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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:135.5 nTPM
FANTOM5:85.9 Scaled Tags Per Million
Pig:59.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA021241Antibody HPA024031Antibody CAB003681Antibody CAB068216
Glial cells HighHighHighHigh
Neuronal cells LowNot detected-Low








CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

135.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 135.5
Samples: 246

Max nTPM: 314.5
Min nTPM: 20.5
Std nTPM: 52.4
Median nTPM: 126.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 314.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 298.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 283.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 280.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 279.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 267.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 265.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 263.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 252.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 252.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 251.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 251.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 244.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 244.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 234.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 233.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 228.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 228.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 227.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 224.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 224.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 221.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 216.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 214.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 213.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 213.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 213.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 202.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 196.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 194.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 193.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 193.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 191.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 191.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 190.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 189.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 188.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 186.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 184.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 181.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 180.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 179.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 179.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 179.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 179.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 177.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 177.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 176.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 173.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 172.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 168.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 168.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 167.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 167.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 166.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 166.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 165.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 164.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 164.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 163.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 163.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 162.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 162.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 162.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 161.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 160.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 158.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 157.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 157.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 155.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 155.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 155.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 155.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 154.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 152.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 151.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 148.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 148.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 147.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 147.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 147.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 146.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 146.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 146.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 146.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 144.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 144.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 143.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 143.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 142.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 141.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 141.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 141.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 140.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 140.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 140.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 140.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 138.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 138.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 138.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 138.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 137.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 137.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 137.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 135.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 134.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 133.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 133.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 132.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 132.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 132.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 132.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 131.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 131.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 131.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 131.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 130.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 130.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 129.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 129.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 129.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 128.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 127.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 125.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 125.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 125.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 124.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 124.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 124.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 123.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 122.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 121.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 121.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 121.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 120.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 120.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 120.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 120.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 120.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 119.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 119.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 119.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 118.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 118.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 117.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 117.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 117.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 116.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 116.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 115.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 113.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 113.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 112.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 112.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 111.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 111.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 111.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 111.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 108.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 108.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 107.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 106.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 106.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 105.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 105.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 104.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 104.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 104.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 104.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 104.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 103.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 103.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 103.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 102.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 102.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 102.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 101.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 101.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 101.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 100.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 99.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 99.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 98.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 98.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 97.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 97.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 97.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 96.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 96.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 96.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 95.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 95.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 94.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 93.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 93.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 93.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 92.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 91.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 90.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 90.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 90.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 90.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 89.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 89.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 88.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 88.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 88.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 87.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 86.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 85.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 85.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 85.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 85.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 85.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 84.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 83.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 83.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 82.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 81.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 81.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 81.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 80.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 78.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 78.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 77.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 76.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 74.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 72.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 72.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 71.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 70.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 69.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 66.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 64.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 64.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 64.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 62.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 61.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 61.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 59.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 57.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 55.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 52.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 50.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 32.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 20.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

85.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 85.9
FF:10164-103B2 76 years, female 85.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.9
Pig sample Sample description nTPM
Caudate
nTPM: 59.9
Samples: 4

Max nTPM: 81.2
Min nTPM: 46.8
Sample A Female 46.8
Sample B Female 58.8
Sample C Male 81.2
Sample D Male 52.8

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