HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:42.3 nTPM
HPA Brain:51.5 nTPM
GTEx:42.3 nTPM
FANTOM5:85.2 Scaled Tags Per Million
Pig:62.3 nTPM
Mouse:68.6 nTPM
Allen mouse:4.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037573
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 51.5
Sample id Sample description nTPM
Hippocampus
nTPM: 48.8
1898 Male, age 80, left hemisphere 53.5
2621 Female, age 67, right hemisphere 51.2
2529 Female, age 94, left hemisphere 49.7
1855 Male, age 76, left hemisphere 48.7
1911 Female, age 85, right hemisphere 45.8
2148 Female, age 91, left hemisphere 43.6
Dentate gyrus
nTPM: 48.6
2010 Male, age 76, both hemispheres 55.9
2530 Female, age 94, left hemisphere 52.1
1927 Female, age 91, both hemispheres 49.2
2246 Female, age 85, both hemispheres 47.9
2528 Male, age 74, both hemispheres 45.8
2531 Female, age 67, both hemispheres 40.6
Entorhinal gyrus
nTPM: 46.2
1938 Female, age 85, left hemisphere 51.1
2117 Female, age 91, right hemisphere 50.6
1787 Male, age 76, left hemisphere 48.7
2764 Male, age 80, right hemisphere 47.2
2613 Female, age 94, left hemisphere 40.1
2686 Male, age 75, right hemisphere 39.5
Hippocampus, CA1
nTPM: 51.5
2749 Male, age 80, left hemisphere 63.1
1873 Female, age 85, both hemispheres 53.7
2527 Male, age 74, both hemispheres 51.6
2045 Male, age 76, both hemispheres 48.3
2082 Female, age 91, right hemisphere 40.6
Hippocampus, CA2
nTPM: 49.8
1892 Male, age 76, both hemispheres 57.6
1963 Male, age 80, left hemisphere 54.4
2249 Male, age 74, both hemispheres 51.8
1940 Female, age 85, left hemisphere 45.8
2113 Female, age 91, right hemisphere 44.8
2437 Female, age 94, left hemisphere 44.5
Hippocampus, CA3
nTPM: 49.6
2436 Male, age 74, both hemispheres 56.1
2137 Male, age 80, left hemisphere 54.2
1867 Male, age 76, both hemispheres 53.4
1891 Female, age 85, both hemispheres 51.7
2620 Female, age 94, left hemisphere 41.3
2861 Female, age 67, both hemispheres 40.8
Parahippocampal cortex
nTPM: 47.1
1850 Male, age 80, both hemispheres 53.7
2250 Female, age 67, right hemisphere 50.5
1990 Female, age 91, right hemisphere 48.9
2245 Female, age 91, both hemispheres 48.7
2532 Female, age 72, left hemisphere 48.3
2692 Male, age 74, both hemispheres 47.7
2018 Male, age 76, both hemispheres 46.9
1933 Female, age 85, both hemispheres 45.4
2693 Female, age 94, both hemispheres 42.9
2622 Female, age 67, right hemisphere 38.2
Perirhinal gyrus
nTPM: 51.1
1841 Female, age 85, right hemisphere 56.9
1847 Female, age 91, left hemisphere 52.2
1794 Male, age 80, right hemisphere 51.7
2848 Male, age 76, right hemisphere 48.1
2521 Female, age 94, right hemisphere 46.5
Subiculum
nTPM: 50.7
2042 Male, age 76, both hemispheres 56.6
1977 Female, age 85, both hemispheres 52.6
1901 Male, age 80, both hemispheres 51.0
2438 Female, age 94, left hemisphere 50.5
2619 Male, age 74, both hemispheres 50.5
2729 Female, age 91, right hemisphere 43.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 42.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.3
Samples: 197

Max nTPM: 72.0
Min nTPM: 26.0
Std nTPM: 7.3
Median nTPM: 41.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 72.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 64.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 64.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 62.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 58.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 58.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 56.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 56.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 55.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 55.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 55.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 85.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 85.2
FF:10169-103B7 60 years, female 87.2
FF:10153-102I9 76 years, female 83.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 62.3
Pig sample Sample description nTPM
Subiculum
nTPM: 52.4
Samples: 4

Max nTPM: 63.8
Min nTPM: 45.3
Sample A Female 63.8
Sample B Female 48.3
Sample C Male 45.3
Sample D Male 52.0
Dorsal hippocampus
nTPM: 62.3
Samples: 4

Max nTPM: 74.7
Min nTPM: 50.6
Sample A Female 74.7
Sample B Female 65.3
Sample C Male 58.6
Sample D Male 50.6
Entorhinal cortex
nTPM: 52.9
Samples: 4

Max nTPM: 61.7
Min nTPM: 46.3
Sample A Female 51.8
Sample B Female 61.7
Sample C Male 51.8
Sample D Male 46.3
Ventral hippocampus
nTPM: 53.5
Samples: 4

Max nTPM: 60.8
Min nTPM: 44.6
Sample A Female 60.8
Sample B Female 44.6
Sample C Male 50.1
Sample D Male 58.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 68.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.1
Samples: 4

Max nTPM: 65.5
Min nTPM: 62.5
Sample A Male 63.2
Sample B Male 62.5
Sample C Female 65.1
Sample D Female 65.5
Hippocampal formation
nTPM: 68.6
Samples: 4

Max nTPM: 71.8
Min nTPM: 65.2
Sample A Male 67.2
Sample B Male 70.3
Sample C Female 71.8
Sample D Female 65.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.2
583567 Antisense, RP_040831_02_C09, Mouse strain C57BL/6J (56 days, male) 4.2

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