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DPYSL2
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  • DPYSL2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:141.8 nTPM
FANTOM5:667.4 Scaled Tags Per Million
Pig:390.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002381Antibody CAB018719
Glial cells MediumHigh
Neuronal cells LowLow





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

141.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 141.8
Samples: 246

Max nTPM: 365.7
Min nTPM: 84.4
Std nTPM: 36.8
Median nTPM: 133.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 365.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 269.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 262.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 248.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 242.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 235.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 234.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 229.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 225.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 222.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 222.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 220.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 217.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 207.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 206.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 199.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 198.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 195.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 195.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 193.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 193.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 192.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 191.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 189.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 188.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 187.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 184.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 184.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 184.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 182.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 181.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 177.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 177.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 175.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 175.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 175.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 173.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 173.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 172.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 171.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 170.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 169.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 169.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 167.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 167.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 166.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 164.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 164.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 164.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 161.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 161.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 161.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 159.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 159.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 159.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 159.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 159.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 158.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 158.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 157.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 157.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 156.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 156.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 155.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 155.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 155.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 155.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 155.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 154.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 154.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 154.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 154.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 154.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 153.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 153.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 153.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 153.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 153.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 153.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 153.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 152.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 151.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 150.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 149.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 149.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 149.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 148.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 148.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 148.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 147.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 147.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 147.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 147.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 147.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 146.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 146.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 145.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 145.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 144.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 144.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 143.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 142.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 142.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 141.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 141.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 141.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 141.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 140.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 140.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 139.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 139.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 138.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 138.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 138.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 138.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 137.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 137.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 134.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 134.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 134.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 134.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 133.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 133.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 133.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 132.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 131.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 131.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 131.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 130.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 130.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 130.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 129.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 129.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 129.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 129.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 128.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 128.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 128.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 127.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 127.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 127.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 126.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 126.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 125.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 125.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 125.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 125.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 124.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 124.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 124.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 123.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 123.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 123.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 123.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 122.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 122.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 122.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 122.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 122.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 121.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 121.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 121.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 121.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 121.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 121.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 121.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 120.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 120.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 120.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 120.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 120.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 120.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 120.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 120.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 120.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 119.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 119.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 119.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 119.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 118.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 118.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 118.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 118.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 118.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 118.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 117.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 117.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 117.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 117.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 116.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 116.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 116.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 116.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 115.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 114.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 114.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 114.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 113.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 113.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 112.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 112.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 112.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 110.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 110.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 110.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 109.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 109.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 109.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 109.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 108.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 107.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 107.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 107.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 107.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 107.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 106.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 106.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 105.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 105.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 103.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 103.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 102.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 102.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 102.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 102.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 101.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 101.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 101.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 101.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 100.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 100.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 100.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 100.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 99.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 99.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 98.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 97.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 97.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 97.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 96.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 94.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 93.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 93.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 90.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 87.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 84.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

667.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 667.4
FF:10164-103B2 76 years, female 667.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

390.6
Pig sample Sample description nTPM
Caudate
nTPM: 390.6
Samples: 4

Max nTPM: 442.7
Min nTPM: 350.3
Sample A Female 350.3
Sample B Female 386.1
Sample C Male 442.7
Sample D Male 383.4

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