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PSME1
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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:71.4 nTPM
HPA Brain:18.9 nTPM
GTEx:71.4 nTPM
FANTOM5:167.2 Scaled Tags Per Million
Pig:60.4 nTPM
Mouse:62.6 nTPM
Allen mouse:3.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA006632
Glial cells Low
Neuronal cells Low

BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 17.7
2481 Female, age 94, left hemisphere 25.3
2846 Female, age 79, unknown 19.2
1781 Male, age 74, unknown 17.6
2288 Male, age 75, left hemisphere 16.8
1854 Male, age 80, left hemisphere 16.4
2290 Female, age 72, unknown 16.3
1857 Female, age 85, left hemisphere 15.6
2289 Male, age 61, right hemisphere 14.4
Globus pallidus, externus
nTPM: 17.7
1996 Male, age 80, right hemisphere 24.9
2772 Female, age 79, unknown 22.5
2395 Male, age 75, both hemispheres 18.0
2646 Male, age 61, right hemisphere 13.4
2567 Female, age 72, unknown 9.9
Globus pallidus, internus
nTPM: 18.9
2037 Male, age 80, right hemisphere 21.5
2483 Female, age 94, right hemisphere 20.6
2778 Female, age 91, both hemispheres 20.6
2111 Female, age 85, right hemisphere 19.0
1818 Male, age 74, unknown 18.9
2287 Male, age 75, right hemisphere 18.5
2566 Female, age 72, unknown 13.2
Nucleus accumbens
nTPM: 16.2
2391 Female, age 94, left hemisphere 19.2
2286 Male, age 75, left hemisphere 18.7
1806 Female, age 85, left hemisphere 17.9
2698 Female, age 72, unknown 17.3
2732 Male, age 80, right hemisphere 15.7
1783 Male, age 74, unknown 15.0
1856 Female, age 91, right hemisphere 14.7
2824 Male, age 61, right hemisphere 11.3
Nucleus basalis of Meynert
nTPM: 16.0
2484 Female, age 94, left hemisphere 17.9
2821 Male, age 75, both hemispheres 15.9
2569 Male, age 61, both hemispheres 15.7
2393 Male, age 80, right hemisphere 14.5
Nucleus of the diagonal band
nTPM: 13.2
1812 Female, age 91, both hemispheres 17.1
1979 Male, age 74, unknown 13.6
2029 Male, age 61, right hemisphere 12.3
2775 Male, age 80, right hemisphere 11.8
2195 Female, age 85, both hemispheres 11.3
Putamen
nTPM: 15.3
2482 Female, age 94, left hemisphere 22.6
2466 Female, age 79, unknown 16.6
1937 Female, age 91, right hemisphere 15.3
1829 Male, age 74, unknown 14.2
1838 Male, age 80, right hemisphere 14.2
2489 Female, age 72, unknown 13.4
2647 Male, age 75, left hemisphere 11.1
Septal nuclei
nTPM: 14.4
2394 Male, age 61, left hemisphere 16.8
2199 Male, age 80, right hemisphere 16.6
2031 Female, age 72, unknown 14.3
1960 Male, age 74, unknown 14.0
2009 Female, age 91, both hemispheres 13.5
2629 Female, age 94, right hemisphere 13.0
2059 Female, age 85, both hemispheres 12.6
Stria terminalis, bed nucleus
nTPM: 12.1
1974 Female, age 91, both hemispheres 13.5
2201 Male, age 74, unknown 13.1
2486 Female, age 94, both hemispheres 9.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 65.1
Samples: 246

Max nTPM: 172.8
Min nTPM: 29.8
Std nTPM: 18.4
Median nTPM: 63.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 172.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 145.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 135.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 114.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 112.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 111.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 111.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 106.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 106.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 101.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 97.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 96.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 95.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 95.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 95.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 93.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 93.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 92.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 92.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 91.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 90.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 90.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 89.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 88.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 87.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 87.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 86.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 85.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 85.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 85.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 83.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 82.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 82.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 82.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 81.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 79.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 78.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 78.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 78.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 78.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 78.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 77.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 77.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 77.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 77.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 77.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 77.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 75.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 75.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 75.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 75.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 75.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 75.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 74.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 74.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 73.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 73.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 73.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 73.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 73.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 72.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 72.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 72.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 72.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 72.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 72.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 71.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 71.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 71.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 71.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 71.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 71.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 70.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 70.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 70.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 70.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 70.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 70.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 69.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 69.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 69.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 69.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 69.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 69.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 69.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 69.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 68.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 68.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 68.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 68.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 68.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 68.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 68.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 67.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 67.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 67.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 67.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 67.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 67.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 67.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 67.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 66.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 66.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 66.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 66.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 66.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 65.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 65.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 65.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 65.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 65.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 64.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 64.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 64.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 64.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 64.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 63.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 63.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 63.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 63.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 63.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 63.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 63.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 63.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 62.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 62.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 61.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 61.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 61.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 61.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 61.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 61.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 61.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 60.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 60.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 60.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 59.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 59.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 59.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 59.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 59.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 58.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 58.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 58.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 58.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 58.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 58.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 57.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 57.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 57.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 57.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 57.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 56.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 56.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 56.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 56.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 56.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 56.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 56.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 55.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 55.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 55.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 55.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 55.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 55.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 54.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 54.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 54.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 54.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 54.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 54.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 54.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 54.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 54.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 53.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 53.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 53.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 53.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 52.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 52.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 52.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 52.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 52.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 52.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 52.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 52.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 52.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 52.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 52.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 52.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 52.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 51.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 51.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 51.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 51.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 51.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 51.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 51.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 50.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 50.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 50.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 50.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 50.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 49.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 49.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 49.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 49.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 48.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 48.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 48.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 48.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 48.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 47.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 47.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 47.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 47.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 47.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 47.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 47.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 47.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 47.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 47.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 47.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 46.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 46.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 45.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 44.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 44.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 44.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 43.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 43.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 43.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 43.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 41.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 41.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 41.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 41.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 41.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 40.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 40.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 39.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 39.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 36.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 32.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 32.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 29.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 63.4
Samples: 246

Max nTPM: 150.9
Min nTPM: 33.7
Std nTPM: 19.6
Median nTPM: 58.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 150.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 133.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 125.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 123.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 121.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 118.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 116.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 114.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 111.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 109.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 107.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 104.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 99.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 98.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 98.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 97.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 94.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 93.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 92.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 91.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 91.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 91.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 91.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 89.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 89.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 89.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 89.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 86.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 85.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 85.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 85.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 85.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 84.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 84.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 84.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 84.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 83.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 83.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 83.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 82.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 82.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 82.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 82.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 82.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 81.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 81.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 79.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 79.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 78.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 78.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 77.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 77.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 77.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 77.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 77.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 75.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 74.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 73.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 73.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 73.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 72.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 72.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 72.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 71.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 71.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 71.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 70.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 70.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 70.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 70.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 70.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 70.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 69.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 68.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 68.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 68.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 68.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 68.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 67.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 67.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 67.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 67.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 67.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 67.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 66.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 66.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 66.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 66.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 66.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 65.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 65.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 65.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 65.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 64.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 64.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 63.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 63.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 63.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 63.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 62.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 62.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 62.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 62.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 62.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 62.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 61.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 61.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 61.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 61.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 60.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 60.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 60.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 59.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 59.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 59.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 59.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 59.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 59.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 59.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 58.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 58.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 58.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 58.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 58.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 58.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 58.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 58.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 57.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 57.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 57.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 57.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 57.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 57.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 57.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 57.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 56.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 56.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 55.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 55.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 55.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 55.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 55.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 55.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 54.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 54.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 54.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 54.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 54.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 54.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 54.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 54.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 54.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 53.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 53.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 53.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 53.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 53.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 53.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 52.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 52.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 52.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 52.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 52.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 52.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 52.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 51.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 51.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 51.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 51.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 51.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 51.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 51.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 50.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 50.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 50.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 50.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 50.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 50.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 50.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 50.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 50.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 49.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 49.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 49.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 49.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 49.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 49.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 48.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 48.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 48.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 48.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 48.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 48.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 48.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 48.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 48.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 48.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 48.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 48.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 47.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 47.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 47.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 47.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 47.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 47.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 46.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 46.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 45.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 45.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 45.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 45.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 45.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 45.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 45.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 44.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 44.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 44.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 44.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 44.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 43.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 43.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 43.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 43.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 42.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 42.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 42.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 42.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 41.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 41.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 41.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 41.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 40.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 40.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 40.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 40.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 39.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 39.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 39.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 39.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 38.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 38.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 38.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 38.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 36.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 35.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 33.7
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Brain - Putamen (basal ganglia)
Average nTPM: 71.4
Samples: 205

Max nTPM: 142.8
Min nTPM: 35.3
Std nTPM: 19.9
Median nTPM: 66.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 142.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 133.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 129.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 123.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 121.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 120.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 119.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 118.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 115.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 113.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 110.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 110.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 109.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 106.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 106.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 106.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 105.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 105.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 104.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 102.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 101.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 100.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 100.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 100.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 98.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 96.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 95.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 95.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 94.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 94.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 91.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 90.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 89.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 89.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 89.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 88.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 88.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 87.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 87.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 86.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 86.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 85.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 85.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 83.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 83.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 83.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 83.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 82.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 82.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 81.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 81.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 81.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 81.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 79.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 79.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 79.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 79.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 78.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 76.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 76.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 76.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 76.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 76.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 75.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 75.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 75.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 75.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 74.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 74.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 74.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 74.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 74.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 74.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 73.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 73.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 73.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 73.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 73.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 73.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 72.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 72.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 71.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 71.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 71.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 71.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 70.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 70.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 70.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 69.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 69.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 68.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 68.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 68.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 68.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 68.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 68.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 68.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 67.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 67.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 66.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 66.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 66.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 66.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 66.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 66.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 66.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 66.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 65.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 65.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 65.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 65.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 65.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 65.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 65.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 65.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 65.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 64.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 64.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 64.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 64.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 64.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 64.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 63.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 63.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 63.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 63.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 63.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 63.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 63.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 62.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 62.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 62.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 61.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 61.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 61.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 60.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 60.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 59.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 59.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 59.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 59.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 59.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 58.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 58.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 58.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 58.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 58.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 58.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 58.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 57.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 57.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 57.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 57.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 56.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 56.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 56.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 56.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 56.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 56.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 56.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 56.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 55.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 55.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 54.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 54.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 54.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 54.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 54.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 53.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 53.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 53.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 53.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 53.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 53.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 53.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 53.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 53.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 52.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 52.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 52.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 51.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 51.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 51.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 50.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 50.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 50.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 49.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 49.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 48.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 48.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 47.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 47.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 47.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 47.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 46.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 46.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 45.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 45.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 44.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 43.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 42.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 42.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 42.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 41.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 35.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

167.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 99.1
FF:10164-103B2 76 years, female 99.1
Nucleus accumbens
Scaled Tags Per Million: 58.0
FF:10037-101F1 23-56 years, mixed 58.0
Putamen
Scaled Tags Per Million: 69.6
FF:10176-103C5 60 years, female 69.6
Globus pallidus
Scaled Tags Per Million: 167.2
FF:10175-103C4 60 years, female 190.6
FF:10161-103A8 76 years, female 143.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.4
Pig sample Sample description nTPM
Caudate
nTPM: 44.6
Samples: 4

Max nTPM: 49.6
Min nTPM: 40.9
Sample A Female 49.6
Sample B Female 43.0
Sample C Male 40.9
Sample D Male 44.8
Putamen
nTPM: 41.8
Samples: 4

Max nTPM: 55.3
Min nTPM: 33.6
Sample A Female 55.3
Sample B Female 33.6
Sample C Male 36.8
Sample D Male 41.5
Septum
nTPM: 60.4
Samples: 4

Max nTPM: 68.0
Min nTPM: 50.7
Sample A Female 67.3
Sample B Female 50.7
Sample C Male 68.0
Sample D Male 55.6
Ventral pallidum
nTPM: 48.6
Samples: 4

Max nTPM: 51.0
Min nTPM: 46.2
Sample A Female 51.0
Sample B Female 49.6
Sample C Male 46.2
Sample D Male 47.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

62.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 42.7
Samples: 4

Max nTPM: 47.4
Min nTPM: 37.3
Sample A Male 45.3
Sample B Male 40.6
Sample C Female 37.3
Sample D Female 47.4
Septum
nTPM: 62.6
Samples: 4

Max nTPM: 65.3
Min nTPM: 60.2
Sample A Male 65.3
Sample B Male 63.2
Sample C Female 61.5
Sample D Female 60.2
Ventral forebrain
nTPM: 57.4
Samples: 4

Max nTPM: 63.7
Min nTPM: 50.5
Sample A Male 59.4
Sample B Male 56.0
Sample C Female 63.7
Sample D Female 50.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.1
76115739 Antisense, RP_060620_02_C07, Mouse strain C57BL/6J (56 days, male) 4.1
69816715 Antisense, RP_050510_01_G02, Mouse strain C57BL/6J (56 days, male) 2.0
Pallidum
Expression energy: 3.9
76115739 Antisense, RP_060620_02_C07, Mouse strain C57BL/6J (56 days, male) 5.5
69816715 Antisense, RP_050510_01_G02, Mouse strain C57BL/6J (56 days, male) 2.3

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