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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:88.2 nTPM
HPA Brain:93.6 nTPM
GTEx:88.2 nTPM
FANTOM5:107.5 Scaled Tags Per Million
Pig:32.0 nTPM
Mouse:55.1 nTPM
Allen mouse:0.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA021616Antibody CAB004035Antibody CAB047324Antibody CAB075739
Glial cells HighMediumHighLow
Neuronal cells Not detectedNot detectedMediumNot detected









BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 93.6
2481 Female, age 94, left hemisphere 177.2
2289 Male, age 61, right hemisphere 118.5
2290 Female, age 72, unknown 100.3
1857 Female, age 85, left hemisphere 96.9
2288 Male, age 75, left hemisphere 79.6
1854 Male, age 80, left hemisphere 74.8
1781 Male, age 74, unknown 53.5
2846 Female, age 79, unknown 47.9
Globus pallidus, externus
nTPM: 67.7
2646 Male, age 61, right hemisphere 96.1
1996 Male, age 80, right hemisphere 73.3
2772 Female, age 79, unknown 65.4
2395 Male, age 75, both hemispheres 58.8
2567 Female, age 72, unknown 45.1
Globus pallidus, internus
nTPM: 61.5
2483 Female, age 94, right hemisphere 103.9
1818 Male, age 74, unknown 64.0
2287 Male, age 75, right hemisphere 62.8
2037 Male, age 80, right hemisphere 61.1
2111 Female, age 85, right hemisphere 54.4
2778 Female, age 91, both hemispheres 45.4
2566 Female, age 72, unknown 39.1
Nucleus accumbens
nTPM: 71.7
2286 Male, age 75, left hemisphere 91.1
2391 Female, age 94, left hemisphere 90.5
1806 Female, age 85, left hemisphere 83.0
2732 Male, age 80, right hemisphere 80.2
2824 Male, age 61, right hemisphere 60.7
2698 Female, age 72, unknown 58.9
1856 Female, age 91, right hemisphere 54.9
1783 Male, age 74, unknown 54.5
Nucleus basalis of Meynert
nTPM: 69.0
2569 Male, age 61, both hemispheres 107.6
2484 Female, age 94, left hemisphere 67.8
2393 Male, age 80, right hemisphere 56.8
2821 Male, age 75, both hemispheres 44.0
Nucleus of the diagonal band
nTPM: 58.2
1979 Male, age 74, unknown 78.4
1812 Female, age 91, both hemispheres 66.9
2195 Female, age 85, both hemispheres 55.7
2775 Male, age 80, right hemisphere 52.1
2029 Male, age 61, right hemisphere 37.8
Putamen
nTPM: 70.0
2482 Female, age 94, left hemisphere 113.7
2647 Male, age 75, left hemisphere 80.4
2489 Female, age 72, unknown 74.1
1829 Male, age 74, unknown 63.0
1937 Female, age 91, right hemisphere 55.1
1838 Male, age 80, right hemisphere 55.0
2466 Female, age 79, unknown 48.3
Septal nuclei
nTPM: 65.4
2199 Male, age 80, right hemisphere 84.8
2059 Female, age 85, both hemispheres 83.3
2009 Female, age 91, both hemispheres 67.7
2629 Female, age 94, right hemisphere 64.5
2394 Male, age 61, left hemisphere 56.0
1960 Male, age 74, unknown 54.6
2031 Female, age 72, unknown 47.0
Stria terminalis, bed nucleus
nTPM: 51.5
2486 Female, age 94, both hemispheres 57.0
2201 Male, age 74, unknown 51.9
1974 Female, age 91, both hemispheres 45.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

88.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 88.2
Samples: 246

Max nTPM: 210.6
Min nTPM: 11.1
Std nTPM: 33.8
Median nTPM: 83.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 210.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 197.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 184.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 172.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 165.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 164.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 163.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 159.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 157.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 155.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 153.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 150.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 150.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 149.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 147.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 144.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 144.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 143.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 141.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 141.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 137.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 134.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 134.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 134.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 133.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 133.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 132.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 131.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 131.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 130.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 128.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 126.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 124.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 124.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 124.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 123.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 122.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 122.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 122.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 122.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 121.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 121.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 121.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 121.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 119.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 117.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 116.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 115.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 115.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 112.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 112.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 112.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 111.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 110.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 110.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 110.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 110.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 109.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 109.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 108.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 107.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 106.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 105.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 105.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 105.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 105.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 105.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 104.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 104.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 104.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 103.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 103.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 103.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 103.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 102.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 102.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 100.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 100.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 97.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 97.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 96.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 96.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 96.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 96.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 96.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 95.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 95.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 95.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 95.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 95.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 94.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 94.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 94.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 93.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 93.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 93.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 92.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 92.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 92.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 91.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 90.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 89.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 89.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 88.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 88.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 88.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 88.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 88.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 88.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 88.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 87.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 87.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 87.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 86.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 85.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 85.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 85.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 84.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 84.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 84.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 84.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 84.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 84.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 83.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 83.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 83.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 83.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 82.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 82.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 82.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 82.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 82.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 81.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 81.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 81.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 81.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 81.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 80.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 79.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 79.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 79.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 79.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 79.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 78.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 78.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 78.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 77.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 77.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 77.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 76.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 76.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 76.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 76.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 75.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 75.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 75.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 74.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 74.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 74.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 74.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 73.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 73.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 72.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 72.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 72.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 72.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 72.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 71.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 71.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 71.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 71.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 71.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 70.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 70.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 70.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 69.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 69.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 69.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 69.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 68.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 68.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 68.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 68.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 68.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 67.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 67.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 67.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 67.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 66.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 66.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 66.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 65.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 65.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 64.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 62.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 62.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 61.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 61.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 61.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 61.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 61.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 61.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 60.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 60.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 59.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 59.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 59.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 58.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 58.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 57.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 57.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 56.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 55.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 54.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 52.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 52.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 51.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 51.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 50.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 49.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 48.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 47.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 45.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 43.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 43.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 42.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 41.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 39.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 39.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 37.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 37.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 37.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 37.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 35.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 33.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 33.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 33.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 32.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 29.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 28.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 26.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 21.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 20.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 20.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 12.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 11.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 59.7
Samples: 246

Max nTPM: 128.4
Min nTPM: 4.2
Std nTPM: 26.2
Median nTPM: 58.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 128.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 126.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 124.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 121.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 116.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 116.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 115.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 115.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 112.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 111.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 110.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 110.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 108.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 106.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 106.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 106.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 105.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 102.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 101.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 101.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 99.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 99.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 97.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 96.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 96.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 95.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 94.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 93.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 93.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 93.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 92.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 91.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 90.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 89.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 89.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 88.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 88.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 88.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 87.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 86.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 86.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 86.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 85.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 84.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 83.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 81.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 81.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 81.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 81.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 81.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 80.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 79.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 79.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 78.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 78.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 78.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 78.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 78.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 77.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 76.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 76.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 76.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 75.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 75.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 75.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 75.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 74.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 73.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 73.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 73.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 72.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 72.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 72.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 72.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 71.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 71.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 70.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 70.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 70.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 69.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 69.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 69.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 68.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 68.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 67.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 67.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 67.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 67.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 66.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 66.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 66.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 65.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 65.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 65.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 65.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 64.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 64.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 64.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 64.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 64.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 63.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 63.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 63.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 63.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 62.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 62.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 61.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 61.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 61.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 61.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 61.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 61.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 60.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 60.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 60.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 60.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 60.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 59.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 59.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 59.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 59.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 59.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 58.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 58.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 57.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 57.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 57.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 56.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 56.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 56.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 56.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 55.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 55.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 55.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 55.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 55.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 55.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 55.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 55.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 54.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 54.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 54.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 54.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 54.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 53.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 53.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 52.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 51.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 51.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 51.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 51.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 51.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 51.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 50.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 50.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 49.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 49.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 49.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 49.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 49.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 49.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 49.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 48.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 48.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 48.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 47.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 47.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 46.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 46.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 46.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 46.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 45.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 45.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 44.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 44.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 43.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 43.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 43.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 42.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 42.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 42.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 41.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 41.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 40.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 40.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 39.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 39.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 38.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 37.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 36.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 36.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 36.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 36.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 36.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 35.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 35.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 34.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 34.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 34.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 34.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 33.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 33.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 33.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 32.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 32.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 32.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 31.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 31.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 31.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 30.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 30.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 29.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 29.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 29.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 28.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 28.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 28.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 27.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 27.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 26.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 26.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 25.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 24.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 24.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 23.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 23.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 22.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 22.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 22.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 20.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 20.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 20.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 20.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 19.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 18.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 18.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 17.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 17.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 16.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 15.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 14.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 14.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 10.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 10.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 10.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 4.2
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Brain - Putamen (basal ganglia)
Average nTPM: 66.8
Samples: 205

Max nTPM: 156.6
Min nTPM: 6.8
Std nTPM: 27.9
Median nTPM: 64.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 156.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 138.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 135.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 132.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 130.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 127.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 123.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 121.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 121.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 119.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 116.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 114.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 113.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 113.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 112.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 111.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 110.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 110.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 110.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 108.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 106.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 105.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 103.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 103.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 103.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 102.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 101.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 100.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 98.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 98.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 98.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 97.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 97.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 96.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 96.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 93.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 92.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 92.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 91.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 91.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 90.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 89.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 88.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 86.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 86.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 85.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 85.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 85.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 82.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 82.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 82.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 82.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 82.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 81.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 81.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 81.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 81.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 81.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 81.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 79.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 79.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 79.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 78.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 78.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 77.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 77.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 77.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 76.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 76.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 76.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 75.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 75.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 75.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 74.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 73.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 73.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 72.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 72.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 72.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 72.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 70.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 70.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 69.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 69.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 68.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 68.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 67.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 67.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 67.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 66.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 66.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 66.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 66.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 66.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 66.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 66.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 65.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 65.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 65.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 65.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 65.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 64.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 64.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 63.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 63.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 63.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 62.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 62.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 62.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 61.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 61.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 61.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 60.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 60.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 60.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 60.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 60.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 59.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 59.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 58.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 58.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 58.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 58.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 57.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 57.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 57.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 57.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 57.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 55.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 55.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 54.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 54.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 54.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 53.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 53.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 52.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 52.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 52.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 52.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 52.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 51.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 51.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 51.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 51.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 50.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 49.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 49.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 49.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 49.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 49.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 48.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 48.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 48.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 47.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 47.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 47.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 46.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 46.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 46.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 46.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 45.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 44.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 44.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 44.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 41.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 41.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 41.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 40.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 40.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 40.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 40.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 40.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 40.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 40.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 39.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 38.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 38.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 37.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 36.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 36.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 35.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 35.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 34.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 33.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 33.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 32.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 32.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 31.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 30.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 29.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 28.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 26.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 26.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 25.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 25.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 21.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 19.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 19.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 19.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 18.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 16.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 15.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 15.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 8.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 6.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

107.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 105.4
FF:10164-103B2 76 years, female 105.4
Nucleus accumbens
Scaled Tags Per Million: 106.1
FF:10037-101F1 23-56 years, mixed 106.1
Putamen
Scaled Tags Per Million: 107.5
FF:10176-103C5 60 years, female 107.5
Globus pallidus
Scaled Tags Per Million: 66.3
FF:10161-103A8 76 years, female 83.9
FF:10175-103C4 60 years, female 48.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

32.0
Pig sample Sample description nTPM
Caudate
nTPM: 32.0
Samples: 4

Max nTPM: 38.6
Min nTPM: 26.0
Sample A Female 30.9
Sample B Female 32.6
Sample C Male 38.6
Sample D Male 26.0
Putamen
nTPM: 28.9
Samples: 4

Max nTPM: 39.4
Min nTPM: 23.2
Sample A Female 23.2
Sample B Female 24.3
Sample C Male 39.4
Sample D Male 28.6
Septum
nTPM: 31.4
Samples: 4

Max nTPM: 40.9
Min nTPM: 27.6
Sample A Female 29.1
Sample B Female 27.6
Sample C Male 28.1
Sample D Male 40.9
Ventral pallidum
nTPM: 25.3
Samples: 4

Max nTPM: 29.1
Min nTPM: 23.4
Sample A Female 23.4
Sample B Female 29.1
Sample C Male 23.5
Sample D Male 25.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 50.3
Samples: 4

Max nTPM: 58.1
Min nTPM: 45.7
Sample A Male 47.2
Sample B Male 45.7
Sample C Female 50.3
Sample D Female 58.1
Septum
nTPM: 55.1
Samples: 4

Max nTPM: 67.6
Min nTPM: 37.8
Sample A Male 37.8
Sample B Male 59.9
Sample C Female 67.6
Sample D Female 55.1
Ventral forebrain
nTPM: 41.4
Samples: 4

Max nTPM: 50.6
Min nTPM: 32.8
Sample A Male 37.7
Sample B Male 32.8
Sample C Female 50.6
Sample D Female 44.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.4
2716 Antisense, RP_Baylor_103103, Mouse strain C57BL/6J (56 days, male) 0.4
2715 Antisense, RP_Baylor_103103, Mouse strain C57BL/6J (56 days, male) 0.3
Pallidum
Expression energy: 0.5
2716 Antisense, RP_Baylor_103103, Mouse strain C57BL/6J (56 days, male) 0.5
2715 Antisense, RP_Baylor_103103, Mouse strain C57BL/6J (56 days, male) 0.2

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