23.7
1901 Male, age 80, both hemispheres 23.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 13.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.0
Samples: 197

Max nTPM: 40.4
Min nTPM: 4.9
Std nTPM: 5.4
Median nTPM: 12.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 40.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 38.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 32.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 31.4
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 30.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 27.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 26.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 25.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 25.4
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 22.6
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 20.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 52.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.2
FF:10169-103B7 60 years, female 61.2
FF:10153-102I9 76 years, female 43.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 32.7
Pig sample Sample description nTPM
Subiculum
nTPM: 29.5
Samples: 4

Max nTPM: 35.0
Min nTPM: 25.1
Sample A Female 35.0
Sample B Female 27.9
Sample C Male 29.8
Sample D Male 25.1
Dorsal hippocampus
nTPM: 31.9
Samples: 4

Max nTPM: 36.1
Min nTPM: 29.2
Sample A Female 32.2
Sample B Female 36.1
Sample C Male 29.2
Sample D Male 30.1
Entorhinal cortex
nTPM: 25.5
Samples: 4

Max nTPM: 29.7
Min nTPM: 21.8
Sample A Female 29.7
Sample B Female 24.5
Sample C Male 26.0
Sample D Male 21.8
Ventral hippocampus
nTPM: 32.7
Samples: 4

Max nTPM: 34.0
Min nTPM: 30.6
Sample A Female 34.0
Sample B Female 32.8
Sample C Male 33.5
Sample D Male 30.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 9.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.3
Samples: 4

Max nTPM: 10.1
Min nTPM: 8.8
Sample A Male 10.1
Sample B Male 8.8
Sample C Female 9.0
Sample D Female 9.1
Hippocampal formation
nTPM: 7.7
Samples: 4

Max nTPM: 8.6
Min nTPM: 5.9
Sample A Male 8.6
Sample B Male 8.3
Sample C Female 5.9
Sample D Female 8.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
68919830 Antisense, RP_050301_02_F04, Mouse strain C57BL/6J (56 days, male) 0.2

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